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The map label for this gene is 187928484

Identifier: 187928484

GI number: 187928484

Start: 1490138

End: 1490632

Strand: Reverse

Name: 187928484

Synonym: Rpic_1398

Alternate gene names: NA

Gene position: 1490632-1490138 (Counterclockwise)

Preceding gene: 187928485

Following gene: 187928483

Centisome position: 37.81

GC content: 56.57

Gene sequence:

>495_bases
ATGCGTGACGTAACGGATAACGTAACTGGCGAACTGCCTGGTGTAGAGCAGAAGCGTGGTCGCGGTCGTCCGCGCAAGGC
TCACGCTTTGACCAATGCAGAGCGCCAGGCTGCGTTTCGAGCTCGGCGCAAGAAGGAGCAGGGTGGTTCCGATCGGAGCG
TTACGGTAACGAAAAAGCCCGCTGATGTTGATGCCTACGACGAGTGTAGGCTGGAGGTCGAGGAGCTTCGTGAGCGCGTT
GATGAGCTGCTCTTTGAGCTTCGCGAGGCGACGGCGCAGCACAATGAGATGGTCGAGCAACTAGCGTTAGCTCGCAGGAC
TATCCACAGCTACAAGCATGAGCTGCTGAAGGCTTACGGTAAGGTCGGTGGTGGTGATCCCGTCAAATCTGTTACTCGTA
GGCGAGTAACGAAAAAGCCGGCAGAGGAAAAGGTCGTGACCAAGGTTTGCACTCTGGAAGAGTGGCCGTTTCCAGTAGAT
CCAAAGCGCCCTTGA

Upstream 100 bases:

>100_bases
TTTCCTGAGGGCTGATTTTTCGTTACTTAGAAAAGTGTAACAGTAATTGAATATCCGTTACGAGTAACGTAAAATAGTTT
CATCAGATCGGGAGGTGAAT

Downstream 100 bases:

>100_bases
TTAGTGGCGTCTAGCGTCGGGAGTGTCCGCGCCTTTGACTAGGCGGTAGAGGTGGGGCGTGGGCAGGATCTTCGGCCGTT
GTCGCACGGCCAGTGCGGCT

Product: HMG-I and HMG-Y DNA-binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MRDVTDNVTGELPGVEQKRGRGRPRKAHALTNAERQAAFRARRKKEQGGSDRSVTVTKKPADVDAYDECRLEVEELRERV
DELLFELREATAQHNEMVEQLALARRTIHSYKHELLKAYGKVGGGDPVKSVTRRRVTKKPAEEKVVTKVCTLEEWPFPVD
PKRP

Sequences:

>Translated_164_residues
MRDVTDNVTGELPGVEQKRGRGRPRKAHALTNAERQAAFRARRKKEQGGSDRSVTVTKKPADVDAYDECRLEVEELRERV
DELLFELREATAQHNEMVEQLALARRTIHSYKHELLKAYGKVGGGDPVKSVTRRRVTKKPAEEKVVTKVCTLEEWPFPVD
PKRP
>Mature_164_residues
MRDVTDNVTGELPGVEQKRGRGRPRKAHALTNAERQAAFRARRKKEQGGSDRSVTVTKKPADVDAYDECRLEVEELRERV
DELLFELREATAQHNEMVEQLALARRTIHSYKHELLKAYGKVGGGDPVKSVTRRRVTKKPAEEKVVTKVCTLEEWPFPVD
PKRP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18728; Mature: 18728

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDVTDNVTGELPGVEQKRGRGRPRKAHALTNAERQAAFRARRKKEQGGSDRSVTVTKKP
CCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCC
ADVDAYDECRLEVEELRERVDELLFELREATAQHNEMVEQLALARRTIHSYKHELLKAYG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KVGGGDPVKSVTRRRVTKKPAEEKVVTKVCTLEEWPFPVDPKRP
CCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MRDVTDNVTGELPGVEQKRGRGRPRKAHALTNAERQAAFRARRKKEQGGSDRSVTVTKKP
CCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCC
ADVDAYDECRLEVEELRERVDELLFELREATAQHNEMVEQLALARRTIHSYKHELLKAYG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KVGGGDPVKSVTRRRVTKKPAEEKVVTKVCTLEEWPFPVDPKRP
CCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA