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The map label for this gene is omp85 [H]

Identifier: 187918648

GI number: 187918648

Start: 849237

End: 851696

Strand: Direct

Name: omp85 [H]

Synonym: BH0795

Alternate gene names: 187918648

Gene position: 849237-851696 (Clockwise)

Preceding gene: 187918647

Following gene: 187918649

Centisome position: 92.08

GC content: 29.96

Gene sequence:

>2460_bases
GTGCAGCTATTTAAAATCTTTATTTTTGTGGTTTTCATCTTGTTTGTATTTAATTTAGGATATTCTCAAGAGAATTATAA
GGACAAGATGATAAAAAGTATTGACTTTAATGGGCTTAAGAATATAAAAGAAAATGACCTTAAATTTATTTTGAATGTTT
ATTTGGGACAAACTTATTCCGATGAACTTTTTGATAGGTTGCAAGTTGACCTTTATGCTCTTGATTATTTTGAGGGACTT
ATTCGACCTGAGTTTAGAATAGAAGATGATAAACTTGTAATTACATTTTTTGTGAAGGAAAAGTCTTTAGTAAAAACTGT
TACTTTTATTGATGATAGTGGGATTTTTTGGAATAGTGAACTGCGTGACAAATCAGATGTTAAGGTAAAAGAGGCTTTAA
ATCTTTCAAGAATTAAAAAAAGTGTTGTTAAATTTGAAGAAATGTACAAAGATGCCGGGTATCTTGATGTTACTGTTGAA
TTTGATATTAAAGAGGAAAATAGCTTAGTAGATATTGTGTTTAAAATTAATGCTGGTCCTAAGTATGTTGTTAAAGAGGT
TTCTTTTGAGGGAAATTTGAATTTTAAGAGCCGTATTCTTAGAAAATATTTAGTGTCAAAACCCTCATCTTTATTTGCTG
ATGGCAAGTATTTAAAGTCAAATGTTGATAAAGATAAAATGCGACTTGAGTCTTATTATAAAAATAATGGATATATTAAT
GCCAAGGTTGTAAATAATACTGTAGATATACGAATTCCTAGTGATTCTAAAAAAATGGAGAGAGAGGTTTACTTAAAATA
TTTTATTTCAGAGGGTAATATTTTTAAATTTGGTAAGTTTGAAATTACTGGTAATTTGGTTTTTAAATTAGAAGAATTGC
AATCCCTAATTACTTTTAGGGAAGGAGATATTTTTGATGATTCAAGATTTGAGCAAGATTTTGCAAAAATTAGGGATAAG
TATTATTCCGATGGTTATATCTTTACAGAGATTGTGCCTTCTCGAACGATAAGAGATGAATTTGTAGATTATTCTATTAA
TATTTTAGAAAAAGAGAAAGCTCATATTGAGTCTATTACTGTCTCAGGTAATAAGAAAACAGCTTCCCATGTAATACTTA
GAGAAATTCCACTAATGGAGGGAGATGTTTTTAGTTTGGAAAAACTTCGGATGGGAATGCTTAATTTGCAAAGACTTGGT
TATTTTGGAAATGTTATACCCGATGTTGTTCCAAGTAGTATTGAGGGTTTAATGAAAATAAATTTTGTTGTCGAAGAGCG
GGAGACAGCAAGCTTGAGATTTGGTATGAATTTTGGTGGGGTTAGTAATTCTTGGCTTCCATTTTCAGTTTTTGGACAGT
GGGAACAATCTAATTTTCTAGGTGAAGGGTATGCTCTTTCTGCAAGACTTAATCTTGCTTTCTCAGAGCAAAGCTTTAGG
TTGATGTTTGAAGATAATTGGTTTATGCAGACTAGATGGACTCTTGGGGGATTTATTGATTTCTCACATTCTATAAATAC
AGCTTATCAGGATATTAATGGGCCTATATTTATAGGCAAAAAGGAAGTTCCAGATCCTTTTGTAAGTTGGGAAGCATATA
ATAATGATAAAAATTTTTCGGATTTTAATATTATGAATTATTCTTTAGCTAAATTTAGTATTAGTGGGTTTACTGGCTAT
ACTTTTTCTAATTATCTTGGAAAGCAGTCATTTGTTGGAACTGTTCAAACTGCTTTGAAATATGTGTATTATGATAATAA
TGTTAATAGACCTTCAAATTACTATTTGAGGGATAATTATAATACTATTAGATTTGAAAATTCTTTTGGTATTAGTGTTG
CGTGGGATACAAGAAATTCCCAGTCTTTATCTAATAATGGTTTTTTGCTTAAGCAACAATTTGATTTTTTTGGGGGGTTT
TTACTTGGACAGAGTCATTTTTCAAAATCCACAACGACTTTTGAGAGATATTTTTCTCTTTTAGGGTATCAGGATGTTTT
TACTCCATATTTTGATTTAATTTTAACTTTAAGAAGTGTTTATTCAAATGTTTTGCCGCCACTTGGAAATGGTTTTGAAA
TAGAAGTACAGCCACATCATCTTATAGTTATTAGTGAAAACTTTATGATTGCAAGAGGATGGGGCACTTTGAGCAATATT
TATAGTTCGTTTGTAAATACTCTTCAGATATCAATGCCTTTGATTAAGAATATTTTGGTTTGGGATATTTTATTTTTAGA
TATGGCTTCATATTCTCTAGAAGGGCAAGAGAATTCTTTATTTGTTCCTTTTAGTAATTTTATTTTTAGTTGGGGCTTTG
GAATTAGAAGTGTTCTGCCTCAAATGCCTTTGTCTTTTGTAATAGCTTATCCATTTTATTTCAGTAATGAAGGCGTTAAT
AGATATTATAATTATTCTGGAGGGTTTAAATTTTTCTTAGCCATTGATATGAGATACTGA

Upstream 100 bases:

>100_bases
ATATTTTTGATTATAATTTTATGAAATATGGTCATGGCATAGGAAATCAAATATCTATTTTTTGGAAATTTAAATACTGA
AGCTATGTAAGGGGTTTAGG

Downstream 100 bases:

>100_bases
TATAATTTAGTTAGCTTTTCATAAGGAGGGTTGTTATGGTTTCCATGATGCTTTTATTTGCATGTTTTTTTCCATTAAAT
CTTTTTTCAGTTAATGTTAC

Product: outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 819; Mature: 819

Protein sequence:

>819_residues
MQLFKIFIFVVFILFVFNLGYSQENYKDKMIKSIDFNGLKNIKENDLKFILNVYLGQTYSDELFDRLQVDLYALDYFEGL
IRPEFRIEDDKLVITFFVKEKSLVKTVTFIDDSGIFWNSELRDKSDVKVKEALNLSRIKKSVVKFEEMYKDAGYLDVTVE
FDIKEENSLVDIVFKINAGPKYVVKEVSFEGNLNFKSRILRKYLVSKPSSLFADGKYLKSNVDKDKMRLESYYKNNGYIN
AKVVNNTVDIRIPSDSKKMEREVYLKYFISEGNIFKFGKFEITGNLVFKLEELQSLITFREGDIFDDSRFEQDFAKIRDK
YYSDGYIFTEIVPSRTIRDEFVDYSINILEKEKAHIESITVSGNKKTASHVILREIPLMEGDVFSLEKLRMGMLNLQRLG
YFGNVIPDVVPSSIEGLMKINFVVEERETASLRFGMNFGGVSNSWLPFSVFGQWEQSNFLGEGYALSARLNLAFSEQSFR
LMFEDNWFMQTRWTLGGFIDFSHSINTAYQDINGPIFIGKKEVPDPFVSWEAYNNDKNFSDFNIMNYSLAKFSISGFTGY
TFSNYLGKQSFVGTVQTALKYVYYDNNVNRPSNYYLRDNYNTIRFENSFGISVAWDTRNSQSLSNNGFLLKQQFDFFGGF
LLGQSHFSKSTTTFERYFSLLGYQDVFTPYFDLILTLRSVYSNVLPPLGNGFEIEVQPHHLIVISENFMIARGWGTLSNI
YSSFVNTLQISMPLIKNILVWDILFLDMASYSLEGQENSLFVPFSNFIFSWGFGIRSVLPQMPLSFVIAYPFYFSNEGVN
RYYNYSGGFKFFLAIDMRY

Sequences:

>Translated_819_residues
MQLFKIFIFVVFILFVFNLGYSQENYKDKMIKSIDFNGLKNIKENDLKFILNVYLGQTYSDELFDRLQVDLYALDYFEGL
IRPEFRIEDDKLVITFFVKEKSLVKTVTFIDDSGIFWNSELRDKSDVKVKEALNLSRIKKSVVKFEEMYKDAGYLDVTVE
FDIKEENSLVDIVFKINAGPKYVVKEVSFEGNLNFKSRILRKYLVSKPSSLFADGKYLKSNVDKDKMRLESYYKNNGYIN
AKVVNNTVDIRIPSDSKKMEREVYLKYFISEGNIFKFGKFEITGNLVFKLEELQSLITFREGDIFDDSRFEQDFAKIRDK
YYSDGYIFTEIVPSRTIRDEFVDYSINILEKEKAHIESITVSGNKKTASHVILREIPLMEGDVFSLEKLRMGMLNLQRLG
YFGNVIPDVVPSSIEGLMKINFVVEERETASLRFGMNFGGVSNSWLPFSVFGQWEQSNFLGEGYALSARLNLAFSEQSFR
LMFEDNWFMQTRWTLGGFIDFSHSINTAYQDINGPIFIGKKEVPDPFVSWEAYNNDKNFSDFNIMNYSLAKFSISGFTGY
TFSNYLGKQSFVGTVQTALKYVYYDNNVNRPSNYYLRDNYNTIRFENSFGISVAWDTRNSQSLSNNGFLLKQQFDFFGGF
LLGQSHFSKSTTTFERYFSLLGYQDVFTPYFDLILTLRSVYSNVLPPLGNGFEIEVQPHHLIVISENFMIARGWGTLSNI
YSSFVNTLQISMPLIKNILVWDILFLDMASYSLEGQENSLFVPFSNFIFSWGFGIRSVLPQMPLSFVIAYPFYFSNEGVN
RYYNYSGGFKFFLAIDMRY
>Mature_819_residues
MQLFKIFIFVVFILFVFNLGYSQENYKDKMIKSIDFNGLKNIKENDLKFILNVYLGQTYSDELFDRLQVDLYALDYFEGL
IRPEFRIEDDKLVITFFVKEKSLVKTVTFIDDSGIFWNSELRDKSDVKVKEALNLSRIKKSVVKFEEMYKDAGYLDVTVE
FDIKEENSLVDIVFKINAGPKYVVKEVSFEGNLNFKSRILRKYLVSKPSSLFADGKYLKSNVDKDKMRLESYYKNNGYIN
AKVVNNTVDIRIPSDSKKMEREVYLKYFISEGNIFKFGKFEITGNLVFKLEELQSLITFREGDIFDDSRFEQDFAKIRDK
YYSDGYIFTEIVPSRTIRDEFVDYSINILEKEKAHIESITVSGNKKTASHVILREIPLMEGDVFSLEKLRMGMLNLQRLG
YFGNVIPDVVPSSIEGLMKINFVVEERETASLRFGMNFGGVSNSWLPFSVFGQWEQSNFLGEGYALSARLNLAFSEQSFR
LMFEDNWFMQTRWTLGGFIDFSHSINTAYQDINGPIFIGKKEVPDPFVSWEAYNNDKNFSDFNIMNYSLAKFSISGFTGY
TFSNYLGKQSFVGTVQTALKYVYYDNNVNRPSNYYLRDNYNTIRFENSFGISVAWDTRNSQSLSNNGFLLKQQFDFFGGF
LLGQSHFSKSTTTFERYFSLLGYQDVFTPYFDLILTLRSVYSNVLPPLGNGFEIEVQPHHLIVISENFMIARGWGTLSNI
YSSFVNTLQISMPLIKNILVWDILFLDMASYSLEGQENSLFVPFSNFIFSWGFGIRSVLPQMPLSFVIAYPFYFSNEGVN
RYYNYSGGFKFFLAIDMRY

Specific function: Unknown

COG id: COG4775

COG function: function code M; Outer membrane protein/protective antigen OMA87

Gene ontology:

Cell location: Cell outer membrane (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the surface antigen D15 family [H]

Homologues:

Organism=Escherichia coli, GI1786374, Length=477, Percent_Identity=24.7379454926625, Blast_Score=122, Evalue=6e-29,

Paralogues:

None

Copy number: 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 220 Molecules/Cell In: Stationary Phase, Ri

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184
- InterPro:   IPR016474
- InterPro:   IPR010827 [H]

Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]

EC number: NA

Molecular weight: Translated: 95233; Mature: 95233

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLFKIFIFVVFILFVFNLGYSQENYKDKMIKSIDFNGLKNIKENDLKFILNVYLGQTYS
CHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHEEEEHHHCCCCC
DELFDRLQVDLYALDYFEGLIRPEFRIEDDKLVITFFVKEKSLVKTVTFIDDSGIFWNSE
HHHHHHHHHHHEEEHHHHHHCCCCEEECCCCEEEEEEECCCCEEEEEEEEECCCCEECCC
LRDKSDVKVKEALNLSRIKKSVVKFEEMYKDAGYLDVTVEFDIKEENSLVDIVFKINAGP
CCCCCCCHHHHHHCHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCEEEEEEEECCCC
KYVVKEVSFEGNLNFKSRILRKYLVSKPSSLFADGKYLKSNVDKDKMRLESYYKNNGYIN
CEEEEEEECCCCCCHHHHHHHHHHHCCCHHHHCCCHHHHCCCCHHHHHHHHHHCCCCEEE
AKVVNNTVDIRIPSDSKKMEREVYLKYFISEGNIFKFGKFEITGNLVFKLEELQSLITFR
EEEECCEEEEEECCCCHHHHHHEEEEEEECCCCEEEEEEEEEECEEEEEHHHHHHHHHHC
EGDIFDDSRFEQDFAKIRDKYYSDGYIFTEIVPSRTIRDEFVDYSINILEKEKAHIESIT
CCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHCCEEEEEECCCCEEEEEE
VSGNKKTASHVILREIPLMEGDVFSLEKLRMGMLNLQRLGYFGNVIPDVVPSSIEGLMKI
ECCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCHHCCHHHHHCCHHHHCEEEE
NFVVEERETASLRFGMNFGGVSNSWLPFSVFGQWEQSNFLGEGYALSARLNLAFSEQSFR
EEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEEEEEECCCCEE
LMFEDNWFMQTRWTLGGFIDFSHSINTAYQDINGPIFIGKKEVPDPFVSWEAYNNDKNFS
EEEECCEEEEEEECCCEEEEECCCCHHHHHHCCCCEEECCCCCCCCCEEEEEECCCCCCC
DFNIMNYSLAKFSISGFTGYTFSNYLGKQSFVGTVQTALKYVYYDNNVNRPSNYYLRDNY
CEEEEEEEEEEEEECCCCCCHHHHHCCCHHHHHHHHHHEEEEEECCCCCCCCCEEEECCC
NTIRFENSFGISVAWDTRNSQSLSNNGFLLKQQFDFFGGFLLGQSHFSKSTTTFERYFSL
CEEEEECCCCEEEEECCCCCCCCCCCCEEEEEEHHHHHHEEECCHHCCCCHHHHHHHHHH
LGYQDVFTPYFDLILTLRSVYSNVLPPLGNGFEIEVQPHHLIVISENFMIARGWGTLSNI
HCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEEECCEEEEECCCHHHHH
YSSFVNTLQISMPLIKNILVWDILFLDMASYSLEGQENSLFVPFSNFIFSWGFGIRSVLP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHCCCHHHHHH
QMPLSFVIAYPFYFSNEGVNRYYNYSGGFKFFLAIDMRY
HCCCEEEEEECEEECCCCCCEEEECCCCEEEEEEEEECC
>Mature Secondary Structure
MQLFKIFIFVVFILFVFNLGYSQENYKDKMIKSIDFNGLKNIKENDLKFILNVYLGQTYS
CHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHEEEEHHHCCCCC
DELFDRLQVDLYALDYFEGLIRPEFRIEDDKLVITFFVKEKSLVKTVTFIDDSGIFWNSE
HHHHHHHHHHHEEEHHHHHHCCCCEEECCCCEEEEEEECCCCEEEEEEEEECCCCEECCC
LRDKSDVKVKEALNLSRIKKSVVKFEEMYKDAGYLDVTVEFDIKEENSLVDIVFKINAGP
CCCCCCCHHHHHHCHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCEEEEEEEECCCC
KYVVKEVSFEGNLNFKSRILRKYLVSKPSSLFADGKYLKSNVDKDKMRLESYYKNNGYIN
CEEEEEEECCCCCCHHHHHHHHHHHCCCHHHHCCCHHHHCCCCHHHHHHHHHHCCCCEEE
AKVVNNTVDIRIPSDSKKMEREVYLKYFISEGNIFKFGKFEITGNLVFKLEELQSLITFR
EEEECCEEEEEECCCCHHHHHHEEEEEEECCCCEEEEEEEEEECEEEEEHHHHHHHHHHC
EGDIFDDSRFEQDFAKIRDKYYSDGYIFTEIVPSRTIRDEFVDYSINILEKEKAHIESIT
CCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHCCEEEEEECCCCEEEEEE
VSGNKKTASHVILREIPLMEGDVFSLEKLRMGMLNLQRLGYFGNVIPDVVPSSIEGLMKI
ECCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCHHCCHHHHHCCHHHHCEEEE
NFVVEERETASLRFGMNFGGVSNSWLPFSVFGQWEQSNFLGEGYALSARLNLAFSEQSFR
EEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEEEEEECCCCEE
LMFEDNWFMQTRWTLGGFIDFSHSINTAYQDINGPIFIGKKEVPDPFVSWEAYNNDKNFS
EEEECCEEEEEEECCCEEEEECCCCHHHHHHCCCCEEECCCCCCCCCEEEEEECCCCCCC
DFNIMNYSLAKFSISGFTGYTFSNYLGKQSFVGTVQTALKYVYYDNNVNRPSNYYLRDNY
CEEEEEEEEEEEEECCCCCCHHHHHCCCHHHHHHHHHHEEEEEECCCCCCCCCEEEECCC
NTIRFENSFGISVAWDTRNSQSLSNNGFLLKQQFDFFGGFLLGQSHFSKSTTTFERYFSL
CEEEEECCCCEEEEECCCCCCCCCCCCEEEEEEHHHHHHEEECCHHCCCCHHHHHHHHHH
LGYQDVFTPYFDLILTLRSVYSNVLPPLGNGFEIEVQPHHLIVISENFMIARGWGTLSNI
HCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEEECCEEEEECCCHHHHH
YSSFVNTLQISMPLIKNILVWDILFLDMASYSLEGQENSLFVPFSNFIFSWGFGIRSVLP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHCCCHHHHHH
QMPLSFVIAYPFYFSNEGVNRYYNYSGGFKFFLAIDMRY
HCCCEEEEEECEEECCCCCCEEEECCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]