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The map label for this gene is ybbM [C]

Identifier: 187927794

GI number: 187927794

Start: 735636

End: 736445

Strand: Reverse

Name: ybbM [C]

Synonym: Rpic_0698

Alternate gene names: 187927794

Gene position: 736445-735636 (Counterclockwise)

Preceding gene: 187927795

Following gene: 187927793

Centisome position: 18.68

GC content: 65.8

Gene sequence:

>810_bases
ATGAACGGCCAGGACCTCTCCCTTTCCGCCTGGCAGGTCGGCATTGCGGCTGCGCTGATCCTCGTGAACGGTGCGCTGTC
CATCGGCCTGGGGCTTGGGCTCGAGCGACGCCTGGCGTGGGCGGCCGTGCGCACCGTGGTGCAATTGCTGGCGGTGGGCT
TCGTGCTCGAATGGGTATTCGCCCACGCGCAATGGGCGGTGGTGCTGGGCATCGTGACCGTCATGACGCTCATTGCAGGG
CACGCGACTGGCAGTCGAGGCGCACGCGGCTATGCCGGACTGCGGTTGGACGGCACGTTGTCGGTCTTCGGCAGCACATG
GCTGATCGGAGCGATCGGGCTGGTGGTCGTACTGCATGCGCATCCGTGGTATCAGCCGCAATACGCCATCCCGATCATGG
GGATGATTCTTGGCAACACGCTCACCGGCGTAGGCCTGGCGCTCGAGCGCATGACCGGCGAGCTGACTGCCACGCGCGAC
CAAGTGGAGACGATTCTTGCGCTCGGCGGCACGCACTGGGAAGCGGCGCGCAATGCAGCACGAACGGCCGTGCGCGCCGG
CATGACACCGATCATCAACCAGATGACCGTGGTGGGCGTGGTGAGCCTGCCCGGCATGATGACGGGCCAGGTACTGGCCG
GGCAGTCTCCACTGGAGGCCGTGCGCTACCAGATCGTCATCATGTTCCTGCTGGCGGCAGCTTCTGGGCTGGGGACGGTT
GCGGCCGTGCTGCTGGCCTATCGCCGGCTGTTCAGCCGTGAGCACCAGTTGCTGACTGCACGCATCACACAACGCGGCGG
AACGAAATAG

Upstream 100 bases:

>100_bases
ATGCGTGGATGTGGGTGACACACGATTCGGCGCAAGCAGAGCGCATCGGCCGGCAGCATTGGAAGATGGTTGCCGGGCAA
CTCGACACGGGGCCCGAGCG

Downstream 100 bases:

>100_bases
CATGCCGATCGCCCTATCCTGCGGCCTCGTGCTGCTCAACGAAGATGGCGAGGTGCTGCTCGCCCACGCCACTGAAACGC
GCCACTGGGACATCCCCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MNGQDLSLSAWQVGIAAALILVNGALSIGLGLGLERRLAWAAVRTVVQLLAVGFVLEWVFAHAQWAVVLGIVTVMTLIAG
HATGSRGARGYAGLRLDGTLSVFGSTWLIGAIGLVVVLHAHPWYQPQYAIPIMGMILGNTLTGVGLALERMTGELTATRD
QVETILALGGTHWEAARNAARTAVRAGMTPIINQMTVVGVVSLPGMMTGQVLAGQSPLEAVRYQIVIMFLLAAASGLGTV
AAVLLAYRRLFSREHQLLTARITQRGGTK

Sequences:

>Translated_269_residues
MNGQDLSLSAWQVGIAAALILVNGALSIGLGLGLERRLAWAAVRTVVQLLAVGFVLEWVFAHAQWAVVLGIVTVMTLIAG
HATGSRGARGYAGLRLDGTLSVFGSTWLIGAIGLVVVLHAHPWYQPQYAIPIMGMILGNTLTGVGLALERMTGELTATRD
QVETILALGGTHWEAARNAARTAVRAGMTPIINQMTVVGVVSLPGMMTGQVLAGQSPLEAVRYQIVIMFLLAAASGLGTV
AAVLLAYRRLFSREHQLLTARITQRGGTK
>Mature_269_residues
MNGQDLSLSAWQVGIAAALILVNGALSIGLGLGLERRLAWAAVRTVVQLLAVGFVLEWVFAHAQWAVVLGIVTVMTLIAG
HATGSRGARGYAGLRLDGTLSVFGSTWLIGAIGLVVVLHAHPWYQPQYAIPIMGMILGNTLTGVGLALERMTGELTATRD
QVETILALGGTHWEAARNAARTAVRAGMTPIINQMTVVGVVSLPGMMTGQVLAGQSPLEAVRYQIVIMFLLAAASGLGTV
AAVLLAYRRLFSREHQLLTARITQRGGTK

Specific function: Unknown

COG id: COG0390

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0014 family [H]

Homologues:

Organism=Escherichia coli, GI87081746, Length=270, Percent_Identity=28.8888888888889, Blast_Score=136, Evalue=1e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005226 [H]

Pfam domain/function: PF03649 UPF0014 [H]

EC number: NA

Molecular weight: Translated: 28382; Mature: 28382

Theoretical pI: Translated: 11.15; Mature: 11.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGQDLSLSAWQVGIAAALILVNGALSIGLGLGLERRLAWAAVRTVVQLLAVGFVLEWVF
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AHAQWAVVLGIVTVMTLIAGHATGSRGARGYAGLRLDGTLSVFGSTWLIGAIGLVVVLHA
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHC
HPWYQPQYAIPIMGMILGNTLTGVGLALERMTGELTATRDQVETILALGGTHWEAARNAA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHH
RTAVRAGMTPIINQMTVVGVVSLPGMMTGQVLAGQSPLEAVRYQIVIMFLLAAASGLGTV
HHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHH
AAVLLAYRRLFSREHQLLTARITQRGGTK
HHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNGQDLSLSAWQVGIAAALILVNGALSIGLGLGLERRLAWAAVRTVVQLLAVGFVLEWVF
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AHAQWAVVLGIVTVMTLIAGHATGSRGARGYAGLRLDGTLSVFGSTWLIGAIGLVVVLHA
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHC
HPWYQPQYAIPIMGMILGNTLTGVGLALERMTGELTATRDQVETILALGGTHWEAARNAA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHH
RTAVRAGMTPIINQMTVVGVVSLPGMMTGQVLAGQSPLEAVRYQIVIMFLLAAASGLGTV
HHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHH
AAVLLAYRRLFSREHQLLTARITQRGGTK
HHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]