Click here to switch to the map view.

The map label for this gene is 187928396

Identifier: 187928396

GI number: 187928396

Start: 1403250

End: 1403828

Strand: Direct

Name: 187928396

Synonym: Rpic_1307

Alternate gene names: NA

Gene position: 1403250-1403828 (Clockwise)

Preceding gene: 187928395

Following gene: 187928397

Centisome position: 35.59

GC content: 64.94

Gene sequence:

>579_bases
ATGAAAGCGCTTTTGCGACTCGTTCTGTTTCTGGATGCGGCTGTCGCACTGTGCGTCGGTCTCGTCCTGCTGGCTTCACC
GATGACGTCCATCTTCGGCGCGCTGCAATTGCCGCAGCCGGAACCGGCGATGTACGGCCAGCTGCTCGGCGTCACGCTGA
TTGGCGTGGCCTGGCTGCTGTGGCACGCCACCGTCAACGGGCAACTGACGACCGCTGTGGCCCAGGTAGTCGGTCATCTG
AACCTGGCGGTCGCCGTGCTGGTGATTGTCTGGCTGCTGTTCTTCCACCTGCCGGTGGAGGGCGCCGGCCGCATCTGGCT
GCCGACGTTTGCGGCGGTGCTGGCGGCGTTTTCCGCAGTGCAGATTCCCGCCTCGCGCCGTGTGCGCACCCATGAGCGCG
TGCGCGCGCAGAAGGCCCGTGAAGACGCCGCGGCCGCGCGCGAACGCGAACGCGCAGAAAAGGCGCAACGCAAAGAACCT
GGCTACATGCCGCCTCCGGGCTACGGCCCCGGCACTGAAGTCGACACGATTGCCGATTCCATTCCTCCACAACATGCACG
ACAAAGTCCTCATCCTTGA

Upstream 100 bases:

>100_bases
AGATAGAAGGCAAGCAGTACTGCCGCCGGGGCGCGCGGGCGCTCCGGCCGATTCAACCGGTGGCCGAGGCACGGGCGGCC
GCCCGCAACTGGAGACGATG

Downstream 100 bases:

>100_bases
TTTCGGCTCGCAGGTCACGCAACTGATTGCGCGGCGCGTGCGTGAAGCACACGTCTACTGCGAAATCCATCCGAACGACG
TGTCCGACGCCTTCGTGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MKALLRLVLFLDAAVALCVGLVLLASPMTSIFGALQLPQPEPAMYGQLLGVTLIGVAWLLWHATVNGQLTTAVAQVVGHL
NLAVAVLVIVWLLFFHLPVEGAGRIWLPTFAAVLAAFSAVQIPASRRVRTHERVRAQKAREDAAAARERERAEKAQRKEP
GYMPPPGYGPGTEVDTIADSIPPQHARQSPHP

Sequences:

>Translated_192_residues
MKALLRLVLFLDAAVALCVGLVLLASPMTSIFGALQLPQPEPAMYGQLLGVTLIGVAWLLWHATVNGQLTTAVAQVVGHL
NLAVAVLVIVWLLFFHLPVEGAGRIWLPTFAAVLAAFSAVQIPASRRVRTHERVRAQKAREDAAAARERERAEKAQRKEP
GYMPPPGYGPGTEVDTIADSIPPQHARQSPHP
>Mature_192_residues
MKALLRLVLFLDAAVALCVGLVLLASPMTSIFGALQLPQPEPAMYGQLLGVTLIGVAWLLWHATVNGQLTTAVAQVVGHL
NLAVAVLVIVWLLFFHLPVEGAGRIWLPTFAAVLAAFSAVQIPASRRVRTHERVRAQKAREDAAAARERERAEKAQRKEP
GYMPPPGYGPGTEVDTIADSIPPQHARQSPHP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20726; Mature: 20726

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKALLRLVLFLDAAVALCVGLVLLASPMTSIFGALQLPQPEPAMYGQLLGVTLIGVAWLL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
WHATVNGQLTTAVAQVVGHLNLAVAVLVIVWLLFFHLPVEGAGRIWLPTFAAVLAAFSAV
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
QIPASRRVRTHERVRAQKAREDAAAARERERAEKAQRKEPGYMPPPGYGPGTEVDTIADS
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHC
IPPQHARQSPHP
CCCHHCCCCCCC
>Mature Secondary Structure
MKALLRLVLFLDAAVALCVGLVLLASPMTSIFGALQLPQPEPAMYGQLLGVTLIGVAWLL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
WHATVNGQLTTAVAQVVGHLNLAVAVLVIVWLLFFHLPVEGAGRIWLPTFAAVLAAFSAV
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
QIPASRRVRTHERVRAQKAREDAAAARERERAEKAQRKEPGYMPPPGYGPGTEVDTIADS
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHC
IPPQHARQSPHP
CCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA