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The map label for this gene is hlpA [C]

Identifier: 187928376

GI number: 187928376

Start: 1383960

End: 1384511

Strand: Direct

Name: hlpA [C]

Synonym: Rpic_1287

Alternate gene names: 187928376

Gene position: 1383960-1384511 (Clockwise)

Preceding gene: 187928375

Following gene: 187928377

Centisome position: 35.1

GC content: 62.32

Gene sequence:

>552_bases
ATGACTGCATTCATCATGAAATCCACGCGCATCACGTTGTCCCGCATGGGCGTGTCCGCTGCTTTCGCCGCACTTGCCGC
AGCCAGCTTTGCGCTGCCGGCGACGGCGCAGGAAGCGCGCATCGCCGCCGTCAATTCGGAGCGCATCCTGCGCGACTCGC
AACCTGCCAAGGCCGCCCAGGCCAAGCTGGAAACTGAGTTCGCCAAGCGCGACCGCGAGCTGCAGGACATGGCCTCCAAG
CTCAAGGGCATGTCCGACAAGCTGGACAAGGATTCGGCCGTGCTGGCCGATTCTGATCGCAATCGCCGTCAGCGTGAGCT
GTCGGACCTGGATCGTGACTTCCAGCGCAAGCAGCGCGAGTTCCGTGAAGACCTGAACCAGCGCCGCAATGAAGAGCTGG
CCCAGGTGCTTGAGCGCGCCAACCGCGTGATCCGCTCGATTGCCGAGCAGCGCAAGTACGATCTGATCGTGCAGGAAGCC
GTGTACGTGAACCCTCGCATCGACATCACGGACGAGGTGCTCAAGGCGCTGAATTCGCAATCGGCCAAATGA

Upstream 100 bases:

>100_bases
CGCCGATCGGCCCGCTCAAGATCAGCATGGGCTTCCCGATCAAGCGGAAGACCCAAGATCAAACGCAACGCTTCCAGTTC
CAGATCGGGACTGCATTCTA

Downstream 100 bases:

>100_bases
GGTTGTCCGCATGTCGTTTTCGCTTGGTGAACTTGCTGCGTCGCTCGGCGCGACCGTCCAGGGTGACGCAGGCCTGATCG
TCAAGTCGATCGCGCCGCTG

Product: outer membrane chaperone Skp

Products: NA

Alternate protein names: Outer Membrane Protein; Outer Membrane Protein OmpH; Transmembrane Protein; Outer Membrane Protein OmpH Family; Outer Membrane Protein OmpH Family Protein; OmpH/HlpA Family Outer Membrane Protein; Outer Membrane Chaperone OmpH; Outer Membrane Proteins; Chaperone For Outer Membrane Protein; Periplasmic Molecular Chaperone For Outer Membrane Proteins

Number of amino acids: Translated: 183; Mature: 182

Protein sequence:

>183_residues
MTAFIMKSTRITLSRMGVSAAFAALAAASFALPATAQEARIAAVNSERILRDSQPAKAAQAKLETEFAKRDRELQDMASK
LKGMSDKLDKDSAVLADSDRNRRQRELSDLDRDFQRKQREFREDLNQRRNEELAQVLERANRVIRSIAEQRKYDLIVQEA
VYVNPRIDITDEVLKALNSQSAK

Sequences:

>Translated_183_residues
MTAFIMKSTRITLSRMGVSAAFAALAAASFALPATAQEARIAAVNSERILRDSQPAKAAQAKLETEFAKRDRELQDMASK
LKGMSDKLDKDSAVLADSDRNRRQRELSDLDRDFQRKQREFREDLNQRRNEELAQVLERANRVIRSIAEQRKYDLIVQEA
VYVNPRIDITDEVLKALNSQSAK
>Mature_182_residues
TAFIMKSTRITLSRMGVSAAFAALAAASFALPATAQEARIAAVNSERILRDSQPAKAAQAKLETEFAKRDRELQDMASKL
KGMSDKLDKDSAVLADSDRNRRQRELSDLDRDFQRKQREFREDLNQRRNEELAQVLERANRVIRSIAEQRKYDLIVQEAV
YVNPRIDITDEVLKALNSQSAK

Specific function: Unknown

COG id: COG2825

COG function: function code M; Outer membrane protein

Gene ontology:

Cell location: Either In The Nucleoid (Chromatin) Or In The Outer Membrane [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 580 Molecules/Cell In: Growth-Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20784; Mature: 20653

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAFIMKSTRITLSRMGVSAAFAALAAASFALPATAQEARIAAVNSERILRDSQPAKAAQ
CCCHHEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHCCCCHHHHH
AKLETEFAKRDRELQDMASKLKGMSDKLDKDSAVLADSDRNRRQRELSDLDRDFQRKQRE
HHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHH
FREDLNQRRNEELAQVLERANRVIRSIAEQRKYDLIVQEAVYVNPRIDITDEVLKALNSQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCC
SAK
CCC
>Mature Secondary Structure 
TAFIMKSTRITLSRMGVSAAFAALAAASFALPATAQEARIAAVNSERILRDSQPAKAAQ
CCHHEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHCCCCHHHHH
AKLETEFAKRDRELQDMASKLKGMSDKLDKDSAVLADSDRNRRQRELSDLDRDFQRKQRE
HHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHH
FREDLNQRRNEELAQVLERANRVIRSIAEQRKYDLIVQEAVYVNPRIDITDEVLKALNSQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCC
SAK
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA