| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187928483
Identifier: 187928483
GI number: 187928483
Start: 1488657
End: 1489679
Strand: Reverse
Name: 187928483
Synonym: Rpic_1397
Alternate gene names: NA
Gene position: 1489679-1488657 (Counterclockwise)
Preceding gene: 187928484
Following gene: 187928482
Centisome position: 37.78
GC content: 57.58
Gene sequence:
>1023_bases ATGCGTACCACCACTATAGAACAAAACTATCAGCCTCGCCAGTTCGATTCGGGCTTCTACCGCCGCCTGCATCGCTGCGC TCCGTTGACCTCCCTCGCTGTCCCGTTTGACCAACGCAGGGCCGTTCAGCTTCGCCATGATGGCTTTGGTGAAGAGTCCA GCCGGGACGACATCATCGTGCGCGTGCGCCGTTGGCCAGATGGCCAGCGTGAGGTTGTTGGCTATCCCGTCCGTCGTCAT TATCAGAACCCGTTTGAAGGCAAGTTCGATGTGAACGTGCCGAAGGTGCGTGCTAAGCGTGGTGAGTCGGATGATCAGGA AAAGTCCATGGCATCAGCCATGCAGCGCGCTCGGCGCAAGGTTCGTGAGCTGGCAAAAACTGCTCGTCTGGATCATCTTT TGACGCTGACCTATCGCGGGTTGATGGCCGATCGTGAGCGCGCTGCGCGGGACTGGAAGGCCTTCGTGCGCCGGGTCCGG AAAGATTCAAGGCTTGTGCGTGATGGTGAGTCTTTCCACTTCGTTGCTGTCATCGAACATCACCAGAGCGGTGGCATCCA TATCCATGTAGGCGTTCGTGGCTGGCGCGACGCCATCGCGTTGCGTGATGCTTGGCATGCCGTTGTCGGCAAGGGTCAGG GCAATGTGGATATTCAAGGGCCTAAGAGCAAGGGTCGCAAACGCATTGTGGGCGTACATCGCGTCGCTGCGTACCTGAGC AAGTACATCACGAAAGGAACGCACCACAAGCTCAATGAGCGTCGCTACTGGTCGTCGAAGGGGATCGAGATTCCTGAGCG CGAGACGATCGGTCAGTTCCGATCGGAGAACGATGATGGTTCGTTCCGTGCTGGCATGGATGCAACGATGCGTTACCTCG TTGACACGGGTGCGAACTGGCAGGGCATGTGCACTTACGTGTCGCATGGCCGTAAGTGCTTCTGGTTCTCGCTGGCTGAA GACGGGTTCGATGGTGATCCGTTCGAGCCTGACGACGATGACTCATTCGCTATTGAGGTCTAG
Upstream 100 bases:
>100_bases TGCGGGCGATGTACCAACACTGAAGTTCCAAAAAGAAAGCCCCGGCGAGGTTTGCAGACCTCCCAGGGCGTGAACATCGA TAGATCTCAAGGCAACATCG
Downstream 100 bases:
>100_bases CTGCAGCTGCTGTCGCTTGTGGAGTGGGTACAGCGTGCGTCGGTACGCCTCGGCCTTGATCTCGTCAAGTTGCAGAACTG CAACGCTCCATGCAGGAATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 340; Mature: 340
Protein sequence:
>340_residues MRTTTIEQNYQPRQFDSGFYRRLHRCAPLTSLAVPFDQRRAVQLRHDGFGEESSRDDIIVRVRRWPDGQREVVGYPVRRH YQNPFEGKFDVNVPKVRAKRGESDDQEKSMASAMQRARRKVRELAKTARLDHLLTLTYRGLMADRERAARDWKAFVRRVR KDSRLVRDGESFHFVAVIEHHQSGGIHIHVGVRGWRDAIALRDAWHAVVGKGQGNVDIQGPKSKGRKRIVGVHRVAAYLS KYITKGTHHKLNERRYWSSKGIEIPERETIGQFRSENDDGSFRAGMDATMRYLVDTGANWQGMCTYVSHGRKCFWFSLAE DGFDGDPFEPDDDDSFAIEV
Sequences:
>Translated_340_residues MRTTTIEQNYQPRQFDSGFYRRLHRCAPLTSLAVPFDQRRAVQLRHDGFGEESSRDDIIVRVRRWPDGQREVVGYPVRRH YQNPFEGKFDVNVPKVRAKRGESDDQEKSMASAMQRARRKVRELAKTARLDHLLTLTYRGLMADRERAARDWKAFVRRVR KDSRLVRDGESFHFVAVIEHHQSGGIHIHVGVRGWRDAIALRDAWHAVVGKGQGNVDIQGPKSKGRKRIVGVHRVAAYLS KYITKGTHHKLNERRYWSSKGIEIPERETIGQFRSENDDGSFRAGMDATMRYLVDTGANWQGMCTYVSHGRKCFWFSLAE DGFDGDPFEPDDDDSFAIEV >Mature_340_residues MRTTTIEQNYQPRQFDSGFYRRLHRCAPLTSLAVPFDQRRAVQLRHDGFGEESSRDDIIVRVRRWPDGQREVVGYPVRRH YQNPFEGKFDVNVPKVRAKRGESDDQEKSMASAMQRARRKVRELAKTARLDHLLTLTYRGLMADRERAARDWKAFVRRVR KDSRLVRDGESFHFVAVIEHHQSGGIHIHVGVRGWRDAIALRDAWHAVVGKGQGNVDIQGPKSKGRKRIVGVHRVAAYLS KYITKGTHHKLNERRYWSSKGIEIPERETIGQFRSENDDGSFRAGMDATMRYLVDTGANWQGMCTYVSHGRKCFWFSLAE DGFDGDPFEPDDDDSFAIEV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39316; Mature: 39316
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTTTIEQNYQPRQFDSGFYRRLHRCAPLTSLAVPFDQRRAVQLRHDGFGEESSRDDIIV CCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHCCCCCCCCEEEECCCCCCCCCCCCCEEE RVRRWPDGQREVVGYPVRRHYQNPFEGKFDVNVPKVRAKRGESDDQEKSMASAMQRARRK EEECCCCCCCHHCCCCHHHHCCCCCCCEECCCCCHHHHCCCCCCHHHHHHHHHHHHHHHH VRELAKTARLDHLLTLTYRGLMADRERAARDWKAFVRRVRKDSRLVRDGESFHFVAVIEH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEE HQSGGIHIHVGVRGWRDAIALRDAWHAVVGKGQGNVDIQGPKSKGRKRIVGVHRVAAYLS CCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHH KYITKGTHHKLNERRYWSSKGIEIPERETIGQFRSENDDGSFRAGMDATMRYLVDTGANW HHHHCCCHHHCCHHHHHCCCCCCCCCHHHHHHHHCCCCCCCEECCHHHHHHHHHHCCCCC QGMCTYVSHGRKCFWFSLAEDGFDGDPFEPDDDDSFAIEV CEEEHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEC >Mature Secondary Structure MRTTTIEQNYQPRQFDSGFYRRLHRCAPLTSLAVPFDQRRAVQLRHDGFGEESSRDDIIV CCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHCCCCCCCCEEEECCCCCCCCCCCCCEEE RVRRWPDGQREVVGYPVRRHYQNPFEGKFDVNVPKVRAKRGESDDQEKSMASAMQRARRK EEECCCCCCCHHCCCCHHHHCCCCCCCEECCCCCHHHHCCCCCCHHHHHHHHHHHHHHHH VRELAKTARLDHLLTLTYRGLMADRERAARDWKAFVRRVRKDSRLVRDGESFHFVAVIEH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEE HQSGGIHIHVGVRGWRDAIALRDAWHAVVGKGQGNVDIQGPKSKGRKRIVGVHRVAAYLS CCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHH KYITKGTHHKLNERRYWSSKGIEIPERETIGQFRSENDDGSFRAGMDATMRYLVDTGANW HHHHCCCHHHCCHHHHHCCCCCCCCCHHHHHHHHCCCCCCCEECCHHHHHHHHHHCCCCC QGMCTYVSHGRKCFWFSLAEDGFDGDPFEPDDDDSFAIEV CEEEHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA