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The map label for this gene is ybaB [C]

Identifier: 187928129

GI number: 187928129

Start: 1103224

End: 1103571

Strand: Direct

Name: ybaB [C]

Synonym: Rpic_1036

Alternate gene names: 187928129

Gene position: 1103224-1103571 (Clockwise)

Preceding gene: 187928128

Following gene: 187928130

Centisome position: 27.98

GC content: 61.49

Gene sequence:

>348_bases
ATGATGAAAGGCCAGATCGCCGGGCTGATGAAGCAGGCCCAGCAGATGCAGGAAAACATGAAAAAGGCGCAGGAGCAGCT
CGCCCTGATCGAGGTGGAAGGCGTGTCCGGCGCGGGCCTCGTGAAGGTAGTGATGACCTGCAAAAACGACGTGAAGCGTG
TGTCGATCGACCCGAGCCTGCTGGCCGAAGGCGAAGACAAGGATCTGCTGGAAGACCTGATCGCCGCCGCATTCAACGAC
GCCGTGCGCAAGGCCGAGGCCACCACGCAAGAGAAGATGGGTTCGCTCACTTCAGGCCTGGGCGGTATGGCCGGCATGCT
GCCGCCCGGCTTCAAGCTGCCCTTCTAA

Upstream 100 bases:

>100_bases
CCGCACGCGCACTGAACGGAATTTCAGGACTGAACATTGAACCCCGGCGTGCCCCGCTGAGCGGCACGCCTTGCACGACC
CATTCCAAGGAGCAATGACC

Downstream 100 bases:

>100_bases
GCAACGCCCGCCAGGATTGCGCCATGGTGCTGGAATCTGCACTGCTGCACGTCACGCCCGGCCAGGAAGCCGCCTTCGAG
ACGGCCTTCGGCGAGGCTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MMKGQIAGLMKQAQQMQENMKKAQEQLALIEVEGVSGAGLVKVVMTCKNDVKRVSIDPSLLAEGEDKDLLEDLIAAAFND
AVRKAEATTQEKMGSLTSGLGGMAGMLPPGFKLPF

Sequences:

>Translated_115_residues
MMKGQIAGLMKQAQQMQENMKKAQEQLALIEVEGVSGAGLVKVVMTCKNDVKRVSIDPSLLAEGEDKDLLEDLIAAAFND
AVRKAEATTQEKMGSLTSGLGGMAGMLPPGFKLPF
>Mature_115_residues
MMKGQIAGLMKQAQQMQENMKKAQEQLALIEVEGVSGAGLVKVVMTCKNDVKRVSIDPSLLAEGEDKDLLEDLIAAAFND
AVRKAEATTQEKMGSLTSGLGGMAGMLPPGFKLPF

Specific function: Unknown

COG id: COG0718

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0133 family

Homologues:

Organism=Escherichia coli, GI1786677, Length=113, Percent_Identity=58.4070796460177, Blast_Score=128, Evalue=1e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1036_RALPJ (B2U9S6)

Other databases:

- EMBL:   CP001068
- RefSeq:   YP_001898616.1
- ProteinModelPortal:   B2U9S6
- SMR:   B2U9S6
- GeneID:   6289209
- GenomeReviews:   CP001068_GR
- KEGG:   rpi:Rpic_1036
- HOGENOM:   HBG734215
- OMA:   MLQDLIL
- ProtClustDB:   PRK00153
- HAMAP:   MF_00274
- InterPro:   IPR004401
- Gene3D:   G3DSA:3.30.1310.10
- PIRSF:   PIRSF004555
- TIGRFAMs:   TIGR00103

Pfam domain/function: PF02575 DUF149; SSF82607 CHP00103

EC number: NA

Molecular weight: Translated: 12240; Mature: 12240

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
7.8 %Met     (Translated Protein)
8.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
7.8 %Met     (Mature Protein)
8.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKGQIAGLMKQAQQMQENMKKAQEQLALIEVEGVSGAGLVKVVMTCKNDVKRVSIDPSL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHEECCCHHH
LAEGEDKDLLEDLIAAAFNDAVRKAEATTQEKMGSLTSGLGGMAGMLPPGFKLPF
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MMKGQIAGLMKQAQQMQENMKKAQEQLALIEVEGVSGAGLVKVVMTCKNDVKRVSIDPSL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHEECCCHHH
LAEGEDKDLLEDLIAAAFNDAVRKAEATTQEKMGSLTSGLGGMAGMLPPGFKLPF
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA