| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187927553
Identifier: 187927553
GI number: 187927553
Start: 486839
End: 487147
Strand: Direct
Name: 187927553
Synonym: Rpic_0453
Alternate gene names: NA
Gene position: 486839-487147 (Clockwise)
Preceding gene: 187927552
Following gene: 187927559
Centisome position: 12.35
GC content: 53.72
Gene sequence:
>309_bases ATGGATGCTCATCGCAAGACACCGCTGACCTTCTTCCAGCAAGCCATCCCGGAGCCATTCAAGAACGATAGCAACGCGGA TATCGGTGAAGTCTTCATCGCGCTGATCTATCCCGAGATATTGATCCGCGATGCTACTGGCGATTACATCATCGATTGCC GACAGGACGGGTTCTACGCCGAGGCGGATGACTTCCCGCTGCTGAATTTTCTCGAAATGTTCCCCACGATCTGCGATTCG CTCATCGCAGAATGCACCGCGCTCAAGCAGCGCTACGAACGCTATCTCACCGATTTGCAGTGCTTGTGA
Upstream 100 bases:
>100_bases AACGACGTATCCGAGTGTCCGGGTGTTTTACCCGGCTTTTCGTTGACGCGGAGAGACGTTCAATCCATTGTACTGTTCCA TCGACTGGATCTGCGCATCA
Downstream 100 bases:
>100_bases TGCTGTGCGCATCGAGCATGAGATGGCAAGCTCGGCTGCGCTGCAGCCTGTGCCAACTGATTCTCCGGGGTCATAGCTGA GGCGTGCGAGTTTCGTTGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 102; Mature: 102
Protein sequence:
>102_residues MDAHRKTPLTFFQQAIPEPFKNDSNADIGEVFIALIYPEILIRDATGDYIIDCRQDGFYAEADDFPLLNFLEMFPTICDS LIAECTALKQRYERYLTDLQCL
Sequences:
>Translated_102_residues MDAHRKTPLTFFQQAIPEPFKNDSNADIGEVFIALIYPEILIRDATGDYIIDCRQDGFYAEADDFPLLNFLEMFPTICDS LIAECTALKQRYERYLTDLQCL >Mature_102_residues MDAHRKTPLTFFQQAIPEPFKNDSNADIGEVFIALIYPEILIRDATGDYIIDCRQDGFYAEADDFPLLNFLEMFPTICDS LIAECTALKQRYERYLTDLQCL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11792; Mature: 11792
Theoretical pI: Translated: 4.00; Mature: 4.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAHRKTPLTFFQQAIPEPFKNDSNADIGEVFIALIYPEILIRDATGDYIIDCRQDGFYA CCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCC EADDFPLLNFLEMFPTICDSLIAECTALKQRYERYLTDLQCL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDAHRKTPLTFFQQAIPEPFKNDSNADIGEVFIALIYPEILIRDATGDYIIDCRQDGFYA CCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCC EADDFPLLNFLEMFPTICDSLIAECTALKQRYERYLTDLQCL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA