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The map label for this gene is 187928331

Identifier: 187928331

GI number: 187928331

Start: 1329289

End: 1330083

Strand: Direct

Name: 187928331

Synonym: Rpic_1242

Alternate gene names: NA

Gene position: 1329289-1330083 (Clockwise)

Preceding gene: 187928330

Following gene: 187928333

Centisome position: 33.72

GC content: 66.29

Gene sequence:

>795_bases
ATGAATCGTCGATCCCGAATGCTCGAAGCGCTGGGCGTTTCGACCGAATGGACCTTGCGCGGGGCTGAGCCGGCCGGGTT
GGAGGCCGTCGAGGTCGCCGCCGCCGAGCCGGTTGCCGTAGAGGTGGAAGCCGATTCGTTTGTTGCGGCCGAGTCCGTGC
CCGTGCGAGGTGAACCGCCTGTCATGCACGCGTTATCGGACACGGCTGCACCACGCGCCCAGCGCATCGCCGCGTTCGAC
TGGGCGCAGCTCGAAGCTGCCGTTTCCAACTGCACATCGTGCAAGCTCTGCGAGCGTCGCACGAACACCGTTTTCGGCGT
TGGCGATCGCGAGGCGGAATGGATGCTGATCGGCGAGGCGCCGGGTGAGCAGGAAGACAAGCAGGGCGAGCCGTTTGTCG
GCCAGGCCGGCAAGCTGCTCGACAGCATGCTGCGATCGATCGGCTTGTCGCGCGAGAAGGGCGTGTTCATCGCCAACGTG
CTCAAGTGCCGCCCGCCCGGCAATCGGGACCCGGAGCCGGACGAAGCAGCGATGTGCGATCCGTATCTCAAGCGTCAGAT
TGCGCTGGTCAAGCCGCGCATCATCGTCGTGCTAGGCCGCGTTGCCGCGCAGAACCTGCTGCAGACGCAGACGCCTGTCG
GCAAGCTGCGCGGCACGGTGCATGACGTGGAAGGCGTGCCCGTGGTGGTGACCTATCACCCGGCCTACCTGCTGCGTACG
CTGACCGACAAGGCGCGTGCCTGGGAAGACCTCTGCCTGGCGCGTAAGATCTACGCGGAGCGCGGCGGCCAGTAG

Upstream 100 bases:

>100_bases
AGATCGGCCGGCGCAAGCGCTATTACCCGGCCGAGAACAACGCGCGCGAAGATGCGCTCGTCATGCGCATGGTGTGCGAG
GCGAGCGGGGTGGAGGCAGC

Downstream 100 bases:

>100_bases
CTGTCCGCCGGCGGGGCGGGCACTGTGTCAGTGGTGCTTGTCTTCGCCGATGAGCGCGGCGGTGTGGAACAGTTTCTCGT
TGATGCGATGCCGGCGCATG

Product: phage SPO1 DNA polymerase-like protein

Products: diphosphate; DNAn+1

Alternate protein names: Uracil-DNA Glycosylase; DNA Polymerase; Phage SPO1 DNA Polymerase-Like Protein; DNA Polymerase Bacteriophage-Type; Uracil DNA Glycosylase Superfamily Protein; DNA-Directed DNA Polymerase; DNA Polymerase-Related Protein Bacteriophage-Type; Uracil-DNA Glycosylase Family 4 Protein; Phage Spo1 DNA Polymerase-Related Protein; DNA Polymerase-Related Protein; DNA Glycosylase; Bacteriophage-Related DNA Polymerase; N-Terminus Of Bacteriophage-Type DNA Polymerase; Phage SPO1 DNA Polymerase Domain-Containing Protein; DNA Polymerase Domain-Containing Protein; Phage Related DNA Polymerase; Uracil-DNA Glycosylase C-Terminal; Phage SpO1 DNA Polymerase-Related Protein; Arginine Biosynthesis Bifunctional Protein ArgJ; Bacteriophage-Type DNA Polymerase; DNA Polymerase Related Protein; Uracil DNA Glycosylase; Phage DNA Polymerase-Related Protein; DNA-Directed DNA Polymerase Bacteriophage-Type; Uracil-DNA Glycosylase Phage-Related Protein; Uracil-DNA Glycosylase Superfamily Protein; Phage Shock Protein E; C-Terminal Part Of DNA Polymerase Bacteriophage-Type; Phage DNA Polymerase; Phage Spo1 DNA Polymerase Domain Protein; Uracil-DNA Glycosylase C-Terminal Domain Protein; Uracil-DNA Glycosylase-Like Protein; Uracil-DNA Glycosylase-Related Protein; Bacteriophage-Type DNA Polymerase N-Terminal Domain Protein

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MNRRSRMLEALGVSTEWTLRGAEPAGLEAVEVAAAEPVAVEVEADSFVAAESVPVRGEPPVMHALSDTAAPRAQRIAAFD
WAQLEAAVSNCTSCKLCERRTNTVFGVGDREAEWMLIGEAPGEQEDKQGEPFVGQAGKLLDSMLRSIGLSREKGVFIANV
LKCRPPGNRDPEPDEAAMCDPYLKRQIALVKPRIIVVLGRVAAQNLLQTQTPVGKLRGTVHDVEGVPVVVTYHPAYLLRT
LTDKARAWEDLCLARKIYAERGGQ

Sequences:

>Translated_264_residues
MNRRSRMLEALGVSTEWTLRGAEPAGLEAVEVAAAEPVAVEVEADSFVAAESVPVRGEPPVMHALSDTAAPRAQRIAAFD
WAQLEAAVSNCTSCKLCERRTNTVFGVGDREAEWMLIGEAPGEQEDKQGEPFVGQAGKLLDSMLRSIGLSREKGVFIANV
LKCRPPGNRDPEPDEAAMCDPYLKRQIALVKPRIIVVLGRVAAQNLLQTQTPVGKLRGTVHDVEGVPVVVTYHPAYLLRT
LTDKARAWEDLCLARKIYAERGGQ
>Mature_264_residues
MNRRSRMLEALGVSTEWTLRGAEPAGLEAVEVAAAEPVAVEVEADSFVAAESVPVRGEPPVMHALSDTAAPRAQRIAAFD
WAQLEAAVSNCTSCKLCERRTNTVFGVGDREAEWMLIGEAPGEQEDKQGEPFVGQAGKLLDSMLRSIGLSREKGVFIANV
LKCRPPGNRDPEPDEAAMCDPYLKRQIALVKPRIIVVLGRVAAQNLLQTQTPVGKLRGTVHDVEGVPVVVTYHPAYLLRT
LTDKARAWEDLCLARKIYAERGGQ

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 28723; Mature: 28723

Theoretical pI: Translated: 5.48; Mature: 5.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRRSRMLEALGVSTEWTLRGAEPAGLEAVEVAAAEPVAVEVEADSFVAAESVPVRGEPP
CCHHHHHHHHHCCCCEEEEECCCCCCCHHEEEECCCCEEEEEECCCEEEECCCCCCCCCC
VMHALSDTAAPRAQRIAAFDWAQLEAAVSNCTSCKLCERRTNTVFGVGDREAEWMLIGEA
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEECCCCCCCEEEEECC
PGEQEDKQGEPFVGQAGKLLDSMLRSIGLSREKGVFIANVLKCRPPGNRDPEPDEAAMCD
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEHEEEECCCCCCCCCCCCCCCCC
PYLKRQIALVKPRIIVVLGRVAAQNLLQTQTPVGKLRGTVHDVEGVPVVVTYHPAYLLRT
HHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCHHHHCCCEECCCCCEEEEEECHHHHHHH
LTDKARAWEDLCLARKIYAERGGQ
HHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNRRSRMLEALGVSTEWTLRGAEPAGLEAVEVAAAEPVAVEVEADSFVAAESVPVRGEPP
CCHHHHHHHHHCCCCEEEEECCCCCCCHHEEEECCCCEEEEEECCCEEEECCCCCCCCCC
VMHALSDTAAPRAQRIAAFDWAQLEAAVSNCTSCKLCERRTNTVFGVGDREAEWMLIGEA
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEECCCCCCCEEEEECC
PGEQEDKQGEPFVGQAGKLLDSMLRSIGLSREKGVFIANVLKCRPPGNRDPEPDEAAMCD
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEHEEEECCCCCCCCCCCCCCCCC
PYLKRQIALVKPRIIVVLGRVAAQNLLQTQTPVGKLRGTVHDVEGVPVVVTYHPAYLLRT
HHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCHHHHCCCEECCCCCEEEEEECHHHHHHH
LTDKARAWEDLCLARKIYAERGGQ
HHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA