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The map label for this gene is rpmE2

Identifier: 187928118

GI number: 187928118

Start: 1086863

End: 1087123

Strand: Reverse

Name: rpmE2

Synonym: Rpic_1025

Alternate gene names: 187928118

Gene position: 1087123-1086863 (Counterclockwise)

Preceding gene: 187928119

Following gene: 187928117

Centisome position: 27.57

GC content: 55.17

Gene sequence:

>261_bases
ATGAAAGAAGGCATTCACCCGAATTACCGCGAAGTCGTGTTCCAGGACATGTCCAGCGACTTCAAGTTCATCACCCGCTC
GACCATCCAGACCAAGGAAATGATCACGCTGGACGGCAAGGAATATCCGCTGGCCAAGATTGAAGTCTCGTCCGAATCGC
ACCCGTTCTACACGGGCCAGCAAAAGGTTCTGGACACGGCCGGCCGCGTCGAGAAGTTCCGCAACAAGTTCGGCAGCAAG
ATCGGCAAGGCTGCCAAGTAA

Upstream 100 bases:

>100_bases
CCACCCGGCAAGTGATTCGAGGGCTGGTCGCACGGTGGCTCCTACCATGTGAGCACCTGAAGCGCGCCGCGAATTGGCTA
CCTCTACCCCAGGGCCCATC

Downstream 100 bases:

>100_bases
TATCGGCGCCGGAGACGGCTCAGCGCATGACTCGCTCAGTGCAGACCGTCTTAGTGGTCAGAAAAAGGCAGCTCCGGCTG
CCTTTTTTGTTTCTCGGCAC

Product: 50S ribosomal protein L31 type B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 86; Mature: 86

Protein sequence:

>86_residues
MKEGIHPNYREVVFQDMSSDFKFITRSTIQTKEMITLDGKEYPLAKIEVSSESHPFYTGQQKVLDTAGRVEKFRNKFGSK
IGKAAK

Sequences:

>Translated_86_residues
MKEGIHPNYREVVFQDMSSDFKFITRSTIQTKEMITLDGKEYPLAKIEVSSESHPFYTGQQKVLDTAGRVEKFRNKFGSK
IGKAAK
>Mature_86_residues
MKEGIHPNYREVVFQDMSSDFKFITRSTIQTKEMITLDGKEYPLAKIEVSSESHPFYTGQQKVLDTAGRVEKFRNKFGSK
IGKAAK

Specific function: Unknown

COG id: COG0254

COG function: function code J; Ribosomal protein L31

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L31P family. Type B subfamily

Homologues:

Organism=Escherichia coli, GI2367109, Length=78, Percent_Identity=51.2820512820513, Blast_Score=82, Evalue=7e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL31B_RALPJ (B2U9R5)

Other databases:

- EMBL:   CP001068
- RefSeq:   YP_001898605.1
- ProteinModelPortal:   B2U9R5
- SMR:   B2U9R5
- GeneID:   6286511
- GenomeReviews:   CP001068_GR
- KEGG:   rpi:Rpic_1025
- HOGENOM:   HBG610087
- OMA:   QFLTRST
- ProtClustDB:   PRK01678
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00502
- InterPro:   IPR002150
- PRINTS:   PR01249
- TIGRFAMs:   TIGR00105

Pfam domain/function: PF01197 Ribosomal_L31

EC number: NA

Molecular weight: Translated: 9846; Mature: 9846

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: PS01143 RIBOSOMAL_L31

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEGIHPNYREVVFQDMSSDFKFITRSTIQTKEMITLDGKEYPLAKIEVSSESHPFYTGQ
CCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCEEEECCCCCCEEEEEECCCCCCCCCCH
QKVLDTAGRVEKFRNKFGSKIGKAAK
HHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKEGIHPNYREVVFQDMSSDFKFITRSTIQTKEMITLDGKEYPLAKIEVSSESHPFYTGQ
CCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCEEEECCCCCCEEEEEECCCCCCCCCCH
QKVLDTAGRVEKFRNKFGSKIGKAAK
HHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA