Click here to switch to the map view.

The map label for this gene is 187928119

Identifier: 187928119

GI number: 187928119

Start: 1087327

End: 1087884

Strand: Reverse

Name: 187928119

Synonym: Rpic_1026

Alternate gene names: NA

Gene position: 1087884-1087327 (Counterclockwise)

Preceding gene: 187928120

Following gene: 187928118

Centisome position: 27.59

GC content: 64.87

Gene sequence:

>558_bases
ATGACGATTCGCCAAACGGTTCGTGCAATGCTGCTCGGTTGTTGCCTCGCCGCCGCCCCAGCCTTGGCGCAACCAACCAC
GCCCGTGATCCTCAGCGTCACCGCGCAATTCGATGGGCAATCCGAAACCAAACGCGTCACGCTTTCGGCCGAAACATCCA
CCACGGGCCAGCACGTCGCACTGCTCGAACGCACCCATACGTACGACGTGGGCGGCTCGATACCACGCAAGGAATGGGAG
GCGCGCTTCGCCGCCGGCCTGCCCGACGACACGATCCCGCTGGGCTGCGACACCACCACGTGCCAATTCATACGTCACCG
CTGGGCCAAGACCGGCGTCGATGTCACCCTGCGGCCGATGGTCGTATCGGGCGAGTTCCAGACGCTGTCCATCGGCGTAA
CGCTGCATCGGTTCCAGCCGTCGCCCGACGCCGAGTCCCCTGCCCGGGTCGACACCTGGGCACGCAACCTCGACACCTCG
TTGCGCGTCGGCGACACCAAGACCATGGATCTGGACGGTCACGGCATGCTTACGATCGAGCGCCTCGGCAAACCTTGA

Upstream 100 bases:

>100_bases
AGACGCTGCCATCGTTGTACGCGCTCCTGCAAGCGTTCTACCTGCAAGATCCGGCACGGCGCGTGCTGGACTCTGAACAA
CGCCAGGAGGGATTCCTGCC

Downstream 100 bases:

>100_bases
TCGAAATAAGCGTTTCGAGTCACTTTTCGATGCCCCGACACGACGGATTTTGCGGCAGGCGCGTTGCTCAAGCCCTTGTT
TCTCTGGCATAATCCTCGTT

Product: putative signal peptide protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 184

Protein sequence:

>185_residues
MTIRQTVRAMLLGCCLAAAPALAQPTTPVILSVTAQFDGQSETKRVTLSAETSTTGQHVALLERTHTYDVGGSIPRKEWE
ARFAAGLPDDTIPLGCDTTTCQFIRHRWAKTGVDVTLRPMVVSGEFQTLSIGVTLHRFQPSPDAESPARVDTWARNLDTS
LRVGDTKTMDLDGHGMLTIERLGKP

Sequences:

>Translated_185_residues
MTIRQTVRAMLLGCCLAAAPALAQPTTPVILSVTAQFDGQSETKRVTLSAETSTTGQHVALLERTHTYDVGGSIPRKEWE
ARFAAGLPDDTIPLGCDTTTCQFIRHRWAKTGVDVTLRPMVVSGEFQTLSIGVTLHRFQPSPDAESPARVDTWARNLDTS
LRVGDTKTMDLDGHGMLTIERLGKP
>Mature_184_residues
TIRQTVRAMLLGCCLAAAPALAQPTTPVILSVTAQFDGQSETKRVTLSAETSTTGQHVALLERTHTYDVGGSIPRKEWEA
RFAAGLPDDTIPLGCDTTTCQFIRHRWAKTGVDVTLRPMVVSGEFQTLSIGVTLHRFQPSPDAESPARVDTWARNLDTSL
RVGDTKTMDLDGHGMLTIERLGKP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20131; Mature: 20000

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIRQTVRAMLLGCCLAAAPALAQPTTPVILSVTAQFDGQSETKRVTLSAETSTTGQHVA
CCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEECCCCCCCEEE
LLERTHTYDVGGSIPRKEWEARFAAGLPDDTIPLGCDTTTCQFIRHRWAKTGVDVTLRPM
EEEECEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEE
VVSGEFQTLSIGVTLHRFQPSPDAESPARVDTWARNLDTSLRVGDTKTMDLDGHGMLTIE
EEECCEEEEEEEEEEEEECCCCCCCCCCHHHHHHHCCCCEEEECCCEEEEECCCCEEEEE
RLGKP
ECCCC
>Mature Secondary Structure 
TIRQTVRAMLLGCCLAAAPALAQPTTPVILSVTAQFDGQSETKRVTLSAETSTTGQHVA
CHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEECCCCCCCEEE
LLERTHTYDVGGSIPRKEWEARFAAGLPDDTIPLGCDTTTCQFIRHRWAKTGVDVTLRPM
EEEECEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEE
VVSGEFQTLSIGVTLHRFQPSPDAESPARVDTWARNLDTSLRVGDTKTMDLDGHGMLTIE
EEECCEEEEEEEEEEEEECCCCCCCCCCHHHHHHHCCCCEEEECCCEEEEECCCCEEEEE
RLGKP
ECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA