| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187927644
Identifier: 187927644
GI number: 187927644
Start: 583397
End: 584179
Strand: Direct
Name: 187927644
Synonym: Rpic_0544
Alternate gene names: NA
Gene position: 583397-584179 (Clockwise)
Preceding gene: 187927643
Following gene: 187927648
Centisome position: 14.8
GC content: 61.81
Gene sequence:
>783_bases ATGAAGACTCTGTTCCTGAAACTCTGCGCAGCCGCGCTCGTCGCAACCTCGGCAGCTGCAGCTCACGTCCAGGCTGCCGA GCTGCACGTCATGAGCTCCGGTGGCTTTACCGCCGCCTATAAAGTGCTCGGGCCGAAGTTTGCAGCGCAGACGGGCAACA CGCTCAACACCGCGCTTGGACCGTCGATGGGCAAGTCGCCCGAAGCGATTCCGAATCGGCTTGCGCGCGGCGAGCCAGCG GACGCCGTCATCATGGTCGGCTACGCACTCGACGATCTGATCAAGCAAGGCAAGGTCATCCCGGAATCGCGCGTGGAACT TGCCGATTCGCGCATCGGCATGGTGGTTCGCGATGGCGCAGCAAAGCCCGACATCAGCTCGCCTGAGGCCCTCATGCAAG TGCTGCTGCATGCCAAGTCGATTGCCTACTCGGACAGCGCAAGCGGCGTGTATATCGAGCGCGAGTTGTTCAAGAAGCTC GGCATTGAAGAGCAGGTCAAGGCGAAGGCGAAGATGATTCCGCGCATTCCGGTGGCGTCGGTGGTGGCCACGGGCGACTA CGAGATCGGTTTCCAGCAAGTCAGCGAGTTGCTGCCGGTGCAGGGCGCCACCTTTGTCGGAAAGATTCCGGAGTCGCTGC AGTCGGTCACACGCTTTGCGGCGGGCATTCCCGTTGGGGCACCGCATCCGAAGGAAGCCAAGGCGCTTCTCGACTATCTT GCTTCGCCCGGCGCTCAGGCAGACGTGAAATCGACTGGCCTCGATTCGGTACTTGCGCGTTGA
Upstream 100 bases:
>100_bases CGCTCTATCGCCGCCGCGCGGTGACGTTGGCTCCGGCGCACTGACGCGCAGCACGTTCCGTATATTCACAAGCAACGCAC GACCTGGCACGACCCTCACC
Downstream 100 bases:
>100_bases GGCACGGCGCCCGCGTGGCAGGGCAAGCGCTGCTGGCTATGCATCGCTTGCCATCATGCCGCTGCGCTTCGCTTCAATGA TCATCCGGTGAAATTCCTCC
Product: family 1 extracellular solute-binding protein
Products: NA
Alternate protein names: ABC Transporter Periplasmic Molybdate; ABC Transporter; PROX Protein
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MKTLFLKLCAAALVATSAAAAHVQAAELHVMSSGGFTAAYKVLGPKFAAQTGNTLNTALGPSMGKSPEAIPNRLARGEPA DAVIMVGYALDDLIKQGKVIPESRVELADSRIGMVVRDGAAKPDISSPEALMQVLLHAKSIAYSDSASGVYIERELFKKL GIEEQVKAKAKMIPRIPVASVVATGDYEIGFQQVSELLPVQGATFVGKIPESLQSVTRFAAGIPVGAPHPKEAKALLDYL ASPGAQADVKSTGLDSVLAR
Sequences:
>Translated_260_residues MKTLFLKLCAAALVATSAAAAHVQAAELHVMSSGGFTAAYKVLGPKFAAQTGNTLNTALGPSMGKSPEAIPNRLARGEPA DAVIMVGYALDDLIKQGKVIPESRVELADSRIGMVVRDGAAKPDISSPEALMQVLLHAKSIAYSDSASGVYIERELFKKL GIEEQVKAKAKMIPRIPVASVVATGDYEIGFQQVSELLPVQGATFVGKIPESLQSVTRFAAGIPVGAPHPKEAKALLDYL ASPGAQADVKSTGLDSVLAR >Mature_260_residues MKTLFLKLCAAALVATSAAAAHVQAAELHVMSSGGFTAAYKVLGPKFAAQTGNTLNTALGPSMGKSPEAIPNRLARGEPA DAVIMVGYALDDLIKQGKVIPESRVELADSRIGMVVRDGAAKPDISSPEALMQVLLHAKSIAYSDSASGVYIERELFKKL GIEEQVKAKAKMIPRIPVASVVATGDYEIGFQQVSELLPVQGATFVGKIPESLQSVTRFAAGIPVGAPHPKEAKALLDYL ASPGAQADVKSTGLDSVLAR
Specific function: Unknown
COG id: COG0725
COG function: function code P; ABC-type molybdate transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27120; Mature: 27120
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLFLKLCAAALVATSAAAAHVQAAELHVMSSGGFTAAYKVLGPKFAAQTGNTLNTALG CHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHCCHHHHCCCCCHHHHCC PSMGKSPEAIPNRLARGEPADAVIMVGYALDDLIKQGKVIPESRVELADSRIGMVVRDGA CCCCCCCHHHHHHHHCCCCCCEEEEHHHHHHHHHHCCCCCCHHHHHHHHHHCCEEEECCC AKPDISSPEALMQVLLHAKSIAYSDSASGVYIERELFKKLGIEEQVKAKAKMIPRIPVAS CCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHCCCHHHHHHHHHHCCCCCHHH VVATGDYEIGFQQVSELLPVQGATFVGKIPESLQSVTRFAAGIPVGAPHPKEAKALLDYL HEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH ASPGAQADVKSTGLDSVLAR HCCCCCCCHHHCCHHHHHCC >Mature Secondary Structure MKTLFLKLCAAALVATSAAAAHVQAAELHVMSSGGFTAAYKVLGPKFAAQTGNTLNTALG CHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHCCHHHHCCCCCHHHHCC PSMGKSPEAIPNRLARGEPADAVIMVGYALDDLIKQGKVIPESRVELADSRIGMVVRDGA CCCCCCCHHHHHHHHCCCCCCEEEEHHHHHHHHHHCCCCCCHHHHHHHHHHCCEEEECCC AKPDISSPEALMQVLLHAKSIAYSDSASGVYIERELFKKLGIEEQVKAKAKMIPRIPVAS CCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHCCCHHHHHHHHHHCCCCCHHH VVATGDYEIGFQQVSELLPVQGATFVGKIPESLQSVTRFAAGIPVGAPHPKEAKALLDYL HEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH ASPGAQADVKSTGLDSVLAR HCCCCCCCHHHCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA