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The map label for this gene is 187928233

Identifier: 187928233

GI number: 187928233

Start: 1217019

End: 1217306

Strand: Direct

Name: 187928233

Synonym: Rpic_1142

Alternate gene names: NA

Gene position: 1217019-1217306 (Clockwise)

Preceding gene: 187928232

Following gene: 187928241

Centisome position: 30.87

GC content: 60.07

Gene sequence:

>288_bases
ATGCCGAATCGTGTTGATCTGTCCATGATCGAGTCCAGCCCTGCGGCGATGTTGCGGCGACGGGCTGAGGCTATCGCGTG
GGTTCGCATGCAGATCGCACGATATGGCCTGGCGTATGCCGATCTCACTGCCGCAGGGTGTTTTCCGCCGCTTCGTCGCG
CTTCATCGAAAGCACGATATCGTAGTGCTGAGGGTCAAACGTGGGATGGAGAGGGCGATATGCCGGATTGGCTGCAGCGT
GCGGTCAATGCTGGCCAGAGCCCGGAGCACTTCCGGGTTGGAACTTGA

Upstream 100 bases:

>100_bases
GCACTGTTGAAGCGCGTTCATCGCTGATGACGCGATACCGGGAAACCTTGCCACGCCGAAAGCCGAATACTCATCTTTCT
TTTCCTAGAAACTTCGCTAC

Downstream 100 bases:

>100_bases
CAGAGAGGTCCATAGGCCGTCGCGGACTGTGTTGGTCGTGATGTCCAATCAGTCCCTGCCCGCATGCTAGCCGTCTGCTG
GTAATAGCGCGTGGTGGGTC

Product: histone family protein nucleoid-structuring protein H-NS

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 95; Mature: 94

Protein sequence:

>95_residues
MPNRVDLSMIESSPAAMLRRRAEAIAWVRMQIARYGLAYADLTAAGCFPPLRRASSKARYRSAEGQTWDGEGDMPDWLQR
AVNAGQSPEHFRVGT

Sequences:

>Translated_95_residues
MPNRVDLSMIESSPAAMLRRRAEAIAWVRMQIARYGLAYADLTAAGCFPPLRRASSKARYRSAEGQTWDGEGDMPDWLQR
AVNAGQSPEHFRVGT
>Mature_94_residues
PNRVDLSMIESSPAAMLRRRAEAIAWVRMQIARYGLAYADLTAAGCFPPLRRASSKARYRSAEGQTWDGEGDMPDWLQRA
VNAGQSPEHFRVGT

Specific function: Unknown

COG id: COG2916

COG function: function code R; DNA-binding protein H-NS

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10597; Mature: 10466

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNRVDLSMIESSPAAMLRRRAEAIAWVRMQIARYGLAYADLTAAGCFPPLRRASSKARY
CCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
RSAEGQTWDGEGDMPDWLQRAVNAGQSPEHFRVGT
CCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEECCC
>Mature Secondary Structure 
PNRVDLSMIESSPAAMLRRRAEAIAWVRMQIARYGLAYADLTAAGCFPPLRRASSKARY
CCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
RSAEGQTWDGEGDMPDWLQRAVNAGQSPEHFRVGT
CCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA