Definition Borrelia hermsii DAH chromosome, complete genome.
Accession NC_010673
Length 922,307

Click here to switch to the map view.

The map label for this gene is 187918066

Identifier: 187918066

GI number: 187918066

Start: 189482

End: 190240

Strand: Direct

Name: 187918066

Synonym: BH0193

Alternate gene names: NA

Gene position: 189482-190240 (Clockwise)

Preceding gene: 187918065

Following gene: 187918069

Centisome position: 20.54

GC content: 23.72

Gene sequence:

>759_bases
ATGCCACATACAATAAAGACTTTTATTATTGCAATGATTTTTACCTTATGTTTCAGTTGTAAAAACAGTAAAATCACAGA
TAAAAATTTTAGTTATATCATAATTTTTTCCGACGTAACGGAATATTTTTTCAAAATTGAAAATACTCCATTCATACAAG
AGGAAACACTCTTTATCAATGAAAAAGATATTGAAATTATTAAAGACAAACTAAATAATGTAAAAAAAATACTCTTAACA
CATAAATCAAGTAATGACATATTTAATGACATAATTAATGTCAATACAATTAAAAAAAAAACCTTCTATCTCTCTGAAGT
AAAGTTTTCATTAAAAAAAGCAATAGATTTTATATTCAATGACCCCTCAATAGACTTAACAACCTCATTAATAATGAAAG
ACAACACACTAAATCAAGAAGATTCAGAACACTTGGAAAAAAGTGCAAAAGAGCAGAATATAAACATTACCATAATAGAT
GACAAAAACATTCAGTACTTAAAAAATTTGATTACTCCCAAGATAACAAGTGTACTTCTATTTTCAATGAAGAATAATCG
CGTATTTTTAAAAAAATTAGCAGAATCAGCCTTTTTCAAAAAAATAGAATTTATATTGATTGGAAATACTAAAAAAGATT
TCAAAGAAGTTAATGCAAAATACATAATCAGCATTAATGAACTTGATTTAATCGAAATAACACAAAACATTAATAAAAAT
TTTCAATACGAATTCAACATTTATAACAAAACAACATAA

Upstream 100 bases:

>100_bases
TATTAATTTTAATTAACGCACAAATCTATGCTCTAATGATATCAATAATATTGCTAGGAATCATAATCTTGAATAAGAAA
ACCATTGGAAATGTAAAATA

Downstream 100 bases:

>100_bases
ATCTGATCATAAACCAACATATACTTACGTAAATTAACAAGTAACAATTGATAAAAAACATTAATTACTGATAAAAAATT
ATCAAATCAAATCTTTAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MPHTIKTFIIAMIFTLCFSCKNSKITDKNFSYIIIFSDVTEYFFKIENTPFIQEETLFINEKDIEIIKDKLNNVKKILLT
HKSSNDIFNDIINVNTIKKKTFYLSEVKFSLKKAIDFIFNDPSIDLTTSLIMKDNTLNQEDSEHLEKSAKEQNINITIID
DKNIQYLKNLITPKITSVLLFSMKNNRVFLKKLAESAFFKKIEFILIGNTKKDFKEVNAKYIISINELDLIEITQNINKN
FQYEFNIYNKTT

Sequences:

>Translated_252_residues
MPHTIKTFIIAMIFTLCFSCKNSKITDKNFSYIIIFSDVTEYFFKIENTPFIQEETLFINEKDIEIIKDKLNNVKKILLT
HKSSNDIFNDIINVNTIKKKTFYLSEVKFSLKKAIDFIFNDPSIDLTTSLIMKDNTLNQEDSEHLEKSAKEQNINITIID
DKNIQYLKNLITPKITSVLLFSMKNNRVFLKKLAESAFFKKIEFILIGNTKKDFKEVNAKYIISINELDLIEITQNINKN
FQYEFNIYNKTT
>Mature_251_residues
PHTIKTFIIAMIFTLCFSCKNSKITDKNFSYIIIFSDVTEYFFKIENTPFIQEETLFINEKDIEIIKDKLNNVKKILLTH
KSSNDIFNDIINVNTIKKKTFYLSEVKFSLKKAIDFIFNDPSIDLTTSLIMKDNTLNQEDSEHLEKSAKEQNINITIIDD
KNIQYLKNLITPKITSVLLFSMKNNRVFLKKLAESAFFKKIEFILIGNTKKDFKEVNAKYIISINELDLIEITQNINKNF
QYEFNIYNKTT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29597; Mature: 29466

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHTIKTFIIAMIFTLCFSCKNSKITDKNFSYIIIFSDVTEYFFKIENTPFIQEETLFIN
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHHEEECCCCCEECCEEEEE
EKDIEIIKDKLNNVKKILLTHKSSNDIFNDIINVNTIKKKTFYLSEVKFSLKKAIDFIFN
CCHHHHHHHHHHHHHEEEEEECCCCHHHHHHHCCCEEHHHEEHHHHHHHHHHHHHHHHCC
DPSIDLTTSLIMKDNTLNQEDSEHLEKSAKEQNINITIIDDKNIQYLKNLITPKITSVLL
CCCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHCCHHHHHHEE
FSMKNNRVFLKKLAESAFFKKIEFILIGNTKKDFKEVNAKYIISINELDLIEITQNINKN
EEECCCCHHHHHHHHHHHHHEEEEEEEECCHHHHHHCCCEEEEEECCCCHHHHHHHCCCC
FQYEFNIYNKTT
EEEEEEEEECCC
>Mature Secondary Structure 
PHTIKTFIIAMIFTLCFSCKNSKITDKNFSYIIIFSDVTEYFFKIENTPFIQEETLFIN
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHHEEECCCCCEECCEEEEE
EKDIEIIKDKLNNVKKILLTHKSSNDIFNDIINVNTIKKKTFYLSEVKFSLKKAIDFIFN
CCHHHHHHHHHHHHHEEEEEECCCCHHHHHHHCCCEEHHHEEHHHHHHHHHHHHHHHHCC
DPSIDLTTSLIMKDNTLNQEDSEHLEKSAKEQNINITIIDDKNIQYLKNLITPKITSVLL
CCCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHCCHHHHHHEE
FSMKNNRVFLKKLAESAFFKKIEFILIGNTKKDFKEVNAKYIISINELDLIEITQNINKN
EEECCCCHHHHHHHHHHHHHEEEEEEEECCHHHHHHCCCEEEEEECCCCHHHHHHHCCCC
FQYEFNIYNKTT
EEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA