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The map label for this gene is kpsS [H]

Identifier: 187928240

GI number: 187928240

Start: 1230478

End: 1231686

Strand: Reverse

Name: kpsS [H]

Synonym: Rpic_1149

Alternate gene names: 187928240

Gene position: 1231686-1230478 (Counterclockwise)

Preceding gene: 187928245

Following gene: 187928239

Centisome position: 31.24

GC content: 59.88

Gene sequence:

>1209_bases
ATGCGCCGATCGTTTCTCGCCCTGCAAGGCACGGCATCGCCTTTCTTCCGCCAACTGCTGTCCGCTCTGAGCTCACGCGG
ACACCATGTGCAGCGGGTGAACTTCTGCGGGGGCGATCTCGCCTATACCGGCATCGAGAGAGGGTGCAATTACACGGGTG
AACTAAATGCCCTTTCTGGCTGGTATTCCGACCTACTCAAATCAGGTAGCTTTACCGACCTCCTACTCTTTGGGGATTGC
AGGAAAATCCATCAGCCTGTATATCCGAGTGCCGAGCGAAATAATATTCGCGTGAACGTATTCGAAGAAGGTTATGTCCG
GCCTCATTGGTTTACCATGGAAGTGCACGGCGTGAATGGTCGCTCGCGGTTGCCGCGCGACCCGGCGTGGTATCGCGAGC
ACCGCGCAGTAACGCCGCGTCACGCTCCTGGCCAAAACACTGGCTACAACCTCTACGAACGCGCTTACCACGACATCCGC
TACCGCATGGCAAATGCCTTGTACGCCAGCCGTTTTCCGCACTACCAAAGCCATCGCCCCCATAACGGCTACCGCGAATA
CGCGGGGCTGGCCCGGCGCCTGCTTCAGGAGCGCCAGTATCGGGTTGAAGCGGAACGGCTGACGGAGCGCCTGCTCGCAA
AGAAGCTGCCCTACTACTTGTTTCCGCTGCAACTGAATTCGGACTCCCAGATCCAGACCCACTCGCCGTTCGATGGCATC
CGGCAGGCGATTGACCATGTGCTTGCCTCGTTCGCCGCGCATGCGCCTGCTGATGCGCTTCTGGTCATCAAGAATCATCC
GCTTGACACAGGGCTGATCGAGTATCGCCACTACGCCAATAAAGCCGCAAAAGCGCTCGGCATGGCAGACCGCCTTGAGT
TCATCGATGCCGGCCACCTGCCGACCTTGCTCGATCACGCGCGTGGCGTGGTGGTGGTCAACAGCACGGTCGGGCTGTCT
GCCCTGCACCACCGCCGGCCGCTGAAGGCATTGGGAACGGCGATCTACGACATGGAAGGCATGACCTGGCAAGGCAACCT
GGATACGTTCTGGCGAGAAGCGGACGAACCGGACATGGCCTTGTACCAGGCGTTCCTGGACTACCTAGTGCACCACACGC
AAATCAACGGCGACTTTTACACACGCACCGGCATCGCCATGGCCACGGCCGGCGCGGTGAAGCGGCTGGAGGCTGCGGCC
CATGACTGA

Upstream 100 bases:

>100_bases
CCCTGCTCGGACTGTCACCGAAGCGAGCTTTGCCTCGCCCTGCAGATCTGACTGCCTCATCCCTCTTCCCTGATACTTAG
GCTGCTGCACGCCCCAACAG

Downstream 100 bases:

>100_bases
CCGCCGCGCCCATTGCATTGTCATCACCGGCGCCAGCGCAGGCATTGGCCAGGCACTAGCTCGCGCATACGCGGCACCCG
GCGTCACGCTCGGACTGGTT

Product: Capsule polysaccharide biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 402

Protein sequence:

>402_residues
MRRSFLALQGTASPFFRQLLSALSSRGHHVQRVNFCGGDLAYTGIERGCNYTGELNALSGWYSDLLKSGSFTDLLLFGDC
RKIHQPVYPSAERNNIRVNVFEEGYVRPHWFTMEVHGVNGRSRLPRDPAWYREHRAVTPRHAPGQNTGYNLYERAYHDIR
YRMANALYASRFPHYQSHRPHNGYREYAGLARRLLQERQYRVEAERLTERLLAKKLPYYLFPLQLNSDSQIQTHSPFDGI
RQAIDHVLASFAAHAPADALLVIKNHPLDTGLIEYRHYANKAAKALGMADRLEFIDAGHLPTLLDHARGVVVVNSTVGLS
ALHHRRPLKALGTAIYDMEGMTWQGNLDTFWREADEPDMALYQAFLDYLVHHTQINGDFYTRTGIAMATAGAVKRLEAAA
HD

Sequences:

>Translated_402_residues
MRRSFLALQGTASPFFRQLLSALSSRGHHVQRVNFCGGDLAYTGIERGCNYTGELNALSGWYSDLLKSGSFTDLLLFGDC
RKIHQPVYPSAERNNIRVNVFEEGYVRPHWFTMEVHGVNGRSRLPRDPAWYREHRAVTPRHAPGQNTGYNLYERAYHDIR
YRMANALYASRFPHYQSHRPHNGYREYAGLARRLLQERQYRVEAERLTERLLAKKLPYYLFPLQLNSDSQIQTHSPFDGI
RQAIDHVLASFAAHAPADALLVIKNHPLDTGLIEYRHYANKAAKALGMADRLEFIDAGHLPTLLDHARGVVVVNSTVGLS
ALHHRRPLKALGTAIYDMEGMTWQGNLDTFWREADEPDMALYQAFLDYLVHHTQINGDFYTRTGIAMATAGAVKRLEAAA
HD
>Mature_402_residues
MRRSFLALQGTASPFFRQLLSALSSRGHHVQRVNFCGGDLAYTGIERGCNYTGELNALSGWYSDLLKSGSFTDLLLFGDC
RKIHQPVYPSAERNNIRVNVFEEGYVRPHWFTMEVHGVNGRSRLPRDPAWYREHRAVTPRHAPGQNTGYNLYERAYHDIR
YRMANALYASRFPHYQSHRPHNGYREYAGLARRLLQERQYRVEAERLTERLLAKKLPYYLFPLQLNSDSQIQTHSPFDGI
RQAIDHVLASFAAHAPADALLVIKNHPLDTGLIEYRHYANKAAKALGMADRLEFIDAGHLPTLLDHARGVVVVNSTVGLS
ALHHRRPLKALGTAIYDMEGMTWQGNLDTFWREADEPDMALYQAFLDYLVHHTQINGDFYTRTGIAMATAGAVKRLEAAA
HD

Specific function: Unknown

COG id: COG3562

COG function: function code M; Capsule polysaccharide export protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007833 [H]

Pfam domain/function: PF05159 Capsule_synth [H]

EC number: NA

Molecular weight: Translated: 45787; Mature: 45787

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRSFLALQGTASPFFRQLLSALSSRGHHVQRVNFCGGDLAYTGIERGCNYTGELNALSG
CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCHHHH
WYSDLLKSGSFTDLLLFGDCRKIHQPVYPSAERNNIRVNVFEEGYVRPHWFTMEVHGVNG
HHHHHHCCCCCEEEEEECCHHHHCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEECCCC
RSRLPRDPAWYREHRAVTPRHAPGQNTGYNLYERAYHDIRYRMANALYASRFPHYQSHRP
CCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
HNGYREYAGLARRLLQERQYRVEAERLTERLLAKKLPYYLFPLQLNSDSQIQTHSPFDGI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEECCCCHHHH
RQAIDHVLASFAAHAPADALLVIKNHPLDTGLIEYRHYANKAAKALGMADRLEFIDAGHL
HHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PTLLDHARGVVVVNSTVGLSALHHRRPLKALGTAIYDMEGMTWQGNLDTFWREADEPDMA
HHHHHCCCCEEEEECCCCHHHHHHCCCHHHHHHHHHCCCCCEEECCHHHHHHCCCCCHHH
LYQAFLDYLVHHTQINGDFYTRTGIAMATAGAVKRLEAAAHD
HHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRRSFLALQGTASPFFRQLLSALSSRGHHVQRVNFCGGDLAYTGIERGCNYTGELNALSG
CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCHHHH
WYSDLLKSGSFTDLLLFGDCRKIHQPVYPSAERNNIRVNVFEEGYVRPHWFTMEVHGVNG
HHHHHHCCCCCEEEEEECCHHHHCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEECCCC
RSRLPRDPAWYREHRAVTPRHAPGQNTGYNLYERAYHDIRYRMANALYASRFPHYQSHRP
CCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
HNGYREYAGLARRLLQERQYRVEAERLTERLLAKKLPYYLFPLQLNSDSQIQTHSPFDGI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEECCCCHHHH
RQAIDHVLASFAAHAPADALLVIKNHPLDTGLIEYRHYANKAAKALGMADRLEFIDAGHL
HHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PTLLDHARGVVVVNSTVGLSALHHRRPLKALGTAIYDMEGMTWQGNLDTFWREADEPDMA
HHHHHCCCCEEEEECCCCHHHHHHCCCHHHHHHHHHCCCCCEEECCHHHHHHCCCCCHHH
LYQAFLDYLVHHTQINGDFYTRTGIAMATAGAVKRLEAAAHD
HHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8397187; 1735705 [H]