Click here to switch to the map view.

The map label for this gene is 187928608

Identifier: 187928608

GI number: 187928608

Start: 1617292

End: 1617636

Strand: Reverse

Name: 187928608

Synonym: Rpic_1524

Alternate gene names: NA

Gene position: 1617636-1617292 (Counterclockwise)

Preceding gene: 187928609

Following gene: 187928607

Centisome position: 41.03

GC content: 60.0

Gene sequence:

>345_bases
ATGATCCAAGCAGTCCAGCGCCTGCTCAAACGCGCAACCACCTGGCGCGGCACGGTGGCACAAGCCGTTGCCATCACCAC
CCTGCTCTATGGGGCGGAGGCCCGCGCCGACGAATTGGCCTCTCTGTCCGGTTTCGTTTGCATGATCGCGAACTTCGTCA
AGAGCGGCTACCTGCTCGCGGGCGGCGTGATTGTGATCGTGATCGGTGCAATCGCCATCGCGCAGTCCGAATCCACCATC
GTCAAATTCGTCTCGACGATTGGTATCGGTATCGGCATTGCAGCGGCTTGTATCCCGCTGCTGCAGAAGTTCGGCATCTC
CGCCACGTACTGCACGTTCGTCTAA

Upstream 100 bases:

>100_bases
GCGCACGGGCGAGATGCGGCACGTCTCCGAGATTCTGGAGATCCAGGGCTACGCAAACAACGACTACGTCATCAAACGTG
TTTTCTAAGGGGGTTTCATC

Downstream 100 bases:

>100_bases
CCATGCGCCAGCACAAGGTTAGTCGCTCGCTGTCACTGCCTCGCATGATCGGTGGTGTCGTGCGTGGCTTCGCCATTGCC
AACGGCACGCTCACCGCAGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MIQAVQRLLKRATTWRGTVAQAVAITTLLYGAEARADELASLSGFVCMIANFVKSGYLLAGGVIVIVIGAIAIAQSESTI
VKFVSTIGIGIGIAAACIPLLQKFGISATYCTFV

Sequences:

>Translated_114_residues
MIQAVQRLLKRATTWRGTVAQAVAITTLLYGAEARADELASLSGFVCMIANFVKSGYLLAGGVIVIVIGAIAIAQSESTI
VKFVSTIGIGIGIAAACIPLLQKFGISATYCTFV
>Mature_114_residues
MIQAVQRLLKRATTWRGTVAQAVAITTLLYGAEARADELASLSGFVCMIANFVKSGYLLAGGVIVIVIGAIAIAQSESTI
VKFVSTIGIGIGIAAACIPLLQKFGISATYCTFV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11839; Mature: 11839

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQAVQRLLKRATTWRGTVAQAVAITTLLYGAEARADELASLSGFVCMIANFVKSGYLLA
CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHH
GGVIVIVIGAIAIAQSESTIVKFVSTIGIGIGIAAACIPLLQKFGISATYCTFV
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCC
>Mature Secondary Structure
MIQAVQRLLKRATTWRGTVAQAVAITTLLYGAEARADELASLSGFVCMIANFVKSGYLLA
CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHH
GGVIVIVIGAIAIAQSESTIVKFVSTIGIGIGIAAACIPLLQKFGISATYCTFV
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA