Click here to switch to the map view.

The map label for this gene is rimP

Identifier: 187918653

GI number: 187918653

Start: 856165

End: 856596

Strand: Direct

Name: rimP

Synonym: BH0799

Alternate gene names: 187918653

Gene position: 856165-856596 (Clockwise)

Preceding gene: 187918652

Following gene: 187918654

Centisome position: 92.83

GC content: 28.24

Gene sequence:

>432_bases
TTGGTTAAAATTGTTGATAATAGTGAAGTTTACAATTTAATAAAGAATGTAACAGATCGATTGGGAATTGAAATTATAGA
AATTAACACTTTCAGAAAAAGAGGTGAGGGTAGGGTTCAAATAGTTCTTTATAAGGGTGATGACTTCGGAGTTGATACGC
TTTGTGATTTACATAAAATGATTTTACTTAACTTGGAGGCAGTTCTTAAATATAATTTTAGCTTAGAAATCTCTACGCCT
GGGATAAATAGGAAAATTAAAAGTGATAGAGAATTTAAAATTTTTGAGGGTAAGAAGATTAAGTTAATGCTAGATAATGA
TTTTGAAGAAGGTTTTATTTTAAAAGCAGGAGCAGATAGTTTTATTTTTAAAACAGATAATAAAGAGGTAAAAGTTCTTT
ATAGTGATGTCAAGAAGGCTAAATTATCGTGA

Upstream 100 bases:

>100_bases
TCTTGACATTTATTTTCATTAATGTTACTCTTAATTTGGATTGGTTATTTTATTTAATAAGGTTCTTTTCAAAAGAGCCT
TATTATTTTTAGGAATATGA

Downstream 100 bases:

>100_bases
AGGAGTCTTGGATATGATAAAGGGTACTGGTCAAATGATTTCCAATATTGCTAGTGAGCGAGGAATGAGCATAGATGCTA
TTCGAAAGACGGTTAGGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MVKIVDNSEVYNLIKNVTDRLGIEIIEINTFRKRGEGRVQIVLYKGDDFGVDTLCDLHKMILLNLEAVLKYNFSLEISTP
GINRKIKSDREFKIFEGKKIKLMLDNDFEEGFILKAGADSFIFKTDNKEVKVLYSDVKKAKLS

Sequences:

>Translated_143_residues
MVKIVDNSEVYNLIKNVTDRLGIEIIEINTFRKRGEGRVQIVLYKGDDFGVDTLCDLHKMILLNLEAVLKYNFSLEISTP
GINRKIKSDREFKIFEGKKIKLMLDNDFEEGFILKAGADSFIFKTDNKEVKVLYSDVKKAKLS
>Mature_143_residues
MVKIVDNSEVYNLIKNVTDRLGIEIIEINTFRKRGEGRVQIVLYKGDDFGVDTLCDLHKMILLNLEAVLKYNFSLEISTP
GINRKIKSDREFKIFEGKKIKLMLDNDFEEGFILKAGADSFIFKTDNKEVKVLYSDVKKAKLS

Specific function: Required for maturation of 30S ribosomal subunits

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RIMP_BORHD (B2S1E3)

Other databases:

- EMBL:   CP000048
- RefSeq:   YP_001884219.1
- EnsemblBacteria:   EBBORT00000006504
- GeneID:   6276569
- GenomeReviews:   CP000048_GR
- KEGG:   bhr:BH0799
- GeneTree:   EBGT00050000007582
- HOGENOM:   HBG353177
- OMA:   IKSDREF
- ProtClustDB:   PRK14630
- BioCyc:   BHER314723:BH0799-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01077
- InterPro:   IPR003728

Pfam domain/function: PF02576 DUF150

EC number: NA

Molecular weight: Translated: 16453; Mature: 16453

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKIVDNSEVYNLIKNVTDRLGIEIIEINTFRKRGEGRVQIVLYKGDDFGVDTLCDLHKM
CEEEECCHHHHHHHHHHHHHHCEEEEEEECCCCCCCCEEEEEEECCCCCCHHHHHHHHHH
ILLNLEAVLKYNFSLEISTPGINRKIKSDREFKIFEGKKIKLMLDNDFEEGFILKAGADS
HHHHHHHHEEEEEEEEEECCCCCCCCCCCCCEEEECCCEEEEEEECCCCCCEEEEECCCE
FIFKTDNKEVKVLYSDVKKAKLS
EEEEECCCEEEEEEEHHHHHCCC
>Mature Secondary Structure
MVKIVDNSEVYNLIKNVTDRLGIEIIEINTFRKRGEGRVQIVLYKGDDFGVDTLCDLHKM
CEEEECCHHHHHHHHHHHHHHCEEEEEEECCCCCCCCEEEEEEECCCCCCHHHHHHHHHH
ILLNLEAVLKYNFSLEISTPGINRKIKSDREFKIFEGKKIKLMLDNDFEEGFILKAGADS
HHHHHHHHEEEEEEEEEECCCCCCCCCCCCCEEEECCCEEEEEEECCCCCCEEEEECCCE
FIFKTDNKEVKVLYSDVKKAKLS
EEEEECCCEEEEEEEHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA