| Definition | Borrelia hermsii DAH chromosome, complete genome. |
|---|---|
| Accession | NC_010673 |
| Length | 922,307 |
Click here to switch to the map view.
The map label for this gene is 187918673
Identifier: 187918673
GI number: 187918673
Start: 880111
End: 880308
Strand: Direct
Name: 187918673
Synonym: BH0820
Alternate gene names: NA
Gene position: 880111-880308 (Clockwise)
Preceding gene: 187918672
Following gene: 187918674
Centisome position: 95.42
GC content: 28.79
Gene sequence:
>198_bases ATGAGAATACCTTTAAAAGAGATACAAGATTTTGATGGCAATTATTATGAACTTGTTATGGCAGTGATAATTCGTACAGA TCAAATTATTGATCAAATTTCTTTAGCAGAGCATACTATTTCTGATGAGAGAGTAGTAAGCCAAGCTTTTAATGATATTT TAACAGATCGATTTACGTATTCAATTGAAGAGAAATAA
Upstream 100 bases:
>100_bases GACCGATAGATCTGCAAATAAAGTTTTTGAATTGATAAAGGATGAGATAGAAAAGAGGAAATTATATATTAAGTAAATAA GTTAAGGAGGTTTAAAAGGA
Downstream 100 bases:
>100_bases AATAGTTTTTATATTTGGTCCTACGGCTGTAGGTAAGAGTGAGCTTTTACTCAATTTTCCAAAAGGTGTAGCTGAAATAA TTAATGTCGATTCTGTTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 65; Mature: 65
Protein sequence:
>65_residues MRIPLKEIQDFDGNYYELVMAVIIRTDQIIDQISLAEHTISDERVVSQAFNDILTDRFTYSIEEK
Sequences:
>Translated_65_residues MRIPLKEIQDFDGNYYELVMAVIIRTDQIIDQISLAEHTISDERVVSQAFNDILTDRFTYSIEEK >Mature_65_residues MRIPLKEIQDFDGNYYELVMAVIIRTDQIIDQISLAEHTISDERVVSQAFNDILTDRFTYSIEEK
Specific function: Unknown
COG id: COG1758
COG function: function code K; DNA-directed RNA polymerase, subunit K/omega
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7652; Mature: 7652
Theoretical pI: Translated: 4.09; Mature: 4.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIPLKEIQDFDGNYYELVMAVIIRTDQIIDQISLAEHTISDERVVSQAFNDILTDRFTY CCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHE SIEEK ECCCC >Mature Secondary Structure MRIPLKEIQDFDGNYYELVMAVIIRTDQIIDQISLAEHTISDERVVSQAFNDILTDRFTY CCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHE SIEEK ECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA