| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is ybcJ [C]
Identifier: 187927831
GI number: 187927831
Start: 771438
End: 771659
Strand: Reverse
Name: ybcJ [C]
Synonym: Rpic_0735
Alternate gene names: 187927831
Gene position: 771659-771438 (Counterclockwise)
Preceding gene: 187927832
Following gene: 187927830
Centisome position: 19.57
GC content: 63.06
Gene sequence:
>222_bases ATGCCCAATATCGATTTCGCCCTGACCACCGAATACATCGAGCTGCACAAGCTGCTCAAGCTCACCGGCGTGGTCGACAG CGGCGGCGCTGGCAAGGCTGTTGTCGCCGATGGTGCGGTCACGGTCGACGGCCAGCCGGAACTGCGCAAGACCGCCAAGA TTCGCGCCGGCCAGGTCGTCATGCTCGGTGACGTGCGCATTGCCGTGCAGGGAATCGACTAA
Upstream 100 bases:
>100_bases GCATGACGCGTTTCCTGCCCGATGTGGGCGACCGCGTCGACATCGACATCAGCGTGGAAGCCACGCCTCAATAAACTCGC AATCACCCCGCAATCCGTTC
Downstream 100 bases:
>100_bases CCCATCGACTAGCGCCTCTGGTGTTTGAAAACGCACCTTGTGCTACGGTGCGGCACCATCACACCATCCATTTCCAGGAG ACTGACCATGCCGATCGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 73; Mature: 72
Protein sequence:
>73_residues MPNIDFALTTEYIELHKLLKLTGVVDSGGAGKAVVADGAVTVDGQPELRKTAKIRAGQVVMLGDVRIAVQGID
Sequences:
>Translated_73_residues MPNIDFALTTEYIELHKLLKLTGVVDSGGAGKAVVADGAVTVDGQPELRKTAKIRAGQVVMLGDVRIAVQGID >Mature_72_residues PNIDFALTTEYIELHKLLKLTGVVDSGGAGKAVVADGAVTVDGQPELRKTAKIRAGQVVMLGDVRIAVQGID
Specific function: Unknown
COG id: COG2501
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7632; Mature: 7501
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: PS50889 S4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNIDFALTTEYIELHKLLKLTGVVDSGGAGKAVVADGAVTVDGQPELRKTAKIRAGQVV CCCCCEEEEHHHHHHHHHHHHHCEECCCCCCCEEEECCEEEECCCCCCHHHCCCCCCCEE MLGDVRIAVQGID EECCEEEEEEECC >Mature Secondary Structure PNIDFALTTEYIELHKLLKLTGVVDSGGAGKAVVADGAVTVDGQPELRKTAKIRAGQVV CCCCEEEEHHHHHHHHHHHHHCEECCCCCCCEEEECCEEEECCCCCCHHHCCCCCCCEE MLGDVRIAVQGID EECCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA