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The map label for this gene is ydeK [H]

Identifier: 187927943

GI number: 187927943

Start: 900301

End: 901239

Strand: Reverse

Name: ydeK [H]

Synonym: Rpic_0848

Alternate gene names: 187927943

Gene position: 901239-900301 (Counterclockwise)

Preceding gene: 187927944

Following gene: 187927942

Centisome position: 22.86

GC content: 68.48

Gene sequence:

>939_bases
ATGAACAAGTCCGCCGCCCTCCCCATGCAACACGCCGACCACGCCGAACGCCGGGGCTTGCTGCTCGGCCTCATCGGCGT
GGCCATCTTTAGCCAGACGCTGCCGTTCACGCGCATGGCCGTGGCCGAGCTGGATGCGACCTTCGTGGCGCTGGCGCGCG
CGGTGCTGGCGAGTGTGCTGGCGCTGGCGATGCTGGCGGCCACGGGCGCGTTCTCCGCCGCCAAACGCCCGCGCGGCCAT
CAATGGTGGCAGCTGGCGGTGACGGCAATGGGCGTGGTGGTCGGCTTTCCGCTGTTCTCCTCGCTGGCGATGCGAGACGT
ACCGGCCGCCCATGGCGCCATCATCACCGGCCTGCTGCCGCTTGCGACCGCCATCTTCGCCGCCTGGTTCGGGCGCGAGC
GGCCGTCTGCCGGGTTCTGGCTGTGTGCGCTGGCGGGCAGTGTGCTTGTCGTCTCCTTTGCGCTGCTGCAAGGCGCGGGG
AGCCTGCATCGCGCCGATTGGCTCCTCTTCGCCGCCATGGTGACCGGCGCGCTCGGCTATGCAACCGGCGGCAAGCTCGC
GCGAGAACTGGGCGGCACGCAGACGATTGCCTGGGCGCTGATCGTCTCCCTGCCTGTGCTTCTGCCCCTGGTGAGCGCGC
TGGTGTGGCTGCCGTCGACCCATCAGGCCGAGGCGCTGGCGCATGCGTCGTCCCGCGCCTGGATGGGGCTAGCTTACGTG
TCGGCCTTTTCCATGTTCATCGGCTTCCTGTTCTGGTACTCCGGCCTGGCCGCCGGCGGTGTTGCGCGGGTCGGGCAGAT
ACAATTGCTGCAACCTTTCATGACGTTGATCGGCGGCTGGCTGCTGCTGGGTGAATCGCTTGACGCGCCCACCGTGTTGT
TTGCGCTGGCTGTGATTGCCGTGGTCGGCATCGGCCGGCGAACGTCGGTACGCCGATAG

Upstream 100 bases:

>100_bases
CGCCACCGGCGAAATCGGCCGCGTGATCGTCACCAAGATCGAAAAAAAGAGCCGCCAGAACCGACGCGTGGCCGTGGCGT
TTGCAGATTAAGTGGCCACC

Downstream 100 bases:

>100_bases
CAACGTCTTCCCTCTTTTGTTGACCGCACTTACCAAGGAGTCTTCATGACCGCCTCGCACGACGCTCAGGCCAAGCTCAA
GCAACTCGGCATCGAACTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MNKSAALPMQHADHAERRGLLLGLIGVAIFSQTLPFTRMAVAELDATFVALARAVLASVLALAMLAATGAFSAAKRPRGH
QWWQLAVTAMGVVVGFPLFSSLAMRDVPAAHGAIITGLLPLATAIFAAWFGRERPSAGFWLCALAGSVLVVSFALLQGAG
SLHRADWLLFAAMVTGALGYATGGKLARELGGTQTIAWALIVSLPVLLPLVSALVWLPSTHQAEALAHASSRAWMGLAYV
SAFSMFIGFLFWYSGLAAGGVARVGQIQLLQPFMTLIGGWLLLGESLDAPTVLFALAVIAVVGIGRRTSVRR

Sequences:

>Translated_312_residues
MNKSAALPMQHADHAERRGLLLGLIGVAIFSQTLPFTRMAVAELDATFVALARAVLASVLALAMLAATGAFSAAKRPRGH
QWWQLAVTAMGVVVGFPLFSSLAMRDVPAAHGAIITGLLPLATAIFAAWFGRERPSAGFWLCALAGSVLVVSFALLQGAG
SLHRADWLLFAAMVTGALGYATGGKLARELGGTQTIAWALIVSLPVLLPLVSALVWLPSTHQAEALAHASSRAWMGLAYV
SAFSMFIGFLFWYSGLAAGGVARVGQIQLLQPFMTLIGGWLLLGESLDAPTVLFALAVIAVVGIGRRTSVRR
>Mature_312_residues
MNKSAALPMQHADHAERRGLLLGLIGVAIFSQTLPFTRMAVAELDATFVALARAVLASVLALAMLAATGAFSAAKRPRGH
QWWQLAVTAMGVVVGFPLFSSLAMRDVPAAHGAIITGLLPLATAIFAAWFGRERPSAGFWLCALAGSVLVVSFALLQGAG
SLHRADWLLFAAMVTGALGYATGGKLARELGGTQTIAWALIVSLPVLLPLVSALVWLPSTHQAEALAHASSRAWMGLAYV
SAFSMFIGFLFWYSGLAAGGVARVGQIQLLQPFMTLIGGWLLLGESLDAPTVLFALAVIAVVGIGRRTSVRR

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 32756; Mature: 32756

Theoretical pI: Translated: 11.52; Mature: 11.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKSAALPMQHADHAERRGLLLGLIGVAIFSQTLPFTRMAVAELDATFVALARAVLASVL
CCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ALAMLAATGAFSAAKRPRGHQWWQLAVTAMGVVVGFPLFSSLAMRDVPAAHGAIITGLLP
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
LATAIFAAWFGRERPSAGFWLCALAGSVLVVSFALLQGAGSLHRADWLLFAAMVTGALGY
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
ATGGKLARELGGTQTIAWALIVSLPVLLPLVSALVWLPSTHQAEALAHASSRAWMGLAYV
CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
SAFSMFIGFLFWYSGLAAGGVARVGQIQLLQPFMTLIGGWLLLGESLDAPTVLFALAVIA
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
VVGIGRRTSVRR
HHCCCCCCCCCC
>Mature Secondary Structure
MNKSAALPMQHADHAERRGLLLGLIGVAIFSQTLPFTRMAVAELDATFVALARAVLASVL
CCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ALAMLAATGAFSAAKRPRGHQWWQLAVTAMGVVVGFPLFSSLAMRDVPAAHGAIITGLLP
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
LATAIFAAWFGRERPSAGFWLCALAGSVLVVSFALLQGAGSLHRADWLLFAAMVTGALGY
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
ATGGKLARELGGTQTIAWALIVSLPVLLPLVSALVWLPSTHQAEALAHASSRAWMGLAYV
CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
SAFSMFIGFLFWYSGLAAGGVARVGQIQLLQPFMTLIGGWLLLGESLDAPTVLFALAVIA
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
VVGIGRRTSVRR
HHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]