| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187928594
Identifier: 187928594
GI number: 187928594
Start: 1602990
End: 1604297
Strand: Direct
Name: 187928594
Synonym: Rpic_1510
Alternate gene names: NA
Gene position: 1602990-1604297 (Clockwise)
Preceding gene: 187928593
Following gene: 187928610
Centisome position: 40.66
GC content: 55.96
Gene sequence:
>1308_bases ATGGCACGCGTACCCGAAGCAAAGAAGGGTTCCCAGATCGCCCTGTTTCAACAACAGGAGGCTCCTGAGCCGTTCAAGAA GGCGGTTCAAGCGATCCACGTTTCACCGGTAGGTAGTGCGCTGTCGCTCCAGCAGCGCCGCATCTTCAATGCACTGATCA AGAACGCCATCGAGCAACGCCTGGCAGGCCGAGAAACAAACAACACGTTTCAGGTCTCTATCCCTCAGATGATGGCAGCG CTCGACCTCACCACGAAGGACAACGCATACATCAAAGAGACCGCAAAATCGTTGATGCGCACTGTCGTGGATTGGGATCA GCTCAATAGCGACGGCACGTCGACATGGACGGGTTCAACACTCATTGCCGGCGCCAAGATTGTGGGCTCCGTCTTGTCGT ATTCGTTCGCTCCGCAGATCAGTGAGGAGCTACTGGATCCCCAACGGTACGCAATGATCGACATGCGGATCGCCAAGCTG TTCCGGCGGTCCTATTCGCTTGCGTTGTGGGAGAACACTGTACGGTTCGAACGGATAGGCCTGACCGCACGTATCCCACT GGCCACCTTTCGCAATCTCATACTCGGACGCGAAGAGAGCGAGACCAAATACAAGGAATACAAGATCTTCAAGCGAGCGG TGTTGACGCCGAGTATTGCCGAAATCAATGATGTATCAGACCATGAGATCGAGTTGATCGAGCACAAGGTCGGCCGAACC GTCGGTGAGATTCAATTCAAGATCAGTCGCAAAGTGAGCGCACTGGAGGAGGAGCCTCACCAAGACCTAGTCAACACAGT GGTCAAGTTCGGTGTCCCGCATTCCGAGGCCAAGCGCCTCGTTCGCACGTTCGGAGCCGAACGCATCCTGGAGGCAATCA GCTACACGCGCGCTCGACAAGCGAAGAAGGGTGTTCCGCCGTTGGATAACATCCCGGCGTACTTTCGCAAGTCGCTTACG GAGGATTGGGGCAAGGGCGCGGGCAAGGCTGAGTCTGCCGGAGCTGGTCAACAGCAGCAGAAGCCGTTGGCACGAAGCCC AAAGAATGAAGAGGATGCGCGGGCGCAATACCTCGCAGCTCGCATTCCGCATGCGCAGGGCTACTTTGGGGAACTATCCG CTGACGATCAGTCGGCGATGCTCTCGCGTTACAACGATCAGTGTTCTGTGAAGGAGTTGAAGGTCGTCGCAGGCAAGAAG CCCTCCAAGGCAGCGGAATCGAATTTTTTCGAATGGGTGGCACACGAAACTTGGGGCGAACCCAATGCCGGCGAAATTCT GAACTTCGTGCTGTCGGGAAAAGTCTAG
Upstream 100 bases:
>100_bases AGCGCTGTCCCTTCCTGGCAACGTAAGATTGCCAAACGAGCGCTATAGGTGAAAAATCTACCCCTAGTTTTTCACCTATA GCGAACCCACCCACTAGGTC
Downstream 100 bases:
>100_bases CTGATTATTTCGACACACCGGCTTCAAGAACGAATCGAGAGGTTGGATTCTTCTTCGCCGTGCTCATCTCAAGACGGTCG CGCGCACGGGTCATGGCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: Replication Protein; Plasmid Replication Protein; Plasmid Replication Initiation Protein
Number of amino acids: Translated: 435; Mature: 434
Protein sequence:
>435_residues MARVPEAKKGSQIALFQQQEAPEPFKKAVQAIHVSPVGSALSLQQRRIFNALIKNAIEQRLAGRETNNTFQVSIPQMMAA LDLTTKDNAYIKETAKSLMRTVVDWDQLNSDGTSTWTGSTLIAGAKIVGSVLSYSFAPQISEELLDPQRYAMIDMRIAKL FRRSYSLALWENTVRFERIGLTARIPLATFRNLILGREESETKYKEYKIFKRAVLTPSIAEINDVSDHEIELIEHKVGRT VGEIQFKISRKVSALEEEPHQDLVNTVVKFGVPHSEAKRLVRTFGAERILEAISYTRARQAKKGVPPLDNIPAYFRKSLT EDWGKGAGKAESAGAGQQQQKPLARSPKNEEDARAQYLAARIPHAQGYFGELSADDQSAMLSRYNDQCSVKELKVVAGKK PSKAAESNFFEWVAHETWGEPNAGEILNFVLSGKV
Sequences:
>Translated_435_residues MARVPEAKKGSQIALFQQQEAPEPFKKAVQAIHVSPVGSALSLQQRRIFNALIKNAIEQRLAGRETNNTFQVSIPQMMAA LDLTTKDNAYIKETAKSLMRTVVDWDQLNSDGTSTWTGSTLIAGAKIVGSVLSYSFAPQISEELLDPQRYAMIDMRIAKL FRRSYSLALWENTVRFERIGLTARIPLATFRNLILGREESETKYKEYKIFKRAVLTPSIAEINDVSDHEIELIEHKVGRT VGEIQFKISRKVSALEEEPHQDLVNTVVKFGVPHSEAKRLVRTFGAERILEAISYTRARQAKKGVPPLDNIPAYFRKSLT EDWGKGAGKAESAGAGQQQQKPLARSPKNEEDARAQYLAARIPHAQGYFGELSADDQSAMLSRYNDQCSVKELKVVAGKK PSKAAESNFFEWVAHETWGEPNAGEILNFVLSGKV >Mature_434_residues ARVPEAKKGSQIALFQQQEAPEPFKKAVQAIHVSPVGSALSLQQRRIFNALIKNAIEQRLAGRETNNTFQVSIPQMMAAL DLTTKDNAYIKETAKSLMRTVVDWDQLNSDGTSTWTGSTLIAGAKIVGSVLSYSFAPQISEELLDPQRYAMIDMRIAKLF RRSYSLALWENTVRFERIGLTARIPLATFRNLILGREESETKYKEYKIFKRAVLTPSIAEINDVSDHEIELIEHKVGRTV GEIQFKISRKVSALEEEPHQDLVNTVVKFGVPHSEAKRLVRTFGAERILEAISYTRARQAKKGVPPLDNIPAYFRKSLTE DWGKGAGKAESAGAGQQQQKPLARSPKNEEDARAQYLAARIPHAQGYFGELSADDQSAMLSRYNDQCSVKELKVVAGKKP SKAAESNFFEWVAHETWGEPNAGEILNFVLSGKV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48565; Mature: 48434
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARVPEAKKGSQIALFQQQEAPEPFKKAVQAIHVSPVGSALSLQQRRIFNALIKNAIEQR CCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH LAGRETNNTFQVSIPQMMAALDLTTKDNAYIKETAKSLMRTVVDWDQLNSDGTSTWTGST HCCCCCCCEEEEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH LIAGAKIVGSVLSYSFAPQISEELLDPQRYAMIDMRIAKLFRRSYSLALWENTVRFERIG HHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCC LTARIPLATFRNLILGREESETKYKEYKIFKRAVLTPSIAEINDVSDHEIELIEHKVGRT CEEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHCCH VGEIQFKISRKVSALEEEPHQDLVNTVVKFGVPHSEAKRLVRTFGAERILEAISYTRARQ HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AKKGVPPLDNIPAYFRKSLTEDWGKGAGKAESAGAGQQQQKPLARSPKNEEDARAQYLAA HHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHH RIPHAQGYFGELSADDQSAMLSRYNDQCSVKELKVVAGKKPSKAAESNFFEWVAHETWGE HCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC PNAGEILNFVLSGKV CCHHHHHHHHHCCCC >Mature Secondary Structure ARVPEAKKGSQIALFQQQEAPEPFKKAVQAIHVSPVGSALSLQQRRIFNALIKNAIEQR CCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH LAGRETNNTFQVSIPQMMAALDLTTKDNAYIKETAKSLMRTVVDWDQLNSDGTSTWTGST HCCCCCCCEEEEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH LIAGAKIVGSVLSYSFAPQISEELLDPQRYAMIDMRIAKLFRRSYSLALWENTVRFERIG HHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCC LTARIPLATFRNLILGREESETKYKEYKIFKRAVLTPSIAEINDVSDHEIELIEHKVGRT CEEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHCCH VGEIQFKISRKVSALEEEPHQDLVNTVVKFGVPHSEAKRLVRTFGAERILEAISYTRARQ HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AKKGVPPLDNIPAYFRKSLTEDWGKGAGKAESAGAGQQQQKPLARSPKNEEDARAQYLAA HHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHH RIPHAQGYFGELSADDQSAMLSRYNDQCSVKELKVVAGKKPSKAAESNFFEWVAHETWGE HCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC PNAGEILNFVLSGKV CCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA