| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187928598
Identifier: 187928598
GI number: 187928598
Start: 1607192
End: 1608058
Strand: Reverse
Name: 187928598
Synonym: Rpic_1514
Alternate gene names: NA
Gene position: 1608058-1607192 (Counterclockwise)
Preceding gene: 187928599
Following gene: 187928597
Centisome position: 40.79
GC content: 60.21
Gene sequence:
>867_bases ATGCAGAACACGATCGATAAGGTTGCAGGCGCCGACAACTCCGACGTTGCCGTGACGACGAACGGGGATACCCTTCCCAA CGATGAAGTTGAATCCAGCGCCGCAGCGAATACGGCAGGCGCAACAACACCGTCCGACGTTGAACAAGAACTCAACGAGA TGGAGAGCGCGGTCGATGCGCTGCAGCGCGACAGTCTGATCTCGGCGGCCGACGCGGACAGCCAGAAGGGCGAGGTTGCG CGCACCCGCAAAATGTTCCGCGAAATGTCGCCGGATGATCGCGCCAAGATCGTGTCCCGCCGGCGCGAACTGGGGCGCCA GATCCTGACCCGTCAGCTCGCGGGTGCGTCTGTTGTCGAGACTATGGTCAAACTCAACCACACGCGCCTCAAGCCCCTGT TCGAGCAGTGGTGGCCGTTCATGAACCGGATGACCATCAACCTGACCCGCTTCGGACACAGCACGTTCACCGCGTCGGAG CTGTCGACCATCACAAAGCACTTCGAGACACAAATGGCCAATCTGGAAGCCTACGTCGATGAGCAGCTGCGCGTCGCCGA GGGCTATCGCGCAGCACGCGAGAAGGACATGGAATCCAGCGGCGCAATGATCTGGAAGCCGTCGGTCACAAAGCCGTCGA TGGAGATGGTGGTCGAAGCATACTCGCCCTTCTCGATGCGGGCTCTGGGCGTGCTGAACAAGTTCGACCGGGCCATGGAT CACTTCGACTTCATGGTGTGGAACGCCATCCGCGATCAGTCGGACGTGAACGAGGAAGTGAATCGCTTCCTGCGCAAGTT CCAACCGCTGGCCATTCGTTGCTACACGACGCACCTGCGTCTGATGACCACCGTGCGCAACATCTGA
Upstream 100 bases:
>100_bases TCGGCTGGCGGATGGCTGCATCGTTTCACGTAGGCCGATAGCCGCGTTTCATTCCGTCCCACTGGCGCCCATTTTGGGAG CAAATTTTAAGGAGCACACC
Downstream 100 bases:
>100_bases TCTGAGCGCGCTCGTGCCCTGCCGGACGACCTCCGCCGTATCTTCACCTGTTGGTGGCGGTACGGCGTACGCATCGGCAC AGAGGGTTCCGCCGGCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 288; Mature: 288
Protein sequence:
>288_residues MQNTIDKVAGADNSDVAVTTNGDTLPNDEVESSAAANTAGATTPSDVEQELNEMESAVDALQRDSLISAADADSQKGEVA RTRKMFREMSPDDRAKIVSRRRELGRQILTRQLAGASVVETMVKLNHTRLKPLFEQWWPFMNRMTINLTRFGHSTFTASE LSTITKHFETQMANLEAYVDEQLRVAEGYRAAREKDMESSGAMIWKPSVTKPSMEMVVEAYSPFSMRALGVLNKFDRAMD HFDFMVWNAIRDQSDVNEEVNRFLRKFQPLAIRCYTTHLRLMTTVRNI
Sequences:
>Translated_288_residues MQNTIDKVAGADNSDVAVTTNGDTLPNDEVESSAAANTAGATTPSDVEQELNEMESAVDALQRDSLISAADADSQKGEVA RTRKMFREMSPDDRAKIVSRRRELGRQILTRQLAGASVVETMVKLNHTRLKPLFEQWWPFMNRMTINLTRFGHSTFTASE LSTITKHFETQMANLEAYVDEQLRVAEGYRAAREKDMESSGAMIWKPSVTKPSMEMVVEAYSPFSMRALGVLNKFDRAMD HFDFMVWNAIRDQSDVNEEVNRFLRKFQPLAIRCYTTHLRLMTTVRNI >Mature_288_residues MQNTIDKVAGADNSDVAVTTNGDTLPNDEVESSAAANTAGATTPSDVEQELNEMESAVDALQRDSLISAADADSQKGEVA RTRKMFREMSPDDRAKIVSRRRELGRQILTRQLAGASVVETMVKLNHTRLKPLFEQWWPFMNRMTINLTRFGHSTFTASE LSTITKHFETQMANLEAYVDEQLRVAEGYRAAREKDMESSGAMIWKPSVTKPSMEMVVEAYSPFSMRALGVLNKFDRAMD HFDFMVWNAIRDQSDVNEEVNRFLRKFQPLAIRCYTTHLRLMTTVRNI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32641; Mature: 32641
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNTIDKVAGADNSDVAVTTNGDTLPNDEVESSAAANTAGATTPSDVEQELNEMESAVDA CCCHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH LQRDSLISAADADSQKGEVARTRKMFREMSPDDRAKIVSRRRELGRQILTRQLAGASVVE HHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHH TMVKLNHTRLKPLFEQWWPFMNRMTINLTRFGHSTFTASELSTITKHFETQMANLEAYVD HHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH EQLRVAEGYRAAREKDMESSGAMIWKPSVTKPSMEMVVEAYSPFSMRALGVLNKFDRAMD HHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHH HFDFMVWNAIRDQSDVNEEVNRFLRKFQPLAIRCYTTHLRLMTTVRNI HHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHEEHHHHHHHHHHHHHCC >Mature Secondary Structure MQNTIDKVAGADNSDVAVTTNGDTLPNDEVESSAAANTAGATTPSDVEQELNEMESAVDA CCCHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH LQRDSLISAADADSQKGEVARTRKMFREMSPDDRAKIVSRRRELGRQILTRQLAGASVVE HHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHH TMVKLNHTRLKPLFEQWWPFMNRMTINLTRFGHSTFTASELSTITKHFETQMANLEAYVD HHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH EQLRVAEGYRAAREKDMESSGAMIWKPSVTKPSMEMVVEAYSPFSMRALGVLNKFDRAMD HHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHH HFDFMVWNAIRDQSDVNEEVNRFLRKFQPLAIRCYTTHLRLMTTVRNI HHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHEEHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA