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The map label for this gene is cppC [H]

Identifier: 187927552

GI number: 187927552

Start: 485364

End: 486737

Strand: Direct

Name: cppC [H]

Synonym: Rpic_0452

Alternate gene names: 187927552

Gene position: 485364-486737 (Clockwise)

Preceding gene: 187927551

Following gene: 187927553

Centisome position: 12.31

GC content: 58.08

Gene sequence:

>1374_bases
ATGATCGTGCGCATCTTCAACAGCGGAACCTCGGGTGGCGAGTCTCCTGTCCGCTATCTGTTGAGTGACACCGACCACGC
TGGGGAGAAGCGTTCCGTCGAGCCTGAAGTGCTGAGCGGCAGCCCCGATCTGACAATTGCCACGATCAACACCATCACGC
GCAAGCACAAGTACGTGTCTGGGGCCATCGCCTTCCGCGATCAAGAGCGGCCCAGCCGAGAGCAGATCATGGACATCATC
GGTCGCTTCAAGCAGACCGTGTGCCCTGGTCTTGATGCGCGCCACTACAACAGCCTGTTCGTTCTTCATCGAGACAAAGG
CAACACCGAGATCCACTTCGTGGTCCCCTCTCTCGAGTTGACCACGGGTCGCCGTCTATCGATCCACCCACCCGGTCCTC
GCAACATCGCACTCTACGATGCGTTCACCAAGGTCACGAATCACGAATTCGGTTACGACCAAGTCATTGTCGATCCATTG
AAGCTGGCGTTATCGGATTTTGAGCGCAAGGTGCCAGAGGGACAGCGAGACCGTAGCAACAAGCTGCATCTGCACAAGCA
TCTTGCCCGCTCCATTCGTCGCGGCGAAATTACGAACCGCGATCAGCTTTGCCAGCACCTCGAAGAGCAGTTCGGCGTGG
TCGTCACCCGCAAGGGGGCCGATTACATGTCGGTTAAGTTTCCTGGCAGCCAGCAGGCAAAGCGCATGCGTGGGCCGCTA
TATCGAGCCGATGCCGACTATGCGCAACTGCTGGAGCAATATCGCCGTCCGCCACCTGCCAAGCTGACAGCTGCCGAGTA
CCGACAGCACAAGAGCGTGCTCGCCAAGCTTGTTGCCGAACGGAAGCTTTTTTTCGCGGCAGCGTATCTGCAACCCAGGC
AACTGCGTGCCCACAAGGCCAGAGCAGCGTTGCGCCCAAGGCCAATGCGAGATCGCCGACCACCATCCCATAACCACAAG
GAGACTAAAACTATGCATCCTGAACTGAACGCTATCAAGCGCATCGCCTCCGATGCCTTATCCGTTGCCCGCCAGATCCG
TGCGGAGCGTCCTGTTTTCACGCCTGCCAATCGAGCTGTCGTTGCCAGTCGCATCCAGCGTCTACGCGATCAGGCATATC
AACCCAGGAAGACCGATCTCAGCGAACATGCGGCGATGGATACTGTCCACGAGGTCGAGAACGCATTGGGCGAGATTGAA
TCCGACCTTAGTGCCGCCACCGCCGACGTGAGTCATGCCAAGACACCCGAGCAACGCCGAAAGGCTGAAGAGCGTGTGGC
TAAGCTGATTGCCCAGAAGAACCGCTTGTTGCAGCAGCTTGCGCAAGCCAAGCTTCGTCAGATCAACGCCAGTGCGAAGC
GTTGGCGTACTTGA

Upstream 100 bases:

>100_bases
AGCCTGACGACGACATGCTCTATTACTTGCTCCAGGTCCACGAGATGGCCGAAGACATTTGGAAGGAGGCCAGGCAGAAC
AGCAAGCCTGCAGGTGACGC

Downstream 100 bases:

>100_bases
AAACGACGTATCCGAGTGTCCGGGTGTTTTACCCGGCTTTTCGTTGACGCGGAGAGACGTTCAATCCATTGTACTGTTCC
ATCGACTGGATCTGCGCATC

Product: Relaxase/mobilization nuclease family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 457; Mature: 457

Protein sequence:

>457_residues
MIVRIFNSGTSGGESPVRYLLSDTDHAGEKRSVEPEVLSGSPDLTIATINTITRKHKYVSGAIAFRDQERPSREQIMDII
GRFKQTVCPGLDARHYNSLFVLHRDKGNTEIHFVVPSLELTTGRRLSIHPPGPRNIALYDAFTKVTNHEFGYDQVIVDPL
KLALSDFERKVPEGQRDRSNKLHLHKHLARSIRRGEITNRDQLCQHLEEQFGVVVTRKGADYMSVKFPGSQQAKRMRGPL
YRADADYAQLLEQYRRPPPAKLTAAEYRQHKSVLAKLVAERKLFFAAAYLQPRQLRAHKARAALRPRPMRDRRPPSHNHK
ETKTMHPELNAIKRIASDALSVARQIRAERPVFTPANRAVVASRIQRLRDQAYQPRKTDLSEHAAMDTVHEVENALGEIE
SDLSAATADVSHAKTPEQRRKAEERVAKLIAQKNRLLQQLAQAKLRQINASAKRWRT

Sequences:

>Translated_457_residues
MIVRIFNSGTSGGESPVRYLLSDTDHAGEKRSVEPEVLSGSPDLTIATINTITRKHKYVSGAIAFRDQERPSREQIMDII
GRFKQTVCPGLDARHYNSLFVLHRDKGNTEIHFVVPSLELTTGRRLSIHPPGPRNIALYDAFTKVTNHEFGYDQVIVDPL
KLALSDFERKVPEGQRDRSNKLHLHKHLARSIRRGEITNRDQLCQHLEEQFGVVVTRKGADYMSVKFPGSQQAKRMRGPL
YRADADYAQLLEQYRRPPPAKLTAAEYRQHKSVLAKLVAERKLFFAAAYLQPRQLRAHKARAALRPRPMRDRRPPSHNHK
ETKTMHPELNAIKRIASDALSVARQIRAERPVFTPANRAVVASRIQRLRDQAYQPRKTDLSEHAAMDTVHEVENALGEIE
SDLSAATADVSHAKTPEQRRKAEERVAKLIAQKNRLLQQLAQAKLRQINASAKRWRT
>Mature_457_residues
MIVRIFNSGTSGGESPVRYLLSDTDHAGEKRSVEPEVLSGSPDLTIATINTITRKHKYVSGAIAFRDQERPSREQIMDII
GRFKQTVCPGLDARHYNSLFVLHRDKGNTEIHFVVPSLELTTGRRLSIHPPGPRNIALYDAFTKVTNHEFGYDQVIVDPL
KLALSDFERKVPEGQRDRSNKLHLHKHLARSIRRGEITNRDQLCQHLEEQFGVVVTRKGADYMSVKFPGSQQAKRMRGPL
YRADADYAQLLEQYRRPPPAKLTAAEYRQHKSVLAKLVAERKLFFAAAYLQPRQLRAHKARAALRPRPMRDRRPPSHNHK
ETKTMHPELNAIKRIASDALSVARQIRAERPVFTPANRAVVASRIQRLRDQAYQPRKTDLSEHAAMDTVHEVENALGEIE
SDLSAATADVSHAKTPEQRRKAEERVAKLIAQKNRLLQQLAQAKLRQINASAKRWRT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005094 [H]

Pfam domain/function: PF03432 Relaxase [H]

EC number: NA

Molecular weight: Translated: 52041; Mature: 52041

Theoretical pI: Translated: 10.84; Mature: 10.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVRIFNSGTSGGESPVRYLLSDTDHAGEKRSVEPEVLSGSPDLTIATINTITRKHKYVS
CEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHCCCCCCEEEEEHHHHHHHHHHHH
GAIAFRDQERPSREQIMDIIGRFKQTVCPGLDARHYNSLFVLHRDKGNTEIHFVVPSLEL
HHHEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEEEECCEEE
TTGRRLSIHPPGPRNIALYDAFTKVTNHEFGYDQVIVDPLKLALSDFERKVPEGQRDRSN
CCCCEEEECCCCCCCEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
KLHLHKHLARSIRRGEITNRDQLCQHLEEQFGVVVTRKGADYMSVKFPGSQQAKRMRGPL
CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEECCCCEEEEECCCHHHHHHHCCCC
YRADADYAQLLEQYRRPPPAKLTAAEYRQHKSVLAKLVAERKLFFAAAYLQPRQLRAHKA
CCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
RAALRPRPMRDRRPPSHNHKETKTMHPELNAIKRIASDALSVARQIRAERPVFTPANRAV
HHHCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
VASRIQRLRDQAYQPRKTDLSEHAAMDTVHEVENALGEIESDLSAATADVSHAKTPEQRR
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
KAEERVAKLIAQKNRLLQQLAQAKLRQINASAKRWRT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIVRIFNSGTSGGESPVRYLLSDTDHAGEKRSVEPEVLSGSPDLTIATINTITRKHKYVS
CEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHCCCCCCEEEEEHHHHHHHHHHHH
GAIAFRDQERPSREQIMDIIGRFKQTVCPGLDARHYNSLFVLHRDKGNTEIHFVVPSLEL
HHHEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEEEECCEEE
TTGRRLSIHPPGPRNIALYDAFTKVTNHEFGYDQVIVDPLKLALSDFERKVPEGQRDRSN
CCCCEEEECCCCCCCEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
KLHLHKHLARSIRRGEITNRDQLCQHLEEQFGVVVTRKGADYMSVKFPGSQQAKRMRGPL
CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEECCCCEEEEECCCHHHHHHHCCCC
YRADADYAQLLEQYRRPPPAKLTAAEYRQHKSVLAKLVAERKLFFAAAYLQPRQLRAHKA
CCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
RAALRPRPMRDRRPPSHNHKETKTMHPELNAIKRIASDALSVARQIRAERPVFTPANRAV
HHHCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
VASRIQRLRDQAYQPRKTDLSEHAAMDTVHEVENALGEIESDLSAATADVSHAKTPEQRR
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
KAEERVAKLIAQKNRLLQQLAQAKLRQINASAKRWRT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2991186 [H]