| Definition | Borrelia hermsii DAH chromosome, complete genome. |
|---|---|
| Accession | NC_010673 |
| Length | 922,307 |
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The map label for this gene is 187918605
Identifier: 187918605
GI number: 187918605
Start: 803114
End: 804706
Strand: Direct
Name: 187918605
Synonym: BH0749
Alternate gene names: NA
Gene position: 803114-804706 (Clockwise)
Preceding gene: 187918601
Following gene: 187918699
Centisome position: 87.08
GC content: 31.58
Gene sequence:
>1593_bases ATGACAAATCATAAAAATTCTTTTTTTATTAAGGCAGGTCCTAGTGAAGTTGATTTCGATATGGATAGTGTGTTTTTACA GCATTCAGTTGATGGCAAAATTGTTTCCCTGCGTTCTGATGAGATTAAAGATCTTTTAGATGAGAAATTATTAAAACTTG ATTATTCTTTAGCTCAAAGACATGGTGAGTTAGTTAATTATTTGAGAAAGGTTGAGGGTCGTATTTCAAGGGTTGAAGAT GAAATACTTGGACGTAATTTGAACTTTCTTGAGGAATTTGATAATCCTAATTTGAAATCAATGAATCTTATGAGCTCTCA GAGTGAAGCTAATGTTAAAGATAATGAGTTTGGTGAATTAGTAAGAAAAGAAAATAATTTGCCAAATATTTCACTTGATC AAGAAGAGTTAGATGCTTTGCTTGAAGGACTTAATGAAATTTCAAGGGATGACAAGAAAAGCTTTAGTAGTAACAATAAT TTGGAAAATGATTCTGATGTAGGCATCTCTTTTGAAGACGCTCCTAAAAATGAGCTTAATGGTTTGGGTATAGAGCATAA TTTATCTGCGCAAGCAGAGAATAATATGCATAATGTTGTTGATGCGTTGTCTAACAAAGAAGATAGAGAACCTTTAGGTG TTGATTTGATTACATCCCAGGATAATGATTTATTGGGTAAGTCTTCTTTTGGTGCAGCTAATATTGTTAATGGTGATGGT AGTAAGGGTCAAGATTTGATGATAAACTTAGATGGAGATGATAAAGTTTTAAGAGAGCCTATAGTAGGTAAGAGTTCCCT TGGTGTTGATTTGGAGATTGAAAATAATGTTCATTCAGGTGATTTTGTCCTTAATGAAGCTTCCTTTAATGTAGAGAGTG TACAGGAAGAAAATATTTCATCTTATGAGCAAGATGATTTAAGAGGGCATGAGCATCCTTTAGATGATGGTTTGAGTGAA ATTGAATATTCAGCTGAAAACTTAGAGGATTTAAATAGGGAAGAATTTAAGGAAGGGAATGAAGAATTAAGTGATGTTAA TGATATTATTGCTCATGAAATTGATAATGTAGATGTAAATTTGAGTGGTGATGTACTTTTACATGAAGTAAATGATGGTA TTGATAGTAGTGTTTTGAAACAAAAACAGGAAATTGATAATGTTTCTTCTGGTTTAAAAAAGCTTGATAATTTTGAAGAT GTATTAAAGGCAGATTTGAATTGTATGGACTTGCAAGGTTGTATTAAAGATTTTGAAGAGAAGAATCTTTATGATACTGA TATAAGTGATTTAGAAGAGAAGTTGGGGCAGGATGAAGGGTTGGATTCATATACTTCAAAGGAGCAAGAGATTCGAGATG ATAATGATACTTCTGATTTTAGTTTTGCTGATGTTGAGACCATAATAAATAAGTTTAATGATAATGAGTATTTAAGTAAG ATTAAATTGAGTTGTGAAGAACGGGCTGTATTAGTTAGGTTTATTAGTAGATTAGAGGGCGATCTTGATTCTAGCCCTAA GGGTAATAGTTTTAAAATTAAAAAAGAATATGAGATTTTGCAAAAAATTAAGCGTTTACTGGTAAGAGAGTAG
Upstream 100 bases:
>100_bases TGTAATTATATCTTTAATATATTATATTTACAAGTATATAGTCGTTGACTATGGGTGTTTGTAACCTTTATTTAAGTAGA TTTGGAGAATAACTTTTAAT
Downstream 100 bases:
>100_bases GGCTATCTATTTAATTAGATATTATTTTTTATTTTTTGTTGCTTCAGTTTTATTTTTATTTTTAACTTTTTTTTATTTTA TTAATGAGTTTTTAAATCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 530; Mature: 529
Protein sequence:
>530_residues MTNHKNSFFIKAGPSEVDFDMDSVFLQHSVDGKIVSLRSDEIKDLLDEKLLKLDYSLAQRHGELVNYLRKVEGRISRVED EILGRNLNFLEEFDNPNLKSMNLMSSQSEANVKDNEFGELVRKENNLPNISLDQEELDALLEGLNEISRDDKKSFSSNNN LENDSDVGISFEDAPKNELNGLGIEHNLSAQAENNMHNVVDALSNKEDREPLGVDLITSQDNDLLGKSSFGAANIVNGDG SKGQDLMINLDGDDKVLREPIVGKSSLGVDLEIENNVHSGDFVLNEASFNVESVQEENISSYEQDDLRGHEHPLDDGLSE IEYSAENLEDLNREEFKEGNEELSDVNDIIAHEIDNVDVNLSGDVLLHEVNDGIDSSVLKQKQEIDNVSSGLKKLDNFED VLKADLNCMDLQGCIKDFEEKNLYDTDISDLEEKLGQDEGLDSYTSKEQEIRDDNDTSDFSFADVETIINKFNDNEYLSK IKLSCEERAVLVRFISRLEGDLDSSPKGNSFKIKKEYEILQKIKRLLVRE
Sequences:
>Translated_530_residues MTNHKNSFFIKAGPSEVDFDMDSVFLQHSVDGKIVSLRSDEIKDLLDEKLLKLDYSLAQRHGELVNYLRKVEGRISRVED EILGRNLNFLEEFDNPNLKSMNLMSSQSEANVKDNEFGELVRKENNLPNISLDQEELDALLEGLNEISRDDKKSFSSNNN LENDSDVGISFEDAPKNELNGLGIEHNLSAQAENNMHNVVDALSNKEDREPLGVDLITSQDNDLLGKSSFGAANIVNGDG SKGQDLMINLDGDDKVLREPIVGKSSLGVDLEIENNVHSGDFVLNEASFNVESVQEENISSYEQDDLRGHEHPLDDGLSE IEYSAENLEDLNREEFKEGNEELSDVNDIIAHEIDNVDVNLSGDVLLHEVNDGIDSSVLKQKQEIDNVSSGLKKLDNFED VLKADLNCMDLQGCIKDFEEKNLYDTDISDLEEKLGQDEGLDSYTSKEQEIRDDNDTSDFSFADVETIINKFNDNEYLSK IKLSCEERAVLVRFISRLEGDLDSSPKGNSFKIKKEYEILQKIKRLLVRE >Mature_529_residues TNHKNSFFIKAGPSEVDFDMDSVFLQHSVDGKIVSLRSDEIKDLLDEKLLKLDYSLAQRHGELVNYLRKVEGRISRVEDE ILGRNLNFLEEFDNPNLKSMNLMSSQSEANVKDNEFGELVRKENNLPNISLDQEELDALLEGLNEISRDDKKSFSSNNNL ENDSDVGISFEDAPKNELNGLGIEHNLSAQAENNMHNVVDALSNKEDREPLGVDLITSQDNDLLGKSSFGAANIVNGDGS KGQDLMINLDGDDKVLREPIVGKSSLGVDLEIENNVHSGDFVLNEASFNVESVQEENISSYEQDDLRGHEHPLDDGLSEI EYSAENLEDLNREEFKEGNEELSDVNDIIAHEIDNVDVNLSGDVLLHEVNDGIDSSVLKQKQEIDNVSSGLKKLDNFEDV LKADLNCMDLQGCIKDFEEKNLYDTDISDLEEKLGQDEGLDSYTSKEQEIRDDNDTSDFSFADVETIINKFNDNEYLSKI KLSCEERAVLVRFISRLEGDLDSSPKGNSFKIKKEYEILQKIKRLLVRE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59696; Mature: 59565
Theoretical pI: Translated: 4.06; Mature: 4.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNHKNSFFIKAGPSEVDFDMDSVFLQHSVDGKIVSLRSDEIKDLLDEKLLKLDYSLAQR CCCCCCCEEEEECCCCCCCCHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHH HGELVNYLRKVEGRISRVEDEILGRNLNFLEEFDNPNLKSMNLMSSQSEANVKDNEFGEL HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHCCCCCCCCCCHHHHHH VRKENNLPNISLDQEELDALLEGLNEISRDDKKSFSSNNNLENDSDVGISFEDAPKNELN HHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCEECCCCCHHHC GLGIEHNLSAQAENNMHNVVDALSNKEDREPLGVDLITSQDNDLLGKSSFGAANIVNGDG CCCCCCCCCCHHHCHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEECCCC SKGQDLMINLDGDDKVLREPIVGKSSLGVDLEIENNVHSGDFVLNEASFNVESVQEENIS CCCCEEEEEECCCHHHHHCCCCCCCCCCEEEEECCCCCCCCEEEECCCCCHHHHHHHHHH SYEQDDLRGHEHPLDDGLSEIEYSAENLEDLNREEFKEGNEELSDVNDIIAHEIDNVDVN HCCHHHCCCCCCCHHCCHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHCCCCEEE LSGDVLLHEVNDGIDSSVLKQKQEIDNVSSGLKKLDNFEDVLKADLNCMDLQGCIKDFEE CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH KNLYDTDISDLEEKLGQDEGLDSYTSKEQEIRDDNDTSDFSFADVETIINKFNDNEYLSK CCCCCCCHHHHHHHHCCCCCCCHHHCHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHH IKLSCEERAVLVRFISRLEGDLDSSPKGNSFKIKKEYEILQKIKRLLVRE HHHCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCC >Mature Secondary Structure TNHKNSFFIKAGPSEVDFDMDSVFLQHSVDGKIVSLRSDEIKDLLDEKLLKLDYSLAQR CCCCCCEEEEECCCCCCCCHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHH HGELVNYLRKVEGRISRVEDEILGRNLNFLEEFDNPNLKSMNLMSSQSEANVKDNEFGEL HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHCCCCCCCCCCHHHHHH VRKENNLPNISLDQEELDALLEGLNEISRDDKKSFSSNNNLENDSDVGISFEDAPKNELN HHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCEECCCCCHHHC GLGIEHNLSAQAENNMHNVVDALSNKEDREPLGVDLITSQDNDLLGKSSFGAANIVNGDG CCCCCCCCCCHHHCHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEECCCC SKGQDLMINLDGDDKVLREPIVGKSSLGVDLEIENNVHSGDFVLNEASFNVESVQEENIS CCCCEEEEEECCCHHHHHCCCCCCCCCCEEEEECCCCCCCCEEEECCCCCHHHHHHHHHH SYEQDDLRGHEHPLDDGLSEIEYSAENLEDLNREEFKEGNEELSDVNDIIAHEIDNVDVN HCCHHHCCCCCCCHHCCHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHCCCCEEE LSGDVLLHEVNDGIDSSVLKQKQEIDNVSSGLKKLDNFEDVLKADLNCMDLQGCIKDFEE CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH KNLYDTDISDLEEKLGQDEGLDSYTSKEQEIRDDNDTSDFSFADVETIINKFNDNEYLSK CCCCCCCHHHHHHHHCCCCCCCHHHCHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHH IKLSCEERAVLVRFISRLEGDLDSSPKGNSFKIKKEYEILQKIKRLLVRE HHHCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA