Definition Ralstonia pickettii 12J chromosome chromosome 1, complete sequence.
Accession NC_010682
Length 3,942,557

Click here to switch to the map view.

The map label for this gene is yjgN [H]

Identifier: 187927676

GI number: 187927676

Start: 614249

End: 615322

Strand: Direct

Name: yjgN [H]

Synonym: Rpic_0580

Alternate gene names: 187927676

Gene position: 614249-615322 (Clockwise)

Preceding gene: 187927675

Following gene: 187927677

Centisome position: 15.58

GC content: 61.55

Gene sequence:

>1074_bases
ATGAACGACATCGCACGCGAGTCCGTCCTGGGCAGCGCCCCCGCTCCAGCTGCGCCGCAACCCTTGCGGCTGCGCTTTAT
TGGCAGCGGCTCGGAATACTTCCGCATCTGGATCGTCAACCTGCTGCTGACCATCGTCACGCTGGGCATCTACTCGGCCT
GGGCGAAGGTCCGCACGCTTCAGTATTTCTATCGCAACACCCAACTGGCGGGGTCCAGCTTCGATTATCACGGCAGCCCG
ATCGCCATTCTCAAGGGCCGCGCGATCATTTTCGTGCTGGCGTTTGCATTCAACCTCCTTGGTCATTCGTCGCCGCTGTT
GGGGCTGGCACTGCTTATCGTGATGGCCGCCGCGTTTCCGTGGCTGCTCGTGCGCTCGCTACGTTTCCGCATGGCCAATT
CCAGCTACCGCGGCTTGCGCTTCGCCTTTACGGGCAAGGATGCCGAGGGCTACATGGTGTTTCTGGTGTGGCCGATCCTC
AGCGTGCTCTCGCTGTACCTGCTCGCACCGCTGGCGCACCAGCGCTTCAAGCGTTTCCAGCACAAGAACACGCGCTTCGG
TACCGCGCAGTTCGATTTTTCCGGCACGCCGGGCAACTTCTATGGCGTGTATCTGCGCACCTTCGGGCTGGCGATACTGG
CGCTCGTGGTGGCCTCTTGCCTCGCGTTGCTACTGGGTGTGTCGTTGCACCGCGCGCCGGGAGTGGGGCAGATCTTCGGC
TTCATCCTCATCGGCCTGTTCATGTATGCCGCGATGCTGTTCCTGACGCCTTATTTCCTGTCGCGCCTGCAGAACGTGGT
GTGGAACCACACCACGCTGGGCGCGCATCGCTTCCAGAGCCAGGTGGGTGCGGGCAAGCTGTTCTGGATTTTCGTATCCA
ATGCGGTGCTGATCCTGATCACCATCGGCTTGTTCACGCCGTTCGCACGCGTGCGCACGGCACGCTACAAGCTCGACTCG
GTGACGATGATCGCGGCCGGTTCGCTAGATACCTTCGTTGCCGGCGAAACCACCAACGTAGGCGCGCTGGGCGACGCCAC
AGTGGACTGGTACGACATCGATATCGCGCTGTAA

Upstream 100 bases:

>100_bases
GGCTTCGCTACAATCGGCCCACCCGCGAGCCTCAGCGTCGTCACGTATCGATGAGCGTCCTGAAGCGGGGCACGATAACA
ACTCAGGGAAGGGAAAACAG

Downstream 100 bases:

>100_bases
ACGCGCTGCAAGGCAGGGGCACCCGCTGTGATTCTCGCGACCTACTTCGACGGCCGTACCTCGCGCGCGCAACCCGTGCG
TCTTGCTGTCGAGGCGGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: ORF X [H]

Number of amino acids: Translated: 357; Mature: 357

Protein sequence:

>357_residues
MNDIARESVLGSAPAPAAPQPLRLRFIGSGSEYFRIWIVNLLLTIVTLGIYSAWAKVRTLQYFYRNTQLAGSSFDYHGSP
IAILKGRAIIFVLAFAFNLLGHSSPLLGLALLIVMAAAFPWLLVRSLRFRMANSSYRGLRFAFTGKDAEGYMVFLVWPIL
SVLSLYLLAPLAHQRFKRFQHKNTRFGTAQFDFSGTPGNFYGVYLRTFGLAILALVVASCLALLLGVSLHRAPGVGQIFG
FILIGLFMYAAMLFLTPYFLSRLQNVVWNHTTLGAHRFQSQVGAGKLFWIFVSNAVLILITIGLFTPFARVRTARYKLDS
VTMIAAGSLDTFVAGETTNVGALGDATVDWYDIDIAL

Sequences:

>Translated_357_residues
MNDIARESVLGSAPAPAAPQPLRLRFIGSGSEYFRIWIVNLLLTIVTLGIYSAWAKVRTLQYFYRNTQLAGSSFDYHGSP
IAILKGRAIIFVLAFAFNLLGHSSPLLGLALLIVMAAAFPWLLVRSLRFRMANSSYRGLRFAFTGKDAEGYMVFLVWPIL
SVLSLYLLAPLAHQRFKRFQHKNTRFGTAQFDFSGTPGNFYGVYLRTFGLAILALVVASCLALLLGVSLHRAPGVGQIFG
FILIGLFMYAAMLFLTPYFLSRLQNVVWNHTTLGAHRFQSQVGAGKLFWIFVSNAVLILITIGLFTPFARVRTARYKLDS
VTMIAAGSLDTFVAGETTNVGALGDATVDWYDIDIAL
>Mature_357_residues
MNDIARESVLGSAPAPAAPQPLRLRFIGSGSEYFRIWIVNLLLTIVTLGIYSAWAKVRTLQYFYRNTQLAGSSFDYHGSP
IAILKGRAIIFVLAFAFNLLGHSSPLLGLALLIVMAAAFPWLLVRSLRFRMANSSYRGLRFAFTGKDAEGYMVFLVWPIL
SVLSLYLLAPLAHQRFKRFQHKNTRFGTAQFDFSGTPGNFYGVYLRTFGLAILALVVASCLALLLGVSLHRAPGVGQIFG
FILIGLFMYAAMLFLTPYFLSRLQNVVWNHTTLGAHRFQSQVGAGKLFWIFVSNAVLILITIGLFTPFARVRTARYKLDS
VTMIAAGSLDTFVAGETTNVGALGDATVDWYDIDIAL

Specific function: Unknown

COG id: COG4269

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010295 [H]

Pfam domain/function: PF05987 DUF898 [H]

EC number: NA

Molecular weight: Translated: 39461; Mature: 39461

Theoretical pI: Translated: 10.54; Mature: 10.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDIARESVLGSAPAPAAPQPLRLRFIGSGSEYFRIWIVNLLLTIVTLGIYSAWAKVRTL
CCCHHHHHHCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QYFYRNTQLAGSSFDYHGSPIAILKGRAIIFVLAFAFNLLGHSSPLLGLALLIVMAAAFP
HHHHHCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
WLLVRSLRFRMANSSYRGLRFAFTGKDAEGYMVFLVWPILSVLSLYLLAPLAHQRFKRFQ
HHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
HKNTRFGTAQFDFSGTPGNFYGVYLRTFGLAILALVVASCLALLLGVSLHRAPGVGQIFG
CCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHH
FILIGLFMYAAMLFLTPYFLSRLQNVVWNHTTLGAHRFQSQVGAGKLFWIFVSNAVLILI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEHHHHHHHHH
TIGLFTPFARVRTARYKLDSVTMIAAGSLDTFVAGETTNVGALGDATVDWYDIDIAL
HHHHHHHHHHHHHHHHHHCCEEEEECCCCCCEECCCCCCCCCCCCCEEEEEEEEEEC
>Mature Secondary Structure
MNDIARESVLGSAPAPAAPQPLRLRFIGSGSEYFRIWIVNLLLTIVTLGIYSAWAKVRTL
CCCHHHHHHCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QYFYRNTQLAGSSFDYHGSPIAILKGRAIIFVLAFAFNLLGHSSPLLGLALLIVMAAAFP
HHHHHCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
WLLVRSLRFRMANSSYRGLRFAFTGKDAEGYMVFLVWPILSVLSLYLLAPLAHQRFKRFQ
HHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
HKNTRFGTAQFDFSGTPGNFYGVYLRTFGLAILALVVASCLALLLGVSLHRAPGVGQIFG
CCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHH
FILIGLFMYAAMLFLTPYFLSRLQNVVWNHTTLGAHRFQSQVGAGKLFWIFVSNAVLILI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEHHHHHHHHH
TIGLFTPFARVRTARYKLDSVTMIAAGSLDTFVAGETTNVGALGDATVDWYDIDIAL
HHHHHHHHHHHHHHHHHHCCEEEEECCCCCCEECCCCCCCCCCCCCEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11677609; 8253666 [H]