| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187927830
Identifier: 187927830
GI number: 187927830
Start: 770967
End: 771350
Strand: Reverse
Name: 187927830
Synonym: Rpic_0734
Alternate gene names: NA
Gene position: 771350-770967 (Counterclockwise)
Preceding gene: 187927831
Following gene: 187927827
Centisome position: 19.56
GC content: 64.58
Gene sequence:
>384_bases ATGCCGATCGCCCTCTGGTGCGTTCTGGTGGCAGCGGTGTTGCCGATCGTGTGCGTCGGCATCGCCAAAGCCAAAGGCCC GCGGTACGACAACCGCAACCCGCGCGGGTGGCTTGCACAGCAGACCGGCGTAGCGGCCCGTGCCGCCGCCGCACAGCAGA ATCACTTTGAAGCGTTTCCGCTCTTTGCGGTGGCCGTGCTGGTGGCCATCCTGGGCGGCGGCGTCATCGACCGCATCAAC CTGCTGGCCATCGCATTTATCGTGGTGCGCGTGCTGTACACGGTGTGCTATCTCGCCAACTGGGCACCGCTGCGTTCGCT GATGTGGTTTGCGGGCTTTGCCTTGTGCGTTGCGCTGTTCGTGCAACCGGCCTTTGCGCACTGA
Upstream 100 bases:
>100_bases GGGAATCGACTAACCCATCGACTAGCGCCTCTGGTGTTTGAAAACGCACCTTGTGCTACGGTGCGGCACCATCACACCAT CCATTTCCAGGAGACTGACC
Downstream 100 bases:
>100_bases ACATCCGCTCCGCCAGGAAGAAACGGCGCCCAGGTGGCGCCGTTTTCTTTGGGCAATGCAGATTACGTCGAAGCATCCGG TGGCACCGACGGCGCGCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 127; Mature: 126
Protein sequence:
>127_residues MPIALWCVLVAAVLPIVCVGIAKAKGPRYDNRNPRGWLAQQTGVAARAAAAQQNHFEAFPLFAVAVLVAILGGGVIDRIN LLAIAFIVVRVLYTVCYLANWAPLRSLMWFAGFALCVALFVQPAFAH
Sequences:
>Translated_127_residues MPIALWCVLVAAVLPIVCVGIAKAKGPRYDNRNPRGWLAQQTGVAARAAAAQQNHFEAFPLFAVAVLVAILGGGVIDRIN LLAIAFIVVRVLYTVCYLANWAPLRSLMWFAGFALCVALFVQPAFAH >Mature_126_residues PIALWCVLVAAVLPIVCVGIAKAKGPRYDNRNPRGWLAQQTGVAARAAAAQQNHFEAFPLFAVAVLVAILGGGVIDRINL LAIAFIVVRVLYTVCYLANWAPLRSLMWFAGFALCVALFVQPAFAH
Specific function: Unknown
COG id: COG3686
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13691; Mature: 13559
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIALWCVLVAAVLPIVCVGIAKAKGPRYDNRNPRGWLAQQTGVAARAAAAQQNHFEAFP CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHH LFAVAVLVAILGGGVIDRINLLAIAFIVVRVLYTVCYLANWAPLRSLMWFAGFALCVALF HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH VQPAFAH HHHHCCC >Mature Secondary Structure PIALWCVLVAAVLPIVCVGIAKAKGPRYDNRNPRGWLAQQTGVAARAAAAQQNHFEAFP CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHH LFAVAVLVAILGGGVIDRINLLAIAFIVVRVLYTVCYLANWAPLRSLMWFAGFALCVALF HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH VQPAFAH HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA