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The map label for this gene is nudC [H]

Identifier: 187927851

GI number: 187927851

Start: 794772

End: 795353

Strand: Direct

Name: nudC [H]

Synonym: Rpic_0755

Alternate gene names: 187927851

Gene position: 794772-795353 (Clockwise)

Preceding gene: 187927850

Following gene: 187927852

Centisome position: 20.16

GC content: 63.4

Gene sequence:

>582_bases
ATGAGCTTCGACTACCGTTTCTGTCCGCAATGCGCCACGCCGCTCGTCGAGCAGCACAATGCCGGTCGCCTGCGCATCGC
GTGCCCGGGGCAGGACTGCGGCTTCGTGCATTGGAACAATCCGTTGCCCGTCCTGGCGGCGGTTGTCGAATATCGCGGGC
AGATGTTCCTGGCGCGCAATGCACTGTGGCCGGAGGGCATGTTCGCGCTCGTCACGGGCTTTCTCGAACGCGACGAGACG
CCCGAAGAGGGCATCGCCCGTGAGCTGAAGGAAGAGACGAACCTCGACGCTCAATCGATCTCGCTGATCGGCGTGTATGA
GTTCATCCGCAAGAACGAACTGATCATCGCGTACCACGTGGTGGCCGATGGCGAGATCGCGCTGTCGGAAGAGTTGGTTG
AATACCGCCTGAAGCCGTTCGAGAAAGTCCGCCCCTGGACGGCCGGCACTGGTTATGCCGTCGCCGATTTCCTGACCGCG
CGCGGGCTGCCCGTCAGCTACATCGACATCCGTACCGGCGAACCGGCCGAGCCGCCGCCGCGCCAGTGGCAACCCACACG
GCTCGTTACAATCCCGGAATGA

Upstream 100 bases:

>100_bases
GCCTGATGTGCTCGTGGGACGTGCAACCGGAGACGGTGGAAGCCTTTGCCGCCGATATTCGCGCAGCCTGCGCGCAGGCC
GTTTAATCCATCTGACTGCC

Downstream 100 bases:

>100_bases
CTGATGCGAGCGGCACTGCGCCGCTTGCCCGTACCACTGAGGAAGACATGGAGTTTCAAAAGGAAATCGACGCGCGCGGC
CTGAATTGCCCGCTGCCCAT

Product: NUDIX hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 192

Protein sequence:

>193_residues
MSFDYRFCPQCATPLVEQHNAGRLRIACPGQDCGFVHWNNPLPVLAAVVEYRGQMFLARNALWPEGMFALVTGFLERDET
PEEGIARELKEETNLDAQSISLIGVYEFIRKNELIIAYHVVADGEIALSEELVEYRLKPFEKVRPWTAGTGYAVADFLTA
RGLPVSYIDIRTGEPAEPPPRQWQPTRLVTIPE

Sequences:

>Translated_193_residues
MSFDYRFCPQCATPLVEQHNAGRLRIACPGQDCGFVHWNNPLPVLAAVVEYRGQMFLARNALWPEGMFALVTGFLERDET
PEEGIARELKEETNLDAQSISLIGVYEFIRKNELIIAYHVVADGEIALSEELVEYRLKPFEKVRPWTAGTGYAVADFLTA
RGLPVSYIDIRTGEPAEPPPRQWQPTRLVTIPE
>Mature_192_residues
SFDYRFCPQCATPLVEQHNAGRLRIACPGQDCGFVHWNNPLPVLAAVVEYRGQMFLARNALWPEGMFALVTGFLERDETP
EEGIARELKEETNLDAQSISLIGVYEFIRKNELIIAYHVVADGEIALSEELVEYRLKPFEKVRPWTAGTGYAVADFLTAR
GLPVSYIDIRTGEPAEPPPRQWQPTRLVTIPE

Specific function: Unknown

COG id: COG1051

COG function: function code F; ADP-ribose pyrophosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015375
- InterPro:   IPR022925
- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR015376 [H]

Pfam domain/function: PF00293 NUDIX; PF09296 NUDIX-like; PF09297 zf-NADH-PPase [H]

EC number: =3.6.1.22 [H]

Molecular weight: Translated: 21807; Mature: 21676

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFDYRFCPQCATPLVEQHNAGRLRIACPGQDCGFVHWNNPLPVLAAVVEYRGQMFLARN
CCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCEEEECCCHHHHHHHHHHCCCEEEECC
ALWPEGMFALVTGFLERDETPEEGIARELKEETNLDAQSISLIGVYEFIRKNELIIAYHV
CCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEEE
VADGEIALSEELVEYRLKPFEKVRPWTAGTGYAVADFLTARGLPVSYIDIRTGEPAEPPP
EECCCCHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCC
RQWQPTRLVTIPE
CCCCCCEEEECCC
>Mature Secondary Structure 
SFDYRFCPQCATPLVEQHNAGRLRIACPGQDCGFVHWNNPLPVLAAVVEYRGQMFLARN
CCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCEEEECCCHHHHHHHHHHCCCEEEECC
ALWPEGMFALVTGFLERDETPEEGIARELKEETNLDAQSISLIGVYEFIRKNELIIAYHV
CCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEEE
VADGEIALSEELVEYRLKPFEKVRPWTAGTGYAVADFLTARGLPVSYIDIRTGEPAEPPP
EECCCCHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCC
RQWQPTRLVTIPE
CCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA