| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is yeaZ [H]
Identifier: 187928329
GI number: 187928329
Start: 1328028
End: 1328768
Strand: Direct
Name: yeaZ [H]
Synonym: Rpic_1240
Alternate gene names: 187928329
Gene position: 1328028-1328768 (Clockwise)
Preceding gene: 187928327
Following gene: 187928330
Centisome position: 33.68
GC content: 67.61
Gene sequence:
>741_bases ATGCCCTGGATTCTTGCTTTCGACACCTCCACCGAGTTCTGTTCCGTCGCCCTTGGTGACGGCACGCGCACGCTGTTCCG ACATGAACACACTGGCCCGCGCTCCAGTAGCCGCGTGCTGCCCGCGGCCTCCGAATTGCTGGCCGAGGCGGGCATCGCCC TGGCCGATTGCGCGGCGATTGCCTTTGGCGCTGGCCCTGGTTCGTTTACTGGCCTGCGCACAGCGTGTGGCGTGGCGCAG GGTTTGGCCTTTGGTGCGGACTTGCCTGTCGTGCCGGTCAACTCGCTCGTCGCCTGCGCGGAACAGACGCGCGCAACATT GCCCACCGGCACAGCCGTGACCATCGCACTCGATGCGCGCATGGACGAGTGCTACTGGGCCAGCTTCGTGCCCGCCGATG CGGCGCAGGATGCCTCGGGGTGGCATGCGCTTTCCGCCATCCAGGTGAGCGGGCCGCAGAGCGTTGCCGCGCCGTCGCAG CGGTACTGGCTGGCAGGCAATGCCGCCGCGGTGTTCGGCGATCAGTTAAGCATTGCCGCAGGCGCCGAGGCTTTGTTGCC CGAAGTCGCGCCGCACGCCCGCGAGATCATCGCCGTGGGTCTGCGCCTTCTGGCAGCCGGCCATACGGTCCGACCCGAAG ACGCGGCGCCGCTCTATGTGCGTGACAAGGTTGCGCTCACCATTGAAGAGCGGCAGGCGGTGCAGCTGGCCAAGGCCGCT GCAGCAGGTGCCCAGCCATGA
Upstream 100 bases:
>100_bases AGGACGGCTTCGGTTTTCTGGTCGATTTTTCGCTCGGTTTCCCCGTCGGCGGCCACGGGTTTGCGCCTTCGGGCGCCACA CCAGCCGTTACAATGCCGCC
Downstream 100 bases:
>100_bases GCCTGATCGAGAGCACGTTGGCCCGCGTCATCACGCAAGCGCCGTTGCCTGCGGGCTGGCGGGCGGAGCGCATGACGGCA CTCGATGTGGCTGGCGTTGC
Product: peptidase M22 glycoprotease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 246; Mature: 245
Protein sequence:
>246_residues MPWILAFDTSTEFCSVALGDGTRTLFRHEHTGPRSSSRVLPAASELLAEAGIALADCAAIAFGAGPGSFTGLRTACGVAQ GLAFGADLPVVPVNSLVACAEQTRATLPTGTAVTIALDARMDECYWASFVPADAAQDASGWHALSAIQVSGPQSVAAPSQ RYWLAGNAAAVFGDQLSIAAGAEALLPEVAPHAREIIAVGLRLLAAGHTVRPEDAAPLYVRDKVALTIEERQAVQLAKAA AAGAQP
Sequences:
>Translated_246_residues MPWILAFDTSTEFCSVALGDGTRTLFRHEHTGPRSSSRVLPAASELLAEAGIALADCAAIAFGAGPGSFTGLRTACGVAQ GLAFGADLPVVPVNSLVACAEQTRATLPTGTAVTIALDARMDECYWASFVPADAAQDASGWHALSAIQVSGPQSVAAPSQ RYWLAGNAAAVFGDQLSIAAGAEALLPEVAPHAREIIAVGLRLLAAGHTVRPEDAAPLYVRDKVALTIEERQAVQLAKAA AAGAQP >Mature_245_residues PWILAFDTSTEFCSVALGDGTRTLFRHEHTGPRSSSRVLPAASELLAEAGIALADCAAIAFGAGPGSFTGLRTACGVAQG LAFGADLPVVPVNSLVACAEQTRATLPTGTAVTIALDARMDECYWASFVPADAAQDASGWHALSAIQVSGPQSVAAPSQR YWLAGNAAAVFGDQLSIAAGAEALLPEVAPHAREIIAVGLRLLAAGHTVRPEDAAPLYVRDKVALTIEERQAVQLAKAAA AGAQP
Specific function: Unknown
COG id: COG1214
COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M22 family [H]
Homologues:
Organism=Escherichia coli, GI1788109, Length=231, Percent_Identity=38.961038961039, Blast_Score=125, Evalue=2e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022496 - InterPro: IPR000905 [H]
Pfam domain/function: PF00814 Peptidase_M22 [H]
EC number: NA
Molecular weight: Translated: 25182; Mature: 25050
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPWILAFDTSTEFCSVALGDGTRTLFRHEHTGPRSSSRVLPAASELLAEAGIALADCAAI CCEEEEECCCCCEEEEEECCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHH AFGAGPGSFTGLRTACGVAQGLAFGADLPVVPVNSLVACAEQTRATLPTGTAVTIALDAR EECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECC MDECYWASFVPADAAQDASGWHALSAIQVSGPQSVAAPSQRYWLAGNAAAVFGDQLSIAA CCCHHEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEECCCCEEECCCEEECC GAEALLPEVAPHAREIIAVGLRLLAAGHTVRPEDAAPLYVRDKVALTIEERQAVQLAKAA CCHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECEEEEEEHHHHHHHHHHHH AAGAQP HCCCCC >Mature Secondary Structure PWILAFDTSTEFCSVALGDGTRTLFRHEHTGPRSSSRVLPAASELLAEAGIALADCAAI CEEEEECCCCCEEEEEECCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHH AFGAGPGSFTGLRTACGVAQGLAFGADLPVVPVNSLVACAEQTRATLPTGTAVTIALDAR EECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECC MDECYWASFVPADAAQDASGWHALSAIQVSGPQSVAAPSQRYWLAGNAAAVFGDQLSIAA CCCHHEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEECCCCEEECCCEEECC GAEALLPEVAPHAREIIAVGLRLLAAGHTVRPEDAAPLYVRDKVALTIEERQAVQLAKAA CCHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECEEEEEEHHHHHHHHHHHH AAGAQP HCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]