| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
Click here to switch to the map view.
The map label for this gene is 187927928
Identifier: 187927928
GI number: 187927928
Start: 880005
End: 880535
Strand: Direct
Name: 187927928
Synonym: Rpic_0833
Alternate gene names: NA
Gene position: 880005-880535 (Clockwise)
Preceding gene: 187927927
Following gene: 187927929
Centisome position: 22.32
GC content: 66.85
Gene sequence:
>531_bases ATGAGCTACCTCACCACCGTCTTCGACCTGTTCTGGCACTTTCTTGTGCTGTCGTTTCTCGCCATCGGCGGGGCCAGCTC GACGCTGCCCGACATGCACCGCTTTCTGGTCGACACCCGGCACTACATGACGAGCGAGCAGTTGAGCGCCATGTACGCCA TCTCGCAGGCCGCACCGGGCCCCAACGTGCTCTTCGTTGAGTTGTTCGGCTGGCAGGCGGCGGGTCTGGGTGGGGCGATT GCCTCGCTGGTCGGCATCTGCGGGCCATCGTGCGTAATTGCTGCCGTCATCGCGCGCGTCATGGACCGCAAGCCTGACGC GCGCTGGATTGCGCTGGTCCGCCGTGGCCTCGCACCGCTCACGATCGGCCTGCTGTTCTCCACCGGCTGGGTGCTGGCGC GCGGCGCAGACAGCAGCTTCAGCACCATTGCGCTGACCGTGGCGACGGTCGTGGCGTCCTCCTTCACCCGCGTCCACCCG CTGGTGCTGGTGGGGCTGGGGGCATTGGTCGGCGGTATGGGCTGGGTGTAG
Upstream 100 bases:
>100_bases TGGCGGTTTTCCTGACCATTGGCGTCCTGCAGTGGCCGCTGCTTCCCGTGATGCTGGTGCTGATTCCGCTCGCACTCGTG CTCGAATGGTGGGCGATGCG
Downstream 100 bases:
>100_bases CGCCCGCGCCGTCCGGCCTGCGAAATCCAAGGCGGACGCATGTCCGCCTTTTTTCTTGGCCCGCTCGCCACCGAGATGGG CGCACAGCCCTCGGGAATAC
Product: Chromate transporter
Products: NA
Alternate protein names: Transmembrane Protein; ChrA Half Sized-Like Protein; Chromate Efflux Pump; Chromate Transporter Family; Chromate Transporter ChrA; Subunit Of Chromate Transporter; CHR Transporter
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MSYLTTVFDLFWHFLVLSFLAIGGASSTLPDMHRFLVDTRHYMTSEQLSAMYAISQAAPGPNVLFVELFGWQAAGLGGAI ASLVGICGPSCVIAAVIARVMDRKPDARWIALVRRGLAPLTIGLLFSTGWVLARGADSSFSTIALTVATVVASSFTRVHP LVLVGLGALVGGMGWV
Sequences:
>Translated_176_residues MSYLTTVFDLFWHFLVLSFLAIGGASSTLPDMHRFLVDTRHYMTSEQLSAMYAISQAAPGPNVLFVELFGWQAAGLGGAI ASLVGICGPSCVIAAVIARVMDRKPDARWIALVRRGLAPLTIGLLFSTGWVLARGADSSFSTIALTVATVVASSFTRVHP LVLVGLGALVGGMGWV >Mature_175_residues SYLTTVFDLFWHFLVLSFLAIGGASSTLPDMHRFLVDTRHYMTSEQLSAMYAISQAAPGPNVLFVELFGWQAAGLGGAIA SLVGICGPSCVIAAVIARVMDRKPDARWIALVRRGLAPLTIGLLFSTGWVLARGADSSFSTIALTVATVVASSFTRVHPL VLVGLGALVGGMGWV
Specific function: Unknown
COG id: COG2059
COG function: function code P; Chromate transport protein ChrA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18627; Mature: 18496
Theoretical pI: Translated: 8.76; Mature: 8.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYLTTVFDLFWHFLVLSFLAIGGASSTLPDMHRFLVDTRHYMTSEQLSAMYAISQAAPG CHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PNVLFVELFGWQAAGLGGAIASLVGICGPSCVIAAVIARVMDRKPDARWIALVRRGLAPL CCEEEEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHH TIGLLFSTGWVLARGADSSFSTIALTVATVVASSFTRVHPLVLVGLGALVGGMGWV HHHHHHHCCHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SYLTTVFDLFWHFLVLSFLAIGGASSTLPDMHRFLVDTRHYMTSEQLSAMYAISQAAPG HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PNVLFVELFGWQAAGLGGAIASLVGICGPSCVIAAVIARVMDRKPDARWIALVRRGLAPL CCEEEEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHH TIGLLFSTGWVLARGADSSFSTIALTVATVVASSFTRVHPLVLVGLGALVGGMGWV HHHHHHHCCHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA