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The map label for this gene is rmuC [H]

Identifier: 187927995

GI number: 187927995

Start: 953400

End: 954872

Strand: Direct

Name: rmuC [H]

Synonym: Rpic_0900

Alternate gene names: 187927995

Gene position: 953400-954872 (Clockwise)

Preceding gene: 187927994

Following gene: 187928001

Centisome position: 24.18

GC content: 63.95

Gene sequence:

>1473_bases
ATGGACTGGTTGGCTTTATTGACGTTGCTGGGCGTGGCCGTGGTGGCCGTGCTGTGTGTGCTGATCTGGCGTGGTGTGTC
TCGCCCGGCGCAGAGCGATGTGTCGCCGATGTTCTCGGCACTGCGCGATGAACTGACACGCGGCAACGAGCGCATCGAGC
GCGAACTGCGCGGCGAAATCGCTGAGACGGCACGCATCGGCCGCAGCGACGTCACGCAGCAACTGGGGCAATTCCAGCAG
GTGCTGGCCACGCAGCTCACCAGCGTCGCCACGCTGCAGAACAACCAGATCGACACGTTTGCGCAGCAGCTCACCAAGCT
GACTGAAACAAACACGCAGCAGTTGGAAGCGGTGCGTCAGAACTTGCAGCAGCAAGCCCAACAGGCACGTGAAGAGCAGG
GCAATGCGCTGCGCCGCTTTGGCGAGACGATGCAGCAGCAGCTCGCCCAGTTGGGTGAGGGCAACGAACGTCGTCTGGCC
GAGGTGCGTGCCACGCTGGAGCAGAAGCTCAAGGACATCGAGGCGAACAACGCGACCAAGCTCGATGAGATGCGCCGCAC
CGTCGACGAGAAGCTCCACGCCACACTGGAACAGCGCCTGGGCGAATCGTTCAAGCTGGTGTCGGATCGGCTTGAGCAGG
TGCATCGCGGCCTGGGCGAAATGCAGGCGCTGGCCCAGGGCGTGGGGGACCTGAAGAAGGTGCTGACCAACGTGAAGACG
CGCGGCACCTGGGGCGAAGTCCAGCTGGAGATGCTGCTGGAGCAGATGCTCACGCCCGAGCAGTACGGCAAGAACGTCGA
GACCGTGCACGGTACCGGTGCACGCGTGGAATTCGCCATTCGCCTGCCTGGCAAGACCGATGCCGATCACGATGCCACCG
TCTGGCTGCCGATCGACGCCAAGTTCCCGAAAGAGCAGTACGAACGCCTGCTGGACGCACAGGAACGTGCCGATGCCGAA
GCCGCTGCCAGCGCCAGCCGCGAGCTGGAAGTCGCGGTGCGCAAGGAGGCGCAGACCATCCACGAGAAGTACATCGCGCC
GCCGGCCACGACCGACTTCGCCATCCTGTTTCTGCCGACGGAAGGTCTTTACGCTGAAGTGCTGCGCCGCCCGGGCCTGA
CTGACGAGCTGCAACGCAAGTTCCGCGTGACGGTGGCGGGCCCGACCACGCTCACCGCGATCCTCAACAGCCTGCAGATG
GGCTTCCGAACGCTGGCGCTCGAAAAACGCTCCAGCGAAGTGTGGCAAGTGCTCGGCGCGGTGAAGAGCGAGTTCGGAAA
GTTCGGCGACGTGCTGGCCGCGACAAAGAAAACGCTGGAGCGCGCCGTCAGCAACATCGAGCAGGCCGAGGTGCGTACGC
GGCAGATGAATCGTAAGCTCAAGGCAGTGGAGGCGTTGCCGAGCGATTCTGCGCAGAGCGTGCTGGGGCTGGAGTCCGCC
GTGCCGCCGGACGAGGAAATCGAGGTCGATTAA

Upstream 100 bases:

>100_bases
GATCGCTGCGCTGGGCTTTGGCCCCCGCGCGGGGCAGCCGCCCAACTTGTTGAACCCGGATGCGCTGGCGCAGCGCGCGT
CCTCCTGATCGAACGCAAAT

Downstream 100 bases:

>100_bases
GGCTGGTCCGACTAGGCCGTCAGCAAAAGAAAAGGGGCGGATATTCCGCCCCTTCTTCGTGGACCTCGGAAGCGATCAGG
CTTCTTCCGGCACGTCGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 490; Mature: 490

Protein sequence:

>490_residues
MDWLALLTLLGVAVVAVLCVLIWRGVSRPAQSDVSPMFSALRDELTRGNERIERELRGEIAETARIGRSDVTQQLGQFQQ
VLATQLTSVATLQNNQIDTFAQQLTKLTETNTQQLEAVRQNLQQQAQQAREEQGNALRRFGETMQQQLAQLGEGNERRLA
EVRATLEQKLKDIEANNATKLDEMRRTVDEKLHATLEQRLGESFKLVSDRLEQVHRGLGEMQALAQGVGDLKKVLTNVKT
RGTWGEVQLEMLLEQMLTPEQYGKNVETVHGTGARVEFAIRLPGKTDADHDATVWLPIDAKFPKEQYERLLDAQERADAE
AAASASRELEVAVRKEAQTIHEKYIAPPATTDFAILFLPTEGLYAEVLRRPGLTDELQRKFRVTVAGPTTLTAILNSLQM
GFRTLALEKRSSEVWQVLGAVKSEFGKFGDVLAATKKTLERAVSNIEQAEVRTRQMNRKLKAVEALPSDSAQSVLGLESA
VPPDEEIEVD

Sequences:

>Translated_490_residues
MDWLALLTLLGVAVVAVLCVLIWRGVSRPAQSDVSPMFSALRDELTRGNERIERELRGEIAETARIGRSDVTQQLGQFQQ
VLATQLTSVATLQNNQIDTFAQQLTKLTETNTQQLEAVRQNLQQQAQQAREEQGNALRRFGETMQQQLAQLGEGNERRLA
EVRATLEQKLKDIEANNATKLDEMRRTVDEKLHATLEQRLGESFKLVSDRLEQVHRGLGEMQALAQGVGDLKKVLTNVKT
RGTWGEVQLEMLLEQMLTPEQYGKNVETVHGTGARVEFAIRLPGKTDADHDATVWLPIDAKFPKEQYERLLDAQERADAE
AAASASRELEVAVRKEAQTIHEKYIAPPATTDFAILFLPTEGLYAEVLRRPGLTDELQRKFRVTVAGPTTLTAILNSLQM
GFRTLALEKRSSEVWQVLGAVKSEFGKFGDVLAATKKTLERAVSNIEQAEVRTRQMNRKLKAVEALPSDSAQSVLGLESA
VPPDEEIEVD
>Mature_490_residues
MDWLALLTLLGVAVVAVLCVLIWRGVSRPAQSDVSPMFSALRDELTRGNERIERELRGEIAETARIGRSDVTQQLGQFQQ
VLATQLTSVATLQNNQIDTFAQQLTKLTETNTQQLEAVRQNLQQQAQQAREEQGNALRRFGETMQQQLAQLGEGNERRLA
EVRATLEQKLKDIEANNATKLDEMRRTVDEKLHATLEQRLGESFKLVSDRLEQVHRGLGEMQALAQGVGDLKKVLTNVKT
RGTWGEVQLEMLLEQMLTPEQYGKNVETVHGTGARVEFAIRLPGKTDADHDATVWLPIDAKFPKEQYERLLDAQERADAE
AAASASRELEVAVRKEAQTIHEKYIAPPATTDFAILFLPTEGLYAEVLRRPGLTDELQRKFRVTVAGPTTLTAILNSLQM
GFRTLALEKRSSEVWQVLGAVKSEFGKFGDVLAATKKTLERAVSNIEQAEVRTRQMNRKLKAVEALPSDSAQSVLGLESA
VPPDEEIEVD

Specific function: Involved in DNA recombination [H]

COG id: COG1322

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rmuC family [H]

Homologues:

Organism=Escherichia coli, GI1790266, Length=375, Percent_Identity=24.8, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003798 [H]

Pfam domain/function: PF02646 RmuC [H]

EC number: NA

Molecular weight: Translated: 54668; Mature: 54668

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDWLALLTLLGVAVVAVLCVLIWRGVSRPAQSDVSPMFSALRDELTRGNERIERELRGEI
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHH
AETARIGRSDVTQQLGQFQQVLATQLTSVATLQNNQIDTFAQQLTKLTETNTQQLEAVRQ
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHH
NLQQQAQQAREEQGNALRRFGETMQQQLAQLGEGNERRLAEVRATLEQKLKDIEANNATK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHH
LDEMRRTVDEKLHATLEQRLGESFKLVSDRLEQVHRGLGEMQALAQGVGDLKKVLTNVKT
HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RGTWGEVQLEMLLEQMLTPEQYGKNVETVHGTGARVEFAIRLPGKTDADHDATVWLPIDA
CCCHHHHHHHHHHHHHCCHHHHCCCCCEECCCCCEEEEEEECCCCCCCCCCCEEEEECCC
KFPKEQYERLLDAQERADAEAAASASRELEVAVRKEAQTIHEKYIAPPATTDFAILFLPT
CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECC
EGLYAEVLRRPGLTDELQRKFRVTVAGPTTLTAILNSLQMGFRTLALEKRSSEVWQVLGA
CHHHHHHHHCCCCCHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKSEFGKFGDVLAATKKTLERAVSNIEQAEVRTRQMNRKLKAVEALPSDSAQSVLGLESA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHC
VPPDEEIEVD
CCCCCCCCCC
>Mature Secondary Structure
MDWLALLTLLGVAVVAVLCVLIWRGVSRPAQSDVSPMFSALRDELTRGNERIERELRGEI
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHH
AETARIGRSDVTQQLGQFQQVLATQLTSVATLQNNQIDTFAQQLTKLTETNTQQLEAVRQ
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHH
NLQQQAQQAREEQGNALRRFGETMQQQLAQLGEGNERRLAEVRATLEQKLKDIEANNATK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHH
LDEMRRTVDEKLHATLEQRLGESFKLVSDRLEQVHRGLGEMQALAQGVGDLKKVLTNVKT
HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RGTWGEVQLEMLLEQMLTPEQYGKNVETVHGTGARVEFAIRLPGKTDADHDATVWLPIDA
CCCHHHHHHHHHHHHHCCHHHHCCCCCEECCCCCEEEEEEECCCCCCCCCCCEEEEECCC
KFPKEQYERLLDAQERADAEAAASASRELEVAVRKEAQTIHEKYIAPPATTDFAILFLPT
CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECC
EGLYAEVLRRPGLTDELQRKFRVTVAGPTTLTAILNSLQMGFRTLALEKRSSEVWQVLGA
CHHHHHHHHCCCCCHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKSEFGKFGDVLAATKKTLERAVSNIEQAEVRTRQMNRKLKAVEALPSDSAQSVLGLESA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHC
VPPDEEIEVD
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]