| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187928655
Identifier: 187928655
GI number: 187928655
Start: 1660123
End: 1660611
Strand: Direct
Name: 187928655
Synonym: Rpic_1571
Alternate gene names: NA
Gene position: 1660123-1660611 (Clockwise)
Preceding gene: 187928642
Following gene: 187928656
Centisome position: 42.11
GC content: 61.96
Gene sequence:
>489_bases ATGCGAGAAGTTGAAATAGGCGGCCGCCCAAAGGCCGAACCCTGCTCCCAGTTTGGGGAGGCTGAAGACCAGGCACTGGC CAGCATTGAGGCGCAGGCCTTCGCGCGCATGCTGGATCGCGTCTTCTGGTTCCCGGAGCCGCATGTGCTGCGGTTCGAGG CGCGCGTGCATTCGGATTCGCAAGGCATACACCACACTGTGGTGGGGGTTGTTGGGCACGGCGGCGAAGCGTGGTTCAGC GAGGACCTCATTCCAGCTCGTTGGGACTATGTGGCGTTCAAGGAGATTGGCTGGAGCGTCTCCAAGCTACTACGCAACAA GCTCATCGCTGACGGCGTGCTTCGTGAGGACGCACCGGGCCTGCTGGCGGGGTTGATGCCAGACTTCTCAGGGATGCAAG AACCAGAGGAGAAGGACCACTATCGCTGGGCCGTCGTCAATCGCTTGCGGAGCGCTGCAATGACGCGGCCGATGCCAGGA AGGTGGTAG
Upstream 100 bases:
>100_bases CTGGCCGGTACGATTTTGGGGCGGGCAACGACGATCGAATCAAGCAAAAGCTCGATATTCGCGTGGGCTTTCGCCGCATT CCCACACCACAGCACACGAC
Downstream 100 bases:
>100_bases CGGGCTGGGCGCGCGTGCGCGCAGCTTGTTGGCTCAGCGAAGAAAATTAGAAAGTAGCGAAGTAGGCTAGAAAATATCGA AGCGGGAACGGATACGTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MREVEIGGRPKAEPCSQFGEAEDQALASIEAQAFARMLDRVFWFPEPHVLRFEARVHSDSQGIHHTVVGVVGHGGEAWFS EDLIPARWDYVAFKEIGWSVSKLLRNKLIADGVLREDAPGLLAGLMPDFSGMQEPEEKDHYRWAVVNRLRSAAMTRPMPG RW
Sequences:
>Translated_162_residues MREVEIGGRPKAEPCSQFGEAEDQALASIEAQAFARMLDRVFWFPEPHVLRFEARVHSDSQGIHHTVVGVVGHGGEAWFS EDLIPARWDYVAFKEIGWSVSKLLRNKLIADGVLREDAPGLLAGLMPDFSGMQEPEEKDHYRWAVVNRLRSAAMTRPMPG RW >Mature_162_residues MREVEIGGRPKAEPCSQFGEAEDQALASIEAQAFARMLDRVFWFPEPHVLRFEARVHSDSQGIHHTVVGVVGHGGEAWFS EDLIPARWDYVAFKEIGWSVSKLLRNKLIADGVLREDAPGLLAGLMPDFSGMQEPEEKDHYRWAVVNRLRSAAMTRPMPG RW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18311; Mature: 18311
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MREVEIGGRPKAEPCSQFGEAEDQALASIEAQAFARMLDRVFWFPEPHVLRFEARVHSDS CCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCC QGIHHTVVGVVGHGGEAWFSEDLIPARWDYVAFKEIGWSVSKLLRNKLIADGVLREDAPG CCCHHHEEEEECCCCCHHHCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCH LLAGLMPDFSGMQEPEEKDHYRWAVVNRLRSAAMTRPMPGRW HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MREVEIGGRPKAEPCSQFGEAEDQALASIEAQAFARMLDRVFWFPEPHVLRFEARVHSDS CCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCC QGIHHTVVGVVGHGGEAWFSEDLIPARWDYVAFKEIGWSVSKLLRNKLIADGVLREDAPG CCCHHHEEEEECCCCCHHHCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCH LLAGLMPDFSGMQEPEEKDHYRWAVVNRLRSAAMTRPMPGRW HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA