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The map label for this gene is 187928515

Identifier: 187928515

GI number: 187928515

Start: 1517719

End: 1518534

Strand: Direct

Name: 187928515

Synonym: Rpic_1429

Alternate gene names: NA

Gene position: 1517719-1518534 (Clockwise)

Preceding gene: 187928514

Following gene: 187928517

Centisome position: 38.5

GC content: 67.77

Gene sequence:

>816_bases
ATGTGTTTGATTCTCACGGCCTGGCACGCCCACCCCGCCTACGCGCTGGTGGTGGCCGCCAACCGGGACGAATTCTATGA
TCGCCCTGCCGCGCCGCTGGCGTGGTGGAGCGACGCGCCCAATGTCCTGGCCGGGCGTGACATGGCCCAGGTGGTCGGTC
ACGCAGGCACGTGGATGGGCATGACGCGTGACGGCCGCTTTGCCGCGCTGACAAACTACCGCGCGCCGTCCGAGCGCCGG
CCCGATGCACGCTCGCGCGGGGAACTCGTCTCGAATTTCCTGATGGCGGACGACATGTCGGTGCCCGCCTATCTCGATAG
CCTCGCCGCACGCGACCGTGCCTACAACGGCTACAACCTGCTGACCGCCACGCGCGACGAACTCTGGTGGACGAGCAACC
GCGCCGAAGCGCCGCGCAAGCTCGCGCCCGGCCTTTACGGGCTGTCCAACGCATTGCTCGATACGCCGTGGTTCAAGGTG
CGGCATCGCATGGCTGCCTTTGCCGAAGCGCTGGCCGCAGATACGGGCCGGCACGGCAACGCGCTGGACGTGGCGCGCTA
TCTCGATCTGCTATCGGAAGCGCGCGAAGCACCGACCGGCGCTTTGCCCGCCACAGGCGTGGCCCCTGAATGGGAGAAGC
TGCTATCCGCCGCCTTCATCCGCTCGCCGCGCTACGGCACGCGTGCCAGCACCATCCTGCGCATCCGCCACGACGGGTGC
TTTGACGTGACCGAGCGCCGCTTCGACGCCCAGGGCCAGATTGGCGAAACGCGCTATCTCGGCGTGCTCGATACCGTCAC
GCACGCCGATACCTAG

Upstream 100 bases:

>100_bases
AAATCCGGCAGGCTGCTATGCTTGGCCGAAGCCCGCGCGACACAGGTCGTCACATTGACCATTGGTCGTTCGTTGCGCGG
CATGTTCAAAGGAAGTGCTC

Downstream 100 bases:

>100_bases
GCGCTGCCCACTCAGGCTGCTTCCTGCTTGGCGCTCGCGGCCTGGTCCACTTCCATTTCGGTGATGGCCGCGCCGCCCGG
GCGCAACGCCGACTGTTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MCLILTAWHAHPAYALVVAANRDEFYDRPAAPLAWWSDAPNVLAGRDMAQVVGHAGTWMGMTRDGRFAALTNYRAPSERR
PDARSRGELVSNFLMADDMSVPAYLDSLAARDRAYNGYNLLTATRDELWWTSNRAEAPRKLAPGLYGLSNALLDTPWFKV
RHRMAAFAEALAADTGRHGNALDVARYLDLLSEAREAPTGALPATGVAPEWEKLLSAAFIRSPRYGTRASTILRIRHDGC
FDVTERRFDAQGQIGETRYLGVLDTVTHADT

Sequences:

>Translated_271_residues
MCLILTAWHAHPAYALVVAANRDEFYDRPAAPLAWWSDAPNVLAGRDMAQVVGHAGTWMGMTRDGRFAALTNYRAPSERR
PDARSRGELVSNFLMADDMSVPAYLDSLAARDRAYNGYNLLTATRDELWWTSNRAEAPRKLAPGLYGLSNALLDTPWFKV
RHRMAAFAEALAADTGRHGNALDVARYLDLLSEAREAPTGALPATGVAPEWEKLLSAAFIRSPRYGTRASTILRIRHDGC
FDVTERRFDAQGQIGETRYLGVLDTVTHADT
>Mature_271_residues
MCLILTAWHAHPAYALVVAANRDEFYDRPAAPLAWWSDAPNVLAGRDMAQVVGHAGTWMGMTRDGRFAALTNYRAPSERR
PDARSRGELVSNFLMADDMSVPAYLDSLAARDRAYNGYNLLTATRDELWWTSNRAEAPRKLAPGLYGLSNALLDTPWFKV
RHRMAAFAEALAADTGRHGNALDVARYLDLLSEAREAPTGALPATGVAPEWEKLLSAAFIRSPRYGTRASTILRIRHDGC
FDVTERRFDAQGQIGETRYLGVLDTVTHADT

Specific function: Unknown

COG id: COG3332

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI190570176, Length=260, Percent_Identity=39.6153846153846, Blast_Score=154, Evalue=5e-38,
Organism=Caenorhabditis elegans, GI17566294, Length=278, Percent_Identity=24.1007194244604, Blast_Score=84, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30008; Mature: 30008

Theoretical pI: Translated: 7.21; Mature: 7.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCLILTAWHAHPAYALVVAANRDEFYDRPAAPLAWWSDAPNVLAGRDMAQVVGHAGTWMG
CEEEEEECCCCCEEEEEEECCCHHHHCCCCCCEEECCCCCCCHHCCHHHHHHCCCCCCCC
MTRDGRFAALTNYRAPSERRPDARSRGELVSNFLMADDMSVPAYLDSLAARDRAYNGYNL
CCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEE
LTATRDELWWTSNRAEAPRKLAPGLYGLSNALLDTPWFKVRHRMAAFAEALAADTGRHGN
EEECHHHHEECCCCCCCCHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCC
ALDVARYLDLLSEAREAPTGALPATGVAPEWEKLLSAAFIRSPRYGTRASTILRIRHDGC
HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCC
FDVTERRFDAQGQIGETRYLGVLDTVTHADT
CCHHHHHCCCCCCCCCEEEHHHHHHHHCCCC
>Mature Secondary Structure
MCLILTAWHAHPAYALVVAANRDEFYDRPAAPLAWWSDAPNVLAGRDMAQVVGHAGTWMG
CEEEEEECCCCCEEEEEEECCCHHHHCCCCCCEEECCCCCCCHHCCHHHHHHCCCCCCCC
MTRDGRFAALTNYRAPSERRPDARSRGELVSNFLMADDMSVPAYLDSLAARDRAYNGYNL
CCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEE
LTATRDELWWTSNRAEAPRKLAPGLYGLSNALLDTPWFKVRHRMAAFAEALAADTGRHGN
EEECHHHHEECCCCCCCCHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCC
ALDVARYLDLLSEAREAPTGALPATGVAPEWEKLLSAAFIRSPRYGTRASTILRIRHDGC
HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCC
FDVTERRFDAQGQIGETRYLGVLDTVTHADT
CCHHHHHCCCCCCCCCEEEHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA