| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is yjgN [H]
Identifier: 187927676
GI number: 187927676
Start: 614249
End: 615322
Strand: Direct
Name: yjgN [H]
Synonym: Rpic_0580
Alternate gene names: 187927676
Gene position: 614249-615322 (Clockwise)
Preceding gene: 187927675
Following gene: 187927677
Centisome position: 15.58
GC content: 61.55
Gene sequence:
>1074_bases ATGAACGACATCGCACGCGAGTCCGTCCTGGGCAGCGCCCCCGCTCCAGCTGCGCCGCAACCCTTGCGGCTGCGCTTTAT TGGCAGCGGCTCGGAATACTTCCGCATCTGGATCGTCAACCTGCTGCTGACCATCGTCACGCTGGGCATCTACTCGGCCT GGGCGAAGGTCCGCACGCTTCAGTATTTCTATCGCAACACCCAACTGGCGGGGTCCAGCTTCGATTATCACGGCAGCCCG ATCGCCATTCTCAAGGGCCGCGCGATCATTTTCGTGCTGGCGTTTGCATTCAACCTCCTTGGTCATTCGTCGCCGCTGTT GGGGCTGGCACTGCTTATCGTGATGGCCGCCGCGTTTCCGTGGCTGCTCGTGCGCTCGCTACGTTTCCGCATGGCCAATT CCAGCTACCGCGGCTTGCGCTTCGCCTTTACGGGCAAGGATGCCGAGGGCTACATGGTGTTTCTGGTGTGGCCGATCCTC AGCGTGCTCTCGCTGTACCTGCTCGCACCGCTGGCGCACCAGCGCTTCAAGCGTTTCCAGCACAAGAACACGCGCTTCGG TACCGCGCAGTTCGATTTTTCCGGCACGCCGGGCAACTTCTATGGCGTGTATCTGCGCACCTTCGGGCTGGCGATACTGG CGCTCGTGGTGGCCTCTTGCCTCGCGTTGCTACTGGGTGTGTCGTTGCACCGCGCGCCGGGAGTGGGGCAGATCTTCGGC TTCATCCTCATCGGCCTGTTCATGTATGCCGCGATGCTGTTCCTGACGCCTTATTTCCTGTCGCGCCTGCAGAACGTGGT GTGGAACCACACCACGCTGGGCGCGCATCGCTTCCAGAGCCAGGTGGGTGCGGGCAAGCTGTTCTGGATTTTCGTATCCA ATGCGGTGCTGATCCTGATCACCATCGGCTTGTTCACGCCGTTCGCACGCGTGCGCACGGCACGCTACAAGCTCGACTCG GTGACGATGATCGCGGCCGGTTCGCTAGATACCTTCGTTGCCGGCGAAACCACCAACGTAGGCGCGCTGGGCGACGCCAC AGTGGACTGGTACGACATCGATATCGCGCTGTAA
Upstream 100 bases:
>100_bases GGCTTCGCTACAATCGGCCCACCCGCGAGCCTCAGCGTCGTCACGTATCGATGAGCGTCCTGAAGCGGGGCACGATAACA ACTCAGGGAAGGGAAAACAG
Downstream 100 bases:
>100_bases ACGCGCTGCAAGGCAGGGGCACCCGCTGTGATTCTCGCGACCTACTTCGACGGCCGTACCTCGCGCGCGCAACCCGTGCG TCTTGCTGTCGAGGCGGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: ORF X [H]
Number of amino acids: Translated: 357; Mature: 357
Protein sequence:
>357_residues MNDIARESVLGSAPAPAAPQPLRLRFIGSGSEYFRIWIVNLLLTIVTLGIYSAWAKVRTLQYFYRNTQLAGSSFDYHGSP IAILKGRAIIFVLAFAFNLLGHSSPLLGLALLIVMAAAFPWLLVRSLRFRMANSSYRGLRFAFTGKDAEGYMVFLVWPIL SVLSLYLLAPLAHQRFKRFQHKNTRFGTAQFDFSGTPGNFYGVYLRTFGLAILALVVASCLALLLGVSLHRAPGVGQIFG FILIGLFMYAAMLFLTPYFLSRLQNVVWNHTTLGAHRFQSQVGAGKLFWIFVSNAVLILITIGLFTPFARVRTARYKLDS VTMIAAGSLDTFVAGETTNVGALGDATVDWYDIDIAL
Sequences:
>Translated_357_residues MNDIARESVLGSAPAPAAPQPLRLRFIGSGSEYFRIWIVNLLLTIVTLGIYSAWAKVRTLQYFYRNTQLAGSSFDYHGSP IAILKGRAIIFVLAFAFNLLGHSSPLLGLALLIVMAAAFPWLLVRSLRFRMANSSYRGLRFAFTGKDAEGYMVFLVWPIL SVLSLYLLAPLAHQRFKRFQHKNTRFGTAQFDFSGTPGNFYGVYLRTFGLAILALVVASCLALLLGVSLHRAPGVGQIFG FILIGLFMYAAMLFLTPYFLSRLQNVVWNHTTLGAHRFQSQVGAGKLFWIFVSNAVLILITIGLFTPFARVRTARYKLDS VTMIAAGSLDTFVAGETTNVGALGDATVDWYDIDIAL >Mature_357_residues MNDIARESVLGSAPAPAAPQPLRLRFIGSGSEYFRIWIVNLLLTIVTLGIYSAWAKVRTLQYFYRNTQLAGSSFDYHGSP IAILKGRAIIFVLAFAFNLLGHSSPLLGLALLIVMAAAFPWLLVRSLRFRMANSSYRGLRFAFTGKDAEGYMVFLVWPIL SVLSLYLLAPLAHQRFKRFQHKNTRFGTAQFDFSGTPGNFYGVYLRTFGLAILALVVASCLALLLGVSLHRAPGVGQIFG FILIGLFMYAAMLFLTPYFLSRLQNVVWNHTTLGAHRFQSQVGAGKLFWIFVSNAVLILITIGLFTPFARVRTARYKLDS VTMIAAGSLDTFVAGETTNVGALGDATVDWYDIDIAL
Specific function: Unknown
COG id: COG4269
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010295 [H]
Pfam domain/function: PF05987 DUF898 [H]
EC number: NA
Molecular weight: Translated: 39461; Mature: 39461
Theoretical pI: Translated: 10.54; Mature: 10.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDIARESVLGSAPAPAAPQPLRLRFIGSGSEYFRIWIVNLLLTIVTLGIYSAWAKVRTL CCCHHHHHHCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QYFYRNTQLAGSSFDYHGSPIAILKGRAIIFVLAFAFNLLGHSSPLLGLALLIVMAAAFP HHHHHCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH WLLVRSLRFRMANSSYRGLRFAFTGKDAEGYMVFLVWPILSVLSLYLLAPLAHQRFKRFQ HHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH HKNTRFGTAQFDFSGTPGNFYGVYLRTFGLAILALVVASCLALLLGVSLHRAPGVGQIFG CCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHH FILIGLFMYAAMLFLTPYFLSRLQNVVWNHTTLGAHRFQSQVGAGKLFWIFVSNAVLILI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEHHHHHHHHH TIGLFTPFARVRTARYKLDSVTMIAAGSLDTFVAGETTNVGALGDATVDWYDIDIAL HHHHHHHHHHHHHHHHHHCCEEEEECCCCCCEECCCCCCCCCCCCCEEEEEEEEEEC >Mature Secondary Structure MNDIARESVLGSAPAPAAPQPLRLRFIGSGSEYFRIWIVNLLLTIVTLGIYSAWAKVRTL CCCHHHHHHCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QYFYRNTQLAGSSFDYHGSPIAILKGRAIIFVLAFAFNLLGHSSPLLGLALLIVMAAAFP HHHHHCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH WLLVRSLRFRMANSSYRGLRFAFTGKDAEGYMVFLVWPILSVLSLYLLAPLAHQRFKRFQ HHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH HKNTRFGTAQFDFSGTPGNFYGVYLRTFGLAILALVVASCLALLLGVSLHRAPGVGQIFG CCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHH FILIGLFMYAAMLFLTPYFLSRLQNVVWNHTTLGAHRFQSQVGAGKLFWIFVSNAVLILI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEHHHHHHHHH TIGLFTPFARVRTARYKLDSVTMIAAGSLDTFVAGETTNVGALGDATVDWYDIDIAL HHHHHHHHHHHHHHHHHHCCEEEEECCCCCCEECCCCCCCCCCCCCEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11677609; 8253666 [H]