| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187928751
Identifier: 187928751
GI number: 187928751
Start: 1753850
End: 1754269
Strand: Reverse
Name: 187928751
Synonym: Rpic_1668
Alternate gene names: NA
Gene position: 1754269-1753850 (Counterclockwise)
Preceding gene: 187928753
Following gene: 187928747
Centisome position: 44.5
GC content: 56.9
Gene sequence:
>420_bases ATGCGCTCTCTTCCTTCCGCACTGCAGATGCGCACCATGAGCACAATGCTGGTCATGTCCCTCGCCGGTTGCTCGACTAT CTATGAAGGCAAATATGCCTACGACGAGGGATGGAGACTCGGAGAAATCGAAAAGATTGGTGCACCAGCGGATCTGGGGC GGTTCGGAGCGCTGTGCCGCCAAAGGCGAGACCTGTCTGCAGCGTATCCTCCGGTTGCTGTCGTAAGGTTCGACTTCGGA ACCACGGCCGGCAGATATATGCATAGCAGCCATAAACTGCAACACGTGGTGGTGCAACTGCCTCTCGACAGCCCGTTGAA AAAGGACGCGCACGTATACGTGAACATCCGGGATTGCGAGCAACCCCTTGTCCCCGTTGGCAAACTGGACTCAAAACCGC TTCAGCTACCCGGCGCGTGA
Upstream 100 bases:
>100_bases GGGCAGGACTTTTCAAGTATGCGCTATGCCTATCGAACAGGTTCGTGGCCATAGGTCCAAATGGAGTATCAAGAGGCAGA TGATGGTAGGAGTTCTCAGA
Downstream 100 bases:
>100_bases GGCAAGATGTATGTAGGCTGTTGGCCTAGCCTCATCCCGTCACCAGCCCAGCGATCCGCACCAGCACCAGTCCAGCGGCC ACCACGAGATAAGCCCGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MRSLPSALQMRTMSTMLVMSLAGCSTIYEGKYAYDEGWRLGEIEKIGAPADLGRFGALCRQRRDLSAAYPPVAVVRFDFG TTAGRYMHSSHKLQHVVVQLPLDSPLKKDAHVYVNIRDCEQPLVPVGKLDSKPLQLPGA
Sequences:
>Translated_139_residues MRSLPSALQMRTMSTMLVMSLAGCSTIYEGKYAYDEGWRLGEIEKIGAPADLGRFGALCRQRRDLSAAYPPVAVVRFDFG TTAGRYMHSSHKLQHVVVQLPLDSPLKKDAHVYVNIRDCEQPLVPVGKLDSKPLQLPGA >Mature_139_residues MRSLPSALQMRTMSTMLVMSLAGCSTIYEGKYAYDEGWRLGEIEKIGAPADLGRFGALCRQRRDLSAAYPPVAVVRFDFG TTAGRYMHSSHKLQHVVVQLPLDSPLKKDAHVYVNIRDCEQPLVPVGKLDSKPLQLPGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15360; Mature: 15360
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSLPSALQMRTMSTMLVMSLAGCSTIYEGKYAYDEGWRLGEIEKIGAPADLGRFGALCR CCCCCHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHH QRRDLSAAYPPVAVVRFDFGTTAGRYMHSSHKLQHVVVQLPLDSPLKKDAHVYVNIRDCE HHHCCCCCCCCEEEEEECCCCCCCHHHHCCCCEEEEEEECCCCCCCCCCCEEEEEEECCC QPLVPVGKLDSKPLQLPGA CCCCCCCCCCCCCEECCCC >Mature Secondary Structure MRSLPSALQMRTMSTMLVMSLAGCSTIYEGKYAYDEGWRLGEIEKIGAPADLGRFGALCR CCCCCHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHH QRRDLSAAYPPVAVVRFDFGTTAGRYMHSSHKLQHVVVQLPLDSPLKKDAHVYVNIRDCE HHHCCCCCCCCEEEEEECCCCCCCHHHHCCCCEEEEEEECCCCCCCCCCCEEEEEEECCC QPLVPVGKLDSKPLQLPGA CCCCCCCCCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA