| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187928276
Identifier: 187928276
GI number: 187928276
Start: 1274152
End: 1274778
Strand: Direct
Name: 187928276
Synonym: Rpic_1187
Alternate gene names: NA
Gene position: 1274152-1274778 (Clockwise)
Preceding gene: 187928275
Following gene: 187928277
Centisome position: 32.32
GC content: 57.26
Gene sequence:
>627_bases ATGTTCGGTCGCTTCATGCCCACCGAAGGCAAGTTTTTTGAGTACTTCAACCAGCACGCCGAGTGCGCCGTCAAGGCGGC CCACGCGCTGAAGGAGCTGGTCAACGATTTGCCCAATGCCGAAATGCATGCACGCAACGTGCAGAATTTTGAAAAGAAGG CCGATCGCATCACGCATGACACGATCGAACTGCTGCACAAGACTTTCATCACCCCGCTTGATCGCGACGAGATCCACAAG TTGATCACGACGATGGACGACATCCTCGACCTGATGGAAGACGTGTCGCTCACCATCTCGTTGTACGACGTGACCAACGT GACGGACGAGGCGCGCCAGCTCGCGACCATCTGCGTGGCTTGCTGCGAGGAAGTCCGCAAGGCCGTGGCGCTGCTCAGCG ACATGAACAACGGCCGCCAGATCCTCACCATTGCCCACGAAATCGACCGTCTTGAGTCGGATGCCGATCGCGTGATGCGC GCTGCCATGGCCAAGCTGTTTCGCACCGAGAACGACATCAAGCTGCTGATCAAGCTCAAGGCGATCTACGAACAACTGGA GAGCATCACCGACCGTTGCGAGGATGTCGCCAACATCATCGAAGGCATCGTGCTCGAAAACGCCTGA
Upstream 100 bases:
>100_bases TGGTTCCGGTAAAATATTGCGTTTTAATGACAGCGCCGGCGGTGATCCCGTCCGGCGTTGTTTTTACGACTCCTGCTTTT TTCCGTTCCCAAGGATCATC
Downstream 100 bases:
>100_bases CGAGACGACGCCTCATGCATACGCTTCAGATCAGTCTCTGGGTGGTCGTTCTGCTGGTGGCGCTGGCCATTGTGTTCGAC TTCATGAATGGCTTTCACGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MFGRFMPTEGKFFEYFNQHAECAVKAAHALKELVNDLPNAEMHARNVQNFEKKADRITHDTIELLHKTFITPLDRDEIHK LITTMDDILDLMEDVSLTISLYDVTNVTDEARQLATICVACCEEVRKAVALLSDMNNGRQILTIAHEIDRLESDADRVMR AAMAKLFRTENDIKLLIKLKAIYEQLESITDRCEDVANIIEGIVLENA
Sequences:
>Translated_208_residues MFGRFMPTEGKFFEYFNQHAECAVKAAHALKELVNDLPNAEMHARNVQNFEKKADRITHDTIELLHKTFITPLDRDEIHK LITTMDDILDLMEDVSLTISLYDVTNVTDEARQLATICVACCEEVRKAVALLSDMNNGRQILTIAHEIDRLESDADRVMR AAMAKLFRTENDIKLLIKLKAIYEQLESITDRCEDVANIIEGIVLENA >Mature_208_residues MFGRFMPTEGKFFEYFNQHAECAVKAAHALKELVNDLPNAEMHARNVQNFEKKADRITHDTIELLHKTFITPLDRDEIHK LITTMDDILDLMEDVSLTISLYDVTNVTDEARQLATICVACCEEVRKAVALLSDMNNGRQILTIAHEIDRLESDADRVMR AAMAKLFRTENDIKLLIKLKAIYEQLESITDRCEDVANIIEGIVLENA
Specific function: Could be involved in orthophosphate transport [H]
COG id: COG1392
COG function: function code P; Phosphate transport regulator (distant homolog of PhoU)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0111 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018445 [H]
Pfam domain/function: PF01865 PhoU_div [H]
EC number: NA
Molecular weight: Translated: 23752; Mature: 23752
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGRFMPTEGKFFEYFNQHAECAVKAAHALKELVNDLPNAEMHARNVQNFEKKADRITHD CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH TIELLHKTFITPLDRDEIHKLITTMDDILDLMEDVSLTISLYDVTNVTDEARQLATICVA HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHCHHHHHHHHHHHHHH CCEEVRKAVALLSDMNNGRQILTIAHEIDRLESDADRVMRAAMAKLFRTENDIKLLIKLK HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH AIYEQLESITDRCEDVANIIEGIVLENA HHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MFGRFMPTEGKFFEYFNQHAECAVKAAHALKELVNDLPNAEMHARNVQNFEKKADRITHD CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH TIELLHKTFITPLDRDEIHKLITTMDDILDLMEDVSLTISLYDVTNVTDEARQLATICVA HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHCHHHHHHHHHHHHHH CCEEVRKAVALLSDMNNGRQILTIAHEIDRLESDADRVMRAAMAKLFRTENDIKLLIKLK HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH AIYEQLESITDRCEDVANIIEGIVLENA HHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9696772; 11481430 [H]