Definition Borrelia hermsii DAH chromosome, complete genome.
Accession NC_010673
Length 922,307

Click here to switch to the map view.

The map label for this gene is 187918652

Identifier: 187918652

GI number: 187918652

Start: 855441

End: 856052

Strand: Direct

Name: 187918652

Synonym: BH0798

Alternate gene names: NA

Gene position: 855441-856052 (Clockwise)

Preceding gene: 187918651

Following gene: 187918653

Centisome position: 92.75

GC content: 31.7

Gene sequence:

>612_bases
ATGTGGATGTGGAATTGGGTCGTATTAAAAAACATATTTCTTCCCCTTTGTTCTTGTTGTCATAAGAATTATGTTTACTT
GAATGCTCTTTGTAAGGATTGTATTGAATTCTTTCATTTTGATGTTAAGTCAAGAGATGATTTTTGGTATTTTTTTGAAT
ATAAAAGTGAGTATAAGAACTTGCTTCTTGCTTACAAGAGAGATGGACAAAGATTACTTGGTCAGTTTTTTGCAAATGGG
ATTTTGCAATTTCTGATGAGCATTGATTTTGACCTGGTTGTTAGTGTTCCTTGTAGCTTTAAAAGAAAGATTTTTTACGG
CTTTGATCACATGGAATATATTGGAGATTTGTTAGGTAATAGTGGGATAAAGTATGTTAATGTTTTTAAACGAGGATTAG
GCAAGAGTCAAAAGCTATTGCGCGGAGATTTAAGGCATAGTAATTTAGAGAATAAAGTTAAATTAAAATTGAAGTATAGA
AATATTGAGTTTAAAAGGGTTGTACTTATTGATGACATTGTAACAACAGGCTCATCTATGACTTTTTGTAGAGATGTTCT
TATAAAACATGGTGCTTGGAGTGTGATAAAGCTATCACTTGCGAGGGTTTAG

Upstream 100 bases:

>100_bases
AGCTTAAAAATTTGATTTCTAAAATAGATATCAATAATATTACTCCTTTTCAAGCGATGAATTTACTAAGTGAAATAATT
TTAAAGACTAAGATGTAAGC

Downstream 100 bases:

>100_bases
TGATTATTGGTGTCTTGACATTTATTTTCATTAATGTTACTCTTAATTTGGATTGGTTATTTTATTTAATAAGGTTCTTT
TCAAAAGAGCCTTATTATTT

Product: amidophosphoribosyltransferase family protein

Products: NA

Alternate protein names: Phosphoribosyltransferase; Amidophosphoribosyltransferase Family Protein; ComFC Protein; Competence Protein ComFC

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MWMWNWVVLKNIFLPLCSCCHKNYVYLNALCKDCIEFFHFDVKSRDDFWYFFEYKSEYKNLLLAYKRDGQRLLGQFFANG
ILQFLMSIDFDLVVSVPCSFKRKIFYGFDHMEYIGDLLGNSGIKYVNVFKRGLGKSQKLLRGDLRHSNLENKVKLKLKYR
NIEFKRVVLIDDIVTTGSSMTFCRDVLIKHGAWSVIKLSLARV

Sequences:

>Translated_203_residues
MWMWNWVVLKNIFLPLCSCCHKNYVYLNALCKDCIEFFHFDVKSRDDFWYFFEYKSEYKNLLLAYKRDGQRLLGQFFANG
ILQFLMSIDFDLVVSVPCSFKRKIFYGFDHMEYIGDLLGNSGIKYVNVFKRGLGKSQKLLRGDLRHSNLENKVKLKLKYR
NIEFKRVVLIDDIVTTGSSMTFCRDVLIKHGAWSVIKLSLARV
>Mature_203_residues
MWMWNWVVLKNIFLPLCSCCHKNYVYLNALCKDCIEFFHFDVKSRDDFWYFFEYKSEYKNLLLAYKRDGQRLLGQFFANG
ILQFLMSIDFDLVVSVPCSFKRKIFYGFDHMEYIGDLLGNSGIKYVNVFKRGLGKSQKLLRGDLRHSNLENKVKLKLKYR
NIEFKRVVLIDDIVTTGSSMTFCRDVLIKHGAWSVIKLSLARV

Specific function: Unknown

COG id: COG1040

COG function: function code R; Predicted amidophosphoribosyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24023; Mature: 24023

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: PS00103 PUR_PYR_PR_TRANSFER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWMWNWVVLKNIFLPLCSCCHKNYVYLNALCKDCIEFFHFDVKSRDDFWYFFEYKSEYKN
CCEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHHHH
LLLAYKRDGQRLLGQFFANGILQFLMSIDFDLVVSVPCSFKRKIFYGFDHMEYIGDLLGN
HHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHEEECCHHHHHHHHHHCC
SGIKYVNVFKRGLGKSQKLLRGDLRHSNLENKVKLKLKYRNIEFKRVVLIDDIVTTGSSM
CCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCEEEEEEEEHHHHCCCCH
TFCRDVLIKHGAWSVIKLSLARV
HHHHHHHHHCCCHHHHHHHHHCC
>Mature Secondary Structure
MWMWNWVVLKNIFLPLCSCCHKNYVYLNALCKDCIEFFHFDVKSRDDFWYFFEYKSEYKN
CCEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHHHH
LLLAYKRDGQRLLGQFFANGILQFLMSIDFDLVVSVPCSFKRKIFYGFDHMEYIGDLLGN
HHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHEEECCHHHHHHHHHHCC
SGIKYVNVFKRGLGKSQKLLRGDLRHSNLENKVKLKLKYRNIEFKRVVLIDDIVTTGSSM
CCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCEEEEEEEEHHHHCCCCH
TFCRDVLIKHGAWSVIKLSLARV
HHHHHHHHHCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA