| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is cutL [H]
Identifier: 187928440
GI number: 187928440
Start: 1448666
End: 1451044
Strand: Reverse
Name: cutL [H]
Synonym: Rpic_1353
Alternate gene names: 187928440
Gene position: 1451044-1448666 (Counterclockwise)
Preceding gene: 187928441
Following gene: 187928439
Centisome position: 36.8
GC content: 65.32
Gene sequence:
>2379_bases ATGAACGCTCCCGCAGAACCCAACAACCACCTGATTGGCGCGTCCGTCAAGCGCAAGGAAGACTTCCGCTTCCTGACGGG CGCCGGGCAATACACGGACGACGTCGTGCAGGCGCACCAGTCCTACGCGGTGTTCCTGCGCTCGCCGTATGCGCATGCCC GTATCAAGCACATCAACACGGATGCCGCATGCAACCATCCGGGCGTGCTGGCCGTGCTGACGGGCGACGACCTGGCTGCC GACAAGGTCAATGGCCTGCCGTGCGGCTGGCTCATCCACAGCATTGACGGCACACCGATGAAGGAGCCGCCCCACCCCGT GCTCGCGCAAGGCAAGGTGCGCCATGTGGGCGACCAGGTTGCGCTGGTGGTGGCGGAATCGGTGAAGATCGCCAAGGACG CCGTCGAGATGATCGACGTCGAATACGACGAACTGCCCGCCGTGGTGGACACCGCCACCGCAGATACTGCCGGCACCGCT GTCCACGACGACGTACCGAACAACACCTGCTACACCTGGGGCCACGGCGACAAGGCCGCCACTGACGCGGCGTTTGCCAA GGCCGCGCACGTGACGCACCTCGATATCGTCAACAATCGGCTGATCCCGAATGCGATTGAGCCACGCGCCGTCAACGCCA GCTATTCGCGCCAGGACGACAGCTACACGCTCTACGTCGCCAACCAGAACCCGCACGTGGAACGCCTGTTGATGTCGGCG TTCGTGCTGGGCCTGACCGAAGCCAAGGTGCGCGTGATTGCGCCGGATGTGGGCGGCGGGTTCGGCTCGAAGATCTTCCT GTACCCGGAAGACGTGGCGCTCACGTGGGCATCGAAAAAAGTTGGCCGGCCGATCAAGTGGACGGCCGAGCGCTCCGAAT CCTTCCTGACCGACGCGCATGGCCGCGACCACGTCACGCATGCCGAACTGGCGCTCGATGCGCAGGGCAATTTCCTCGCC ATGCGCGTGCATACGACGGCCAACATGGGCGCGTATCTGTCGACGTTTGCCAGCAGCGTGCCGACCATCCTGTATGCGAC GTTGCTGGCCGGCCAGTACAAAACGCCGGCCATCTATGCCGAAGTGAAAGCGGTGTTCACGAACACCGCGCCCGTCGATG CGTATCGCGGTGCCGGCCGGCCGGAAGCAACGTATGTGGTGGAGCGCCTCGTGGAAACGGCCGCGCGCGAACTGCAGGTC GACCCGGCGGAACTGCGCCGCCGCAACTTCATCCGCACGTTCCCGTATGCCACGCCGGTGGGGCTGACGTACGACACGGG CGACTACGAGCCGTGCCTCGACCGCGCCATCGAACTGGCCGACGTGAAGGGTTTTGCCGCCCGACGCGACGCTTCGCGCG CCAAGGGCCGGCTGCGCGGCTTGGGCTATTCCTGCTACATCGAAGCGTGCGGACTGGCGCCGTCGAACATCGCTGGGGCA CTGGGCGCGCGGGCTGGCCTGTTTGAGGCCGGCGAAATTCGCGTCCATCCGACAGGCTCCGTCACGGTCTTCACCGGCTC GCACAGCCACGGCCAGGGCCATGAGACGACGTTCGCGCAAGTGGTGGCCGATCGTCTGGGCGTGCCCATCGACAACATCG AGATCGTGCACGGCGACACCGGGCGCATCCCGTTCGGCATGGGCACATACGGCTCGCGCTCGATTGCCGTGGGCGGCTCG GCCATCATGAAGGCACTCGACAAGATCGAGGCCAAGGCCAAGAAGATCGCCGCGCATTTGCTGGAGGCGTCGGCGGAGGA CATCGAGTTCAAGGACGGCGTCTTCCGCGTGGCCGGCACGGACCGCACCAAGACCTTTGGCGAAGTCGCGCTTACGGCGT ACGTACCGCACAACTATCCGCTCGACAAGCTCGAACCTGGGCTGGACGAAAACGCCTTCTACGATCCGACCAACTTCACC TACCCCGCCGGCGCGTACATCTGCGAAGTGGAAGTCGATCCCGACACTGGCGAGGTGCACATCGACCGCTTCGTGGCGGT GGATGACTTCGGCAACATCATCAACCCGATGATCGTCGAGGGCCAGGTGCACGGCGGGCTTGGCCAGGGCATCGGCCAGG CGCTGCTCGAGGCGTGCGTGTACGACGAAAATGGCCAGCTGCTGACGGGCTCGTACATGGACTACGCCATGCCGCGCGCC AACGACCTGCCCAGCTTCACGGTGGAAACCGCCAAGGGCACGCCGTGCACGCACAACCCGCTGGGCGTCAAAGGCTGTGG CGAGGCCGGCGCGATCGGCTCGCCGCCGGCCCTGATCAACGCCATCGTCGACGCGCTTGCGCCGTTGGGCGTGAAGGACA TCCAGATGCCAGCGACACCGCATCGGGTCTGGCAAACCATTCAAGCGGCCAAGGCCTAG
Upstream 100 bases:
>100_bases GGAGCCGAAGCCATGGCCGAAGCCCAGGGCGACGATGCCTCGCTGCAAAGCCTGGCCGCGGCGCGGGCCCACGCCGCCTG ACCCCAGCGAGGAGACCACC
Downstream 100 bases:
>100_bases GCAAGGAGCGAACCATGTACGACTTCGAGTACCAGAAAGCCACCGACGCCCAGACCGCCGTCACCGCACTGAAAACGCAC ACCGACGCCAAATACCTCGG
Product: molybdopterin-binding aldehyde oxidase and xanthine dehydrogenase
Products: NA
Alternate protein names: CO dehydrogenase subunit L; CO-DH L [H]
Number of amino acids: Translated: 792; Mature: 792
Protein sequence:
>792_residues MNAPAEPNNHLIGASVKRKEDFRFLTGAGQYTDDVVQAHQSYAVFLRSPYAHARIKHINTDAACNHPGVLAVLTGDDLAA DKVNGLPCGWLIHSIDGTPMKEPPHPVLAQGKVRHVGDQVALVVAESVKIAKDAVEMIDVEYDELPAVVDTATADTAGTA VHDDVPNNTCYTWGHGDKAATDAAFAKAAHVTHLDIVNNRLIPNAIEPRAVNASYSRQDDSYTLYVANQNPHVERLLMSA FVLGLTEAKVRVIAPDVGGGFGSKIFLYPEDVALTWASKKVGRPIKWTAERSESFLTDAHGRDHVTHAELALDAQGNFLA MRVHTTANMGAYLSTFASSVPTILYATLLAGQYKTPAIYAEVKAVFTNTAPVDAYRGAGRPEATYVVERLVETAARELQV DPAELRRRNFIRTFPYATPVGLTYDTGDYEPCLDRAIELADVKGFAARRDASRAKGRLRGLGYSCYIEACGLAPSNIAGA LGARAGLFEAGEIRVHPTGSVTVFTGSHSHGQGHETTFAQVVADRLGVPIDNIEIVHGDTGRIPFGMGTYGSRSIAVGGS AIMKALDKIEAKAKKIAAHLLEASAEDIEFKDGVFRVAGTDRTKTFGEVALTAYVPHNYPLDKLEPGLDENAFYDPTNFT YPAGAYICEVEVDPDTGEVHIDRFVAVDDFGNIINPMIVEGQVHGGLGQGIGQALLEACVYDENGQLLTGSYMDYAMPRA NDLPSFTVETAKGTPCTHNPLGVKGCGEAGAIGSPPALINAIVDALAPLGVKDIQMPATPHRVWQTIQAAKA
Sequences:
>Translated_792_residues MNAPAEPNNHLIGASVKRKEDFRFLTGAGQYTDDVVQAHQSYAVFLRSPYAHARIKHINTDAACNHPGVLAVLTGDDLAA DKVNGLPCGWLIHSIDGTPMKEPPHPVLAQGKVRHVGDQVALVVAESVKIAKDAVEMIDVEYDELPAVVDTATADTAGTA VHDDVPNNTCYTWGHGDKAATDAAFAKAAHVTHLDIVNNRLIPNAIEPRAVNASYSRQDDSYTLYVANQNPHVERLLMSA FVLGLTEAKVRVIAPDVGGGFGSKIFLYPEDVALTWASKKVGRPIKWTAERSESFLTDAHGRDHVTHAELALDAQGNFLA MRVHTTANMGAYLSTFASSVPTILYATLLAGQYKTPAIYAEVKAVFTNTAPVDAYRGAGRPEATYVVERLVETAARELQV DPAELRRRNFIRTFPYATPVGLTYDTGDYEPCLDRAIELADVKGFAARRDASRAKGRLRGLGYSCYIEACGLAPSNIAGA LGARAGLFEAGEIRVHPTGSVTVFTGSHSHGQGHETTFAQVVADRLGVPIDNIEIVHGDTGRIPFGMGTYGSRSIAVGGS AIMKALDKIEAKAKKIAAHLLEASAEDIEFKDGVFRVAGTDRTKTFGEVALTAYVPHNYPLDKLEPGLDENAFYDPTNFT YPAGAYICEVEVDPDTGEVHIDRFVAVDDFGNIINPMIVEGQVHGGLGQGIGQALLEACVYDENGQLLTGSYMDYAMPRA NDLPSFTVETAKGTPCTHNPLGVKGCGEAGAIGSPPALINAIVDALAPLGVKDIQMPATPHRVWQTIQAAKA >Mature_792_residues MNAPAEPNNHLIGASVKRKEDFRFLTGAGQYTDDVVQAHQSYAVFLRSPYAHARIKHINTDAACNHPGVLAVLTGDDLAA DKVNGLPCGWLIHSIDGTPMKEPPHPVLAQGKVRHVGDQVALVVAESVKIAKDAVEMIDVEYDELPAVVDTATADTAGTA VHDDVPNNTCYTWGHGDKAATDAAFAKAAHVTHLDIVNNRLIPNAIEPRAVNASYSRQDDSYTLYVANQNPHVERLLMSA FVLGLTEAKVRVIAPDVGGGFGSKIFLYPEDVALTWASKKVGRPIKWTAERSESFLTDAHGRDHVTHAELALDAQGNFLA MRVHTTANMGAYLSTFASSVPTILYATLLAGQYKTPAIYAEVKAVFTNTAPVDAYRGAGRPEATYVVERLVETAARELQV DPAELRRRNFIRTFPYATPVGLTYDTGDYEPCLDRAIELADVKGFAARRDASRAKGRLRGLGYSCYIEACGLAPSNIAGA LGARAGLFEAGEIRVHPTGSVTVFTGSHSHGQGHETTFAQVVADRLGVPIDNIEIVHGDTGRIPFGMGTYGSRSIAVGGS AIMKALDKIEAKAKKIAAHLLEASAEDIEFKDGVFRVAGTDRTKTFGEVALTAYVPHNYPLDKLEPGLDENAFYDPTNFT YPAGAYICEVEVDPDTGEVHIDRFVAVDDFGNIINPMIVEGQVHGGLGQGIGQALLEACVYDENGQLLTGSYMDYAMPRA NDLPSFTVETAKGTPCTHNPLGVKGCGEAGAIGSPPALINAIVDALAPLGVKDIQMPATPHRVWQTIQAAKA
Specific function: Catalyzes the oxidation of carbon monoxide to carbon dioxide [H]
COG id: COG1529
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI91823271, Length=786, Percent_Identity=24.1730279898219, Blast_Score=140, Evalue=4e-33, Organism=Homo sapiens, GI71773480, Length=760, Percent_Identity=23.6842105263158, Blast_Score=139, Evalue=1e-32, Organism=Escherichia coli, GI1789230, Length=793, Percent_Identity=28.499369482976, Blast_Score=245, Evalue=9e-66, Organism=Escherichia coli, GI1789246, Length=830, Percent_Identity=26.3855421686747, Blast_Score=213, Evalue=4e-56, Organism=Escherichia coli, GI1786478, Length=729, Percent_Identity=26.0631001371742, Blast_Score=131, Evalue=2e-31, Organism=Caenorhabditis elegans, GI17540638, Length=819, Percent_Identity=24.7863247863248, Blast_Score=161, Evalue=1e-39, Organism=Caenorhabditis elegans, GI17539860, Length=792, Percent_Identity=23.3585858585859, Blast_Score=124, Evalue=1e-28, Organism=Drosophila melanogaster, GI17737937, Length=757, Percent_Identity=25.6274768824306, Blast_Score=146, Evalue=5e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000674 - InterPro: IPR008274 - InterPro: IPR012780 [H]
Pfam domain/function: PF01315 Ald_Xan_dh_C; PF02738 Ald_Xan_dh_C2 [H]
EC number: =1.2.99.2 [H]
Molecular weight: Translated: 84800; Mature: 84800
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: PS00107 PROTEIN_KINASE_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAPAEPNNHLIGASVKRKEDFRFLTGAGQYTDDVVQAHQSYAVFLRSPYAHARIKHINT CCCCCCCCCCEECCCCCCCCCCEEEECCCCCHHHHHHHHHHEEEEEECCCCCEEEEECCC DAACNHPGVLAVLTGDDLAADKVNGLPCGWLIHSIDGTPMKEPPHPVLAQGKVRHVGDQV CCCCCCCCEEEEEECCCCCHHCCCCCCHHHEEECCCCCCCCCCCCCCCCCCCHHHCCCEE ALVVAESVKIAKDAVEMIDVEYDELPAVVDTATADTAGTAVHDDVPNNTCYTWGHGDKAA EEEEHHHHHHHHHHHHHHCCCHHHCCCCEECCCCCCCCCEEECCCCCCCEEEECCCCCHH TDAAFAKAAHVTHLDIVNNRLIPNAIEPRAVNASYSRQDDSYTLYVANQNPHVERLLMSA HHHHHHHHHHEEEEEHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHH FVLGLTEAKVRVIAPDVGGGFGSKIFLYPEDVALTWASKKVGRPIKWTAERSESFLTDAH HHHHHCCCEEEEEECCCCCCCCCEEEEEECCEEEEECHHHCCCCEEEEHHHHHHHHHCCC GRDHVTHAELALDAQGNFLAMRVHTTANMGAYLSTFASSVPTILYATLLAGQYKTPAIYA CCCCCEEEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHE EVKAVFTNTAPVDAYRGAGRPEATYVVERLVETAARELQVDPAELRRRNFIRTFPYATPV EEEEEECCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCEEECCCCCCC GLTYDTGDYEPCLDRAIELADVKGFAARRDASRAKGRLRGLGYSCYIEACGLAPSNIAGA CEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHH LGARAGLFEAGEIRVHPTGSVTVFTGSHSHGQGHETTFAQVVADRLGVPIDNIEIVHGDT HHCCCCCCCCCEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCC GRIPFGMGTYGSRSIAVGGSAIMKALDKIEAKAKKIAAHLLEASAEDIEFKDGVFRVAGT CCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCEEEEECC DRTKTFGEVALTAYVPHNYPLDKLEPGLDENAFYDPTNFTYPAGAYICEVEVDPDTGEVH CCCCCCCEEEEEEEECCCCCHHHCCCCCCCCCEECCCCCCCCCCCEEEEEEECCCCCCEE IDRFVAVDDFGNIINPMIVEGQVHGGLGQGIGQALLEACVYDENGQLLTGSYMDYAMPRA EEEEEEECHHCHHCCCEEEEEEECCCHHHHHHHHHHHHHEECCCCCEEECCHHHHCCCCC NDLPSFTVETAKGTPCTHNPLGVKGCGEAGAIGSPPALINAIVDALAPLGVKDIQMPATP CCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCH HRVWQTIQAAKA HHHHHHHHHHCC >Mature Secondary Structure MNAPAEPNNHLIGASVKRKEDFRFLTGAGQYTDDVVQAHQSYAVFLRSPYAHARIKHINT CCCCCCCCCCEECCCCCCCCCCEEEECCCCCHHHHHHHHHHEEEEEECCCCCEEEEECCC DAACNHPGVLAVLTGDDLAADKVNGLPCGWLIHSIDGTPMKEPPHPVLAQGKVRHVGDQV CCCCCCCCEEEEEECCCCCHHCCCCCCHHHEEECCCCCCCCCCCCCCCCCCCHHHCCCEE ALVVAESVKIAKDAVEMIDVEYDELPAVVDTATADTAGTAVHDDVPNNTCYTWGHGDKAA EEEEHHHHHHHHHHHHHHCCCHHHCCCCEECCCCCCCCCEEECCCCCCCEEEECCCCCHH TDAAFAKAAHVTHLDIVNNRLIPNAIEPRAVNASYSRQDDSYTLYVANQNPHVERLLMSA HHHHHHHHHHEEEEEHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHH FVLGLTEAKVRVIAPDVGGGFGSKIFLYPEDVALTWASKKVGRPIKWTAERSESFLTDAH HHHHHCCCEEEEEECCCCCCCCCEEEEEECCEEEEECHHHCCCCEEEEHHHHHHHHHCCC GRDHVTHAELALDAQGNFLAMRVHTTANMGAYLSTFASSVPTILYATLLAGQYKTPAIYA CCCCCEEEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHE EVKAVFTNTAPVDAYRGAGRPEATYVVERLVETAARELQVDPAELRRRNFIRTFPYATPV EEEEEECCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCEEECCCCCCC GLTYDTGDYEPCLDRAIELADVKGFAARRDASRAKGRLRGLGYSCYIEACGLAPSNIAGA CEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHH LGARAGLFEAGEIRVHPTGSVTVFTGSHSHGQGHETTFAQVVADRLGVPIDNIEIVHGDT HHCCCCCCCCCEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCC GRIPFGMGTYGSRSIAVGGSAIMKALDKIEAKAKKIAAHLLEASAEDIEFKDGVFRVAGT CCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCEEEEECC DRTKTFGEVALTAYVPHNYPLDKLEPGLDENAFYDPTNFTYPAGAYICEVEVDPDTGEVH CCCCCCCEEEEEEEECCCCCHHHCCCCCCCCCEECCCCCCCCCCCEEEEEEECCCCCCEE IDRFVAVDDFGNIINPMIVEGQVHGGLGQGIGQALLEACVYDENGQLLTGSYMDYAMPRA EEEEEEECHHCHHCCCEEEEEEECCCHHHHHHHHHHHHHEECCCCCEEECCHHHHCCCCC NDLPSFTVETAKGTPCTHNPLGVKGCGEAGAIGSPPALINAIVDALAPLGVKDIQMPATP CCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCH HRVWQTIQAAKA HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10482497; 2818128; 10966817; 11076018 [H]