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The map label for this gene is ugpA [H]

Identifier: 187928186

GI number: 187928186

Start: 1165197

End: 1166078

Strand: Direct

Name: ugpA [H]

Synonym: Rpic_1093

Alternate gene names: 187928186

Gene position: 1165197-1166078 (Clockwise)

Preceding gene: 187928185

Following gene: 187928187

Centisome position: 29.55

GC content: 59.86

Gene sequence:

>882_bases
ATGGAAAAACGCGTCGTTTTCCGATCGCGCTGGCTGCCGTATGTGCTGGTCGCCCCGCAGATCGTCGTCACTCTGGTGTT
CTTCTTCTGGCCCGCGGGGCAGGCGCTGTATCAGTCGCTGCTGCGCCAGGATGCCTTCGGCATCAACCTCGAATTCGTGG
GGCTGGAGAACTTTCACGACCTGTTTGCCGATCCGACCTATCTCGGTTCGTTCAAGACCACGGCCGTATTCGCCATTGGC
GTCGCGCTGGTCGGTCTCGGCACCTCGCTGGCGCTGGCGTACTTTGCTGATCGCGCGTTGCGTGGCGCCACGTTCTACAA
GACCCTGCTGATCTGGCCGTATGCGATTGCACCGGCTGTGGCGGGTGTGCTGTGGAGCTTCCTCTTCAACCCGTCACTGG
GCATCGTGTCGTTCATGATCCGCAAGATGGGCGTGGACTGGAACTTTGTGCTCAACGGCGGGCAGGCACTGACGCTGGTG
GTCATCATCGCGGCGTGGAAGCAGATCAGCTACAACTTCCTCTTCTTCCTGGCTGGGCTGCAGAGCATTCCGAAGTCGCT
GATCGAAGCAGCCGCCATTGACGGTGCCGGGCCGTGGAGGCGCTTCTGGTCGATCGTCTTTCCGCTGCTGTCGCCCACCA
CGTTCTTCCTGATGGTGGTGAACGTTGTGTATGCGTTCTTCGACACCTTCGCCATCATCGATTCGGTCACGCAGGGCGGC
CCGTTCAAGGCGACGGAGACGCTGGTGTTCAAGGTTTATCAAGACGGCGTGCGCGGTCTGGATATCGGCGGATCTGCGGC
TCAGTCGGTGATCCTCATGGGCTTGGTCATCGTGCTGACGATCGTCCAGTTCCGTTACGTTGAACGCAAAGTCCAATACT
GA

Upstream 100 bases:

>100_bases
TTCGAGAAGACCGTCAAGGAATAAGCGCCGATTCGGCGCTCGTCTAAACCGCCGGCCTCGTGCGCTTGCACCGGCCGGCG
GTGCGTTTTTGGAATGTCGC

Downstream 100 bases:

>100_bases
AAGGAGGGCAACCGCACCATGATTGAACGCCGTCCGCTCCTGGACTTCCTCACCCACGTCGTGCTGATTCTCGGTGTGAT
CGTCGTGGCGTTTCCGGTGT

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MEKRVVFRSRWLPYVLVAPQIVVTLVFFFWPAGQALYQSLLRQDAFGINLEFVGLENFHDLFADPTYLGSFKTTAVFAIG
VALVGLGTSLALAYFADRALRGATFYKTLLIWPYAIAPAVAGVLWSFLFNPSLGIVSFMIRKMGVDWNFVLNGGQALTLV
VIIAAWKQISYNFLFFLAGLQSIPKSLIEAAAIDGAGPWRRFWSIVFPLLSPTTFFLMVVNVVYAFFDTFAIIDSVTQGG
PFKATETLVFKVYQDGVRGLDIGGSAAQSVILMGLVIVLTIVQFRYVERKVQY

Sequences:

>Translated_293_residues
MEKRVVFRSRWLPYVLVAPQIVVTLVFFFWPAGQALYQSLLRQDAFGINLEFVGLENFHDLFADPTYLGSFKTTAVFAIG
VALVGLGTSLALAYFADRALRGATFYKTLLIWPYAIAPAVAGVLWSFLFNPSLGIVSFMIRKMGVDWNFVLNGGQALTLV
VIIAAWKQISYNFLFFLAGLQSIPKSLIEAAAIDGAGPWRRFWSIVFPLLSPTTFFLMVVNVVYAFFDTFAIIDSVTQGG
PFKATETLVFKVYQDGVRGLDIGGSAAQSVILMGLVIVLTIVQFRYVERKVQY
>Mature_293_residues
MEKRVVFRSRWLPYVLVAPQIVVTLVFFFWPAGQALYQSLLRQDAFGINLEFVGLENFHDLFADPTYLGSFKTTAVFAIG
VALVGLGTSLALAYFADRALRGATFYKTLLIWPYAIAPAVAGVLWSFLFNPSLGIVSFMIRKMGVDWNFVLNGGQALTLV
VIIAAWKQISYNFLFFLAGLQSIPKSLIEAAAIDGAGPWRRFWSIVFPLLSPTTFFLMVVNVVYAFFDTFAIIDSVTQGG
PFKATETLVFKVYQDGVRGLDIGGSAAQSVILMGLVIVLTIVQFRYVERKVQY

Specific function: Part of the ABC transporter complex ugpABCE involved in sn-glycerol-3-phosphate import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=292, Percent_Identity=60.2739726027397, Blast_Score=340, Evalue=5e-95,
Organism=Escherichia coli, GI1790465, Length=255, Percent_Identity=30.5882352941176, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1787570, Length=276, Percent_Identity=30.4347826086957, Blast_Score=94, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32582; Mature: 32582

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKRVVFRSRWLPYVLVAPQIVVTLVFFFWPAGQALYQSLLRQDAFGINLEFVGLENFHD
CCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEECCHHHH
LFADPTYLGSFKTTAVFAIGVALVGLGTSLALAYFADRALRGATFYKTLLIWPYAIAPAV
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGVLWSFLFNPSLGIVSFMIRKMGVDWNFVLNGGQALTLVVIIAAWKQISYNFLFFLAGL
HHHHHHHHHCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QSIPKSLIEAAAIDGAGPWRRFWSIVFPLLSPTTFFLMVVNVVYAFFDTFAIIDSVTQGG
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PFKATETLVFKVYQDGVRGLDIGGSAAQSVILMGLVIVLTIVQFRYVERKVQY
CCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEKRVVFRSRWLPYVLVAPQIVVTLVFFFWPAGQALYQSLLRQDAFGINLEFVGLENFHD
CCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEECCHHHH
LFADPTYLGSFKTTAVFAIGVALVGLGTSLALAYFADRALRGATFYKTLLIWPYAIAPAV
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGVLWSFLFNPSLGIVSFMIRKMGVDWNFVLNGGQALTLVVIIAAWKQISYNFLFFLAGL
HHHHHHHHHCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QSIPKSLIEAAAIDGAGPWRRFWSIVFPLLSPTTFFLMVVNVVYAFFDTFAIIDSVTQGG
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PFKATETLVFKVYQDGVRGLDIGGSAAQSVILMGLVIVLTIVQFRYVERKVQY
CCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11481431 [H]