Definition Ralstonia pickettii 12J chromosome chromosome 1, complete sequence.
Accession NC_010682
Length 3,942,557

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The map label for this gene is 187927553

Identifier: 187927553

GI number: 187927553

Start: 486839

End: 487147

Strand: Direct

Name: 187927553

Synonym: Rpic_0453

Alternate gene names: NA

Gene position: 486839-487147 (Clockwise)

Preceding gene: 187927552

Following gene: 187927559

Centisome position: 12.35

GC content: 53.72

Gene sequence:

>309_bases
ATGGATGCTCATCGCAAGACACCGCTGACCTTCTTCCAGCAAGCCATCCCGGAGCCATTCAAGAACGATAGCAACGCGGA
TATCGGTGAAGTCTTCATCGCGCTGATCTATCCCGAGATATTGATCCGCGATGCTACTGGCGATTACATCATCGATTGCC
GACAGGACGGGTTCTACGCCGAGGCGGATGACTTCCCGCTGCTGAATTTTCTCGAAATGTTCCCCACGATCTGCGATTCG
CTCATCGCAGAATGCACCGCGCTCAAGCAGCGCTACGAACGCTATCTCACCGATTTGCAGTGCTTGTGA

Upstream 100 bases:

>100_bases
AACGACGTATCCGAGTGTCCGGGTGTTTTACCCGGCTTTTCGTTGACGCGGAGAGACGTTCAATCCATTGTACTGTTCCA
TCGACTGGATCTGCGCATCA

Downstream 100 bases:

>100_bases
TGCTGTGCGCATCGAGCATGAGATGGCAAGCTCGGCTGCGCTGCAGCCTGTGCCAACTGATTCTCCGGGGTCATAGCTGA
GGCGTGCGAGTTTCGTTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MDAHRKTPLTFFQQAIPEPFKNDSNADIGEVFIALIYPEILIRDATGDYIIDCRQDGFYAEADDFPLLNFLEMFPTICDS
LIAECTALKQRYERYLTDLQCL

Sequences:

>Translated_102_residues
MDAHRKTPLTFFQQAIPEPFKNDSNADIGEVFIALIYPEILIRDATGDYIIDCRQDGFYAEADDFPLLNFLEMFPTICDS
LIAECTALKQRYERYLTDLQCL
>Mature_102_residues
MDAHRKTPLTFFQQAIPEPFKNDSNADIGEVFIALIYPEILIRDATGDYIIDCRQDGFYAEADDFPLLNFLEMFPTICDS
LIAECTALKQRYERYLTDLQCL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11792; Mature: 11792

Theoretical pI: Translated: 4.00; Mature: 4.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAHRKTPLTFFQQAIPEPFKNDSNADIGEVFIALIYPEILIRDATGDYIIDCRQDGFYA
CCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCC
EADDFPLLNFLEMFPTICDSLIAECTALKQRYERYLTDLQCL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDAHRKTPLTFFQQAIPEPFKNDSNADIGEVFIALIYPEILIRDATGDYIIDCRQDGFYA
CCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCC
EADDFPLLNFLEMFPTICDSLIAECTALKQRYERYLTDLQCL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA