| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
Click here to switch to the map view.
The map label for this gene is 187928052
Identifier: 187928052
GI number: 187928052
Start: 1015204
End: 1016283
Strand: Reverse
Name: 187928052
Synonym: Rpic_0959
Alternate gene names: NA
Gene position: 1016283-1015204 (Counterclockwise)
Preceding gene: 187928067
Following gene: 187928051
Centisome position: 25.78
GC content: 69.17
Gene sequence:
>1080_bases ATGATTCCTGAACTCACCCTGATTGTCCCGTTTTGCGCGGCCGCTGCCGAGGTGGCGGATGACGCTTACCGTCAATTGAC CTTGCCGGGCCTGGAAAGGTTGCTCGCGCGTGCGCGCGAAACGGAACGCGAGCGCCACGACGACGCCTACCTGCCCACGC TGCCGCACGAGCGCTGGCTGGCCAAGCATGCCGGGCTACCGATCTCTCCACTGCCGTCGGCGCCATACATGCGCCTGGCG GACGGCGGCACCGCCGACACGCGCACCTGGGCCTGCCTGCAGCCGGTCCACATCCACGCCGCCCGAGACCATCTGGTGAT GCTCGACCCGGCCCAGCTGCGCCTGGAAGCCGCCGACGCCGACGCGCTGCGCGCCGCCATCGCCCCCCTGGTTTCTGAGA TGGGCATCACGCTCGATGCCACGCACGCCGCGCGCTGGTACGTCGCCGATTCGCCCTTTGGCGACCTCATTGCCGCCGCG CCGCAGCGCGCCACCGGCCACAACATCGACATCTGGATGCACAAGGGCGAGCAGGAGCGCGCTTGGCGCAAGTTCCAGAA CGAGATCCAGATGACGTGGTACGACCACCCCGTCAATCAGACGCGCGAGGCGCGCGGCCTGCTGCCGGTCAACTCGGTCT GGCTATTCGGCCAGGGCGCGCTGGTCGATGCCCGCCCCATTGCCGAGCGCATGATCGGCGCTGATCCGTTCTTCGCCGGC CTGTGTCACGCCGGCAACGCCACCGAACTCTGCGCTGAAACGCTGGCCGCCGTGCCGTTCGACGACACGAGCGCCGCCGC GCTGCTGGGCGACGCCGGCAAGCCGTATCTCTCCGCCGACTGGTACGACTGGATCGAAACCCTGCGCGCCTACGATCGCG ACTGGTTTGCCCCCGCCGCCGATGCGCTGGCCGACGGCCGCATCGATGCCGTCTCGCTCGTGCTGACCGGCGACTCGCAC TACGCACATTACCGCGTCACCCGCCGCGAACTCGCCAATGGCCCGTTCGGCTGGCTGCGCCGCTTCAGTCGCCCGCGCAG CTTGCGCGACGCGCTGTCCCCGCTTTCCATGGCCGCTTGA
Upstream 100 bases:
>100_bases CCGATCTGCCATTCGTATGGAAGTTTCAAAGGGGGTTCCCCGTGGGTGTGATTTGTCCAGCTCACTGGCCGACAAGCCGG AAGTTTACAATCTCGGAGCC
Downstream 100 bases:
>100_bases GCCTGATCCTGCATGACCCGCATCGCTGTCCGCTCACATTCCGCTGACGCCGCCACCACGCTGGCCGGCCACGGCATCCA TCCTGTCCTGGCGCGCATCC
Product: hypothetical protein
Products: NA
Alternate protein names: 2 3-Bisphosphoglycerate-Independent Phosphoglycerate Mutase; Regulatory Protein
Number of amino acids: Translated: 359; Mature: 359
Protein sequence:
>359_residues MIPELTLIVPFCAAAAEVADDAYRQLTLPGLERLLARARETERERHDDAYLPTLPHERWLAKHAGLPISPLPSAPYMRLA DGGTADTRTWACLQPVHIHAARDHLVMLDPAQLRLEAADADALRAAIAPLVSEMGITLDATHAARWYVADSPFGDLIAAA PQRATGHNIDIWMHKGEQERAWRKFQNEIQMTWYDHPVNQTREARGLLPVNSVWLFGQGALVDARPIAERMIGADPFFAG LCHAGNATELCAETLAAVPFDDTSAAALLGDAGKPYLSADWYDWIETLRAYDRDWFAPAADALADGRIDAVSLVLTGDSH YAHYRVTRRELANGPFGWLRRFSRPRSLRDALSPLSMAA
Sequences:
>Translated_359_residues MIPELTLIVPFCAAAAEVADDAYRQLTLPGLERLLARARETERERHDDAYLPTLPHERWLAKHAGLPISPLPSAPYMRLA DGGTADTRTWACLQPVHIHAARDHLVMLDPAQLRLEAADADALRAAIAPLVSEMGITLDATHAARWYVADSPFGDLIAAA PQRATGHNIDIWMHKGEQERAWRKFQNEIQMTWYDHPVNQTREARGLLPVNSVWLFGQGALVDARPIAERMIGADPFFAG LCHAGNATELCAETLAAVPFDDTSAAALLGDAGKPYLSADWYDWIETLRAYDRDWFAPAADALADGRIDAVSLVLTGDSH YAHYRVTRRELANGPFGWLRRFSRPRSLRDALSPLSMAA >Mature_359_residues MIPELTLIVPFCAAAAEVADDAYRQLTLPGLERLLARARETERERHDDAYLPTLPHERWLAKHAGLPISPLPSAPYMRLA DGGTADTRTWACLQPVHIHAARDHLVMLDPAQLRLEAADADALRAAIAPLVSEMGITLDATHAARWYVADSPFGDLIAAA PQRATGHNIDIWMHKGEQERAWRKFQNEIQMTWYDHPVNQTREARGLLPVNSVWLFGQGALVDARPIAERMIGADPFFAG LCHAGNATELCAETLAAVPFDDTSAAALLGDAGKPYLSADWYDWIETLRAYDRDWFAPAADALADGRIDAVSLVLTGDSH YAHYRVTRRELANGPFGWLRRFSRPRSLRDALSPLSMAA
Specific function: Unknown
COG id: COG4255
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39711; Mature: 39711
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPELTLIVPFCAAAAEVADDAYRQLTLPGLERLLARARETERERHDDAYLPTLPHERWL CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH AKHAGLPISPLPSAPYMRLADGGTADTRTWACLQPVHIHAARDHLVMLDPAQLRLEAADA HHHCCCCCCCCCCCCCEEECCCCCCCCCEEEECCCEEEEECCCCEEEECHHHHEEECCCH DALRAAIAPLVSEMGITLDATHAARWYVADSPFGDLIAAAPQRATGHNIDIWMHKGEQER HHHHHHHHHHHHHCCCEEEECCCEEEEECCCCHHHHHHCCCCCCCCCCEEEEEECCCHHH AWRKFQNEIQMTWYDHPVNQTREARGLLPVNSVWLFGQGALVDARPIAERMIGADPFFAG HHHHHHHHEEEEEECCCCCHHHHHCCCCCCCCEEEECCCCEECCHHHHHHHCCCCHHHHH LCHAGNATELCAETLAAVPFDDTSAAALLGDAGKPYLSADWYDWIETLRAYDRDWFAPAA HHCCCCHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHH DALADGRIDAVSLVLTGDSHYAHYRVTRRELANGPFGWLRRFSRPRSLRDALSPLSMAA HHHHCCCEEEEEEEEECCCCEEEHEEHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHCC >Mature Secondary Structure MIPELTLIVPFCAAAAEVADDAYRQLTLPGLERLLARARETERERHDDAYLPTLPHERWL CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH AKHAGLPISPLPSAPYMRLADGGTADTRTWACLQPVHIHAARDHLVMLDPAQLRLEAADA HHHCCCCCCCCCCCCCEEECCCCCCCCCEEEECCCEEEEECCCCEEEECHHHHEEECCCH DALRAAIAPLVSEMGITLDATHAARWYVADSPFGDLIAAAPQRATGHNIDIWMHKGEQER HHHHHHHHHHHHHCCCEEEECCCEEEEECCCCHHHHHHCCCCCCCCCCEEEEEECCCHHH AWRKFQNEIQMTWYDHPVNQTREARGLLPVNSVWLFGQGALVDARPIAERMIGADPFFAG HHHHHHHHEEEEEECCCCCHHHHHCCCCCCCCEEEECCCCEECCHHHHHHHCCCCHHHHH LCHAGNATELCAETLAAVPFDDTSAAALLGDAGKPYLSADWYDWIETLRAYDRDWFAPAA HHCCCCHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHH DALADGRIDAVSLVLTGDSHYAHYRVTRRELANGPFGWLRRFSRPRSLRDALSPLSMAA HHHHCCCEEEEEEEEECCCCEEEHEEHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA