Click here to switch to the map view.

The map label for this gene is glnH [H]

Identifier: 187927127

GI number: 187927127

Start: 29130

End: 29957

Strand: Direct

Name: glnH [H]

Synonym: Rpic_0017

Alternate gene names: 187927127

Gene position: 29130-29957 (Clockwise)

Preceding gene: 187927126

Following gene: 187927128

Centisome position: 0.74

GC content: 64.86

Gene sequence:

>828_bases
ATGACCCGCATCACTGCCCGCCACGCTTCGCGCCCCACCTCGCGTCGCTTCTTCCTCCATGCCGTCATGGCGGCCAGCGC
TGTTGCGGCGTTGTTGCCCGGCCGCCCGGCCCATGCCGATGCGCTGGCCAACATCCAGAAAGCCGGCGTGATCCGCGTGG
CCATCCCGAACGATTTCCCGCCGTTCGGCTCGCTGGGGCCAGACCTCAAGCTGCAGGGCTATGACATCGACATGGCCGGC
CTTATCGCCAAGGAGCTCGGCGTCAAGGCAGAGCTGGTGCCCGTCACCAGCACCAACCGCATTCCGTTCCTCACCACGGG
CAAGGTGGATGTCGTCATCTCCAGCCTCGGTAAGAACGCCGAGCGCGCCAAGGTGATCGACTTCACGCAGGCGTATGCGC
CGTTCCCCAAGAGCGTGTACGGCCCGAAGGATGTGTCGATCAAGGGGCCGGCAGATCTGGCTGGCAAGACGATCGGCGTC
ACGCGCGGCTCGACTGAAGATCTGGCGCTCTCGGCCGTGGCGCCGGCGTCGGCCACCATCAAGCGCTATGAAGACAACAA
CGCCACCGCGCAGAGCTACCTGATCGGCCAGGTGCAACTGGTGACGGTGGGCAACATCGTCGCCAACGCGGTGAACGAGC
GCACGAAGCTGCGCCAGCTCGACCTGAAGTTCCCCGTGGAAGACACGCCTTGCTATGTGGGTGTGGCCAAGGGCGAGCCC
GCGCTGCTCGACAAGGTGAACACCGTCATCACCAAGCTGAAGACGGATGGCCGCCTGAACGATCTGTCGCAGCGCTGGAT
CAAGATGCCGCTGCCCGCAAAGCTGTAG

Upstream 100 bases:

>100_bases
GACTGCGCCGCCCGCCACGCCCGAACCCATGCAGCACGAACCGGCTTCCTTTCGCCTCGCCTCGATTTCCTGATCCTGAA
TTTCCTGAAGGAGTTTTTGA

Downstream 100 bases:

>100_bases
AACCTGCTCACGATCCTACTGCGCGACCCGATCTTGACACTGCGATGCTCGCCGTACCCACGTACGGCTGCGCTTCTCGC
GCCAACCTCGGGCCGCTCGC

Product: family 3 extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 274

Protein sequence:

>275_residues
MTRITARHASRPTSRRFFLHAVMAASAVAALLPGRPAHADALANIQKAGVIRVAIPNDFPPFGSLGPDLKLQGYDIDMAG
LIAKELGVKAELVPVTSTNRIPFLTTGKVDVVISSLGKNAERAKVIDFTQAYAPFPKSVYGPKDVSIKGPADLAGKTIGV
TRGSTEDLALSAVAPASATIKRYEDNNATAQSYLIGQVQLVTVGNIVANAVNERTKLRQLDLKFPVEDTPCYVGVAKGEP
ALLDKVNTVITKLKTDGRLNDLSQRWIKMPLPAKL

Sequences:

>Translated_275_residues
MTRITARHASRPTSRRFFLHAVMAASAVAALLPGRPAHADALANIQKAGVIRVAIPNDFPPFGSLGPDLKLQGYDIDMAG
LIAKELGVKAELVPVTSTNRIPFLTTGKVDVVISSLGKNAERAKVIDFTQAYAPFPKSVYGPKDVSIKGPADLAGKTIGV
TRGSTEDLALSAVAPASATIKRYEDNNATAQSYLIGQVQLVTVGNIVANAVNERTKLRQLDLKFPVEDTPCYVGVAKGEP
ALLDKVNTVITKLKTDGRLNDLSQRWIKMPLPAKL
>Mature_274_residues
TRITARHASRPTSRRFFLHAVMAASAVAALLPGRPAHADALANIQKAGVIRVAIPNDFPPFGSLGPDLKLQGYDIDMAGL
IAKELGVKAELVPVTSTNRIPFLTTGKVDVVISSLGKNAERAKVIDFTQAYAPFPKSVYGPKDVSIKGPADLAGKTIGVT
RGSTEDLALSAVAPASATIKRYEDNNATAQSYLIGQVQLVTVGNIVANAVNERTKLRQLDLKFPVEDTPCYVGVAKGEPA
LLDKVNTVITKLKTDGRLNDLSQRWIKMPLPAKL

Specific function: Part of the ABC transporter complex glnHMPQ involved in glutamine transport [H]

COG id: COG0834

COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

Organism=Escherichia coli, GI1788228, Length=265, Percent_Identity=28.6792452830189, Blast_Score=98, Evalue=5e-22,
Organism=Escherichia coli, GI1787085, Length=224, Percent_Identity=29.0178571428571, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1787031, Length=233, Percent_Identity=28.755364806867, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1787088, Length=251, Percent_Identity=25.0996015936255, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1786876, Length=249, Percent_Identity=24.8995983935743, Blast_Score=61, Evalue=9e-11,

Paralogues:

None

Copy number: 1920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1060 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015683
- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 29362; Mature: 29231

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: PS01039 SBP_BACTERIAL_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRITARHASRPTSRRFFLHAVMAASAVAALLPGRPAHADALANIQKAGVIRVAIPNDFP
CCEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCEEEEEECCCCC
PFGSLGPDLKLQGYDIDMAGLIAKELGVKAELVPVTSTNRIPFLTTGKVDVVISSLGKNA
CCCCCCCCCEEECCCCCHHHHHHHHHCCEEEEEEECCCCCCCEEECCHHHHHHHHHCCCC
ERAKVIDFTQAYAPFPKSVYGPKDVSIKGPADLAGKTIGVTRGSTEDLALSAVAPASATI
CHHEEEEHHHHHCCCCCCCCCCCCCEECCCHHHCCCEEEECCCCCCCEEEEEECCCCCEE
KRYEDNNATAQSYLIGQVQLVTVGNIVANAVNERTKLRQLDLKFPVEDTPCYVGVAKGEP
EEECCCCCCCCEEEEEEEEEEEHHHHHHHHHHHHHHHHEECEECCCCCCCEEEEECCCCC
ALLDKVNTVITKLKTDGRLNDLSQRWIKMPLPAKL
HHHHHHHHHHHHHCCCCCHHHHHHHHEECCCCCCC
>Mature Secondary Structure 
TRITARHASRPTSRRFFLHAVMAASAVAALLPGRPAHADALANIQKAGVIRVAIPNDFP
CEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCEEEEEECCCCC
PFGSLGPDLKLQGYDIDMAGLIAKELGVKAELVPVTSTNRIPFLTTGKVDVVISSLGKNA
CCCCCCCCCEEECCCCCHHHHHHHHHCCEEEEEEECCCCCCCEEECCHHHHHHHHHCCCC
ERAKVIDFTQAYAPFPKSVYGPKDVSIKGPADLAGKTIGVTRGSTEDLALSAVAPASATI
CHHEEEEHHHHHCCCCCCCCCCCCCEECCCHHHCCCEEEECCCCCCCEEEEEECCCCCEE
KRYEDNNATAQSYLIGQVQLVTVGNIVANAVNERTKLRQLDLKFPVEDTPCYVGVAKGEP
EEECCCCCCCCEEEEEEEEEEEHHHHHHHHHHHHHHHHEECEECCCCCCCEEEEECCCCC
ALLDKVNTVITKLKTDGRLNDLSQRWIKMPLPAKL
HHHHHHHHHHHHHCCCCCHHHHHHHHEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7551042; 9384377 [H]