| Definition | Borrelia hermsii DAH chromosome, complete genome. |
|---|---|
| Accession | NC_010673 |
| Length | 922,307 |
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The map label for this gene is 187918066
Identifier: 187918066
GI number: 187918066
Start: 189482
End: 190240
Strand: Direct
Name: 187918066
Synonym: BH0193
Alternate gene names: NA
Gene position: 189482-190240 (Clockwise)
Preceding gene: 187918065
Following gene: 187918069
Centisome position: 20.54
GC content: 23.72
Gene sequence:
>759_bases ATGCCACATACAATAAAGACTTTTATTATTGCAATGATTTTTACCTTATGTTTCAGTTGTAAAAACAGTAAAATCACAGA TAAAAATTTTAGTTATATCATAATTTTTTCCGACGTAACGGAATATTTTTTCAAAATTGAAAATACTCCATTCATACAAG AGGAAACACTCTTTATCAATGAAAAAGATATTGAAATTATTAAAGACAAACTAAATAATGTAAAAAAAATACTCTTAACA CATAAATCAAGTAATGACATATTTAATGACATAATTAATGTCAATACAATTAAAAAAAAAACCTTCTATCTCTCTGAAGT AAAGTTTTCATTAAAAAAAGCAATAGATTTTATATTCAATGACCCCTCAATAGACTTAACAACCTCATTAATAATGAAAG ACAACACACTAAATCAAGAAGATTCAGAACACTTGGAAAAAAGTGCAAAAGAGCAGAATATAAACATTACCATAATAGAT GACAAAAACATTCAGTACTTAAAAAATTTGATTACTCCCAAGATAACAAGTGTACTTCTATTTTCAATGAAGAATAATCG CGTATTTTTAAAAAAATTAGCAGAATCAGCCTTTTTCAAAAAAATAGAATTTATATTGATTGGAAATACTAAAAAAGATT TCAAAGAAGTTAATGCAAAATACATAATCAGCATTAATGAACTTGATTTAATCGAAATAACACAAAACATTAATAAAAAT TTTCAATACGAATTCAACATTTATAACAAAACAACATAA
Upstream 100 bases:
>100_bases TATTAATTTTAATTAACGCACAAATCTATGCTCTAATGATATCAATAATATTGCTAGGAATCATAATCTTGAATAAGAAA ACCATTGGAAATGTAAAATA
Downstream 100 bases:
>100_bases ATCTGATCATAAACCAACATATACTTACGTAAATTAACAAGTAACAATTGATAAAAAACATTAATTACTGATAAAAAATT ATCAAATCAAATCTTTAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 252; Mature: 251
Protein sequence:
>252_residues MPHTIKTFIIAMIFTLCFSCKNSKITDKNFSYIIIFSDVTEYFFKIENTPFIQEETLFINEKDIEIIKDKLNNVKKILLT HKSSNDIFNDIINVNTIKKKTFYLSEVKFSLKKAIDFIFNDPSIDLTTSLIMKDNTLNQEDSEHLEKSAKEQNINITIID DKNIQYLKNLITPKITSVLLFSMKNNRVFLKKLAESAFFKKIEFILIGNTKKDFKEVNAKYIISINELDLIEITQNINKN FQYEFNIYNKTT
Sequences:
>Translated_252_residues MPHTIKTFIIAMIFTLCFSCKNSKITDKNFSYIIIFSDVTEYFFKIENTPFIQEETLFINEKDIEIIKDKLNNVKKILLT HKSSNDIFNDIINVNTIKKKTFYLSEVKFSLKKAIDFIFNDPSIDLTTSLIMKDNTLNQEDSEHLEKSAKEQNINITIID DKNIQYLKNLITPKITSVLLFSMKNNRVFLKKLAESAFFKKIEFILIGNTKKDFKEVNAKYIISINELDLIEITQNINKN FQYEFNIYNKTT >Mature_251_residues PHTIKTFIIAMIFTLCFSCKNSKITDKNFSYIIIFSDVTEYFFKIENTPFIQEETLFINEKDIEIIKDKLNNVKKILLTH KSSNDIFNDIINVNTIKKKTFYLSEVKFSLKKAIDFIFNDPSIDLTTSLIMKDNTLNQEDSEHLEKSAKEQNINITIIDD KNIQYLKNLITPKITSVLLFSMKNNRVFLKKLAESAFFKKIEFILIGNTKKDFKEVNAKYIISINELDLIEITQNINKNF QYEFNIYNKTT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29597; Mature: 29466
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHTIKTFIIAMIFTLCFSCKNSKITDKNFSYIIIFSDVTEYFFKIENTPFIQEETLFIN CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHHEEECCCCCEECCEEEEE EKDIEIIKDKLNNVKKILLTHKSSNDIFNDIINVNTIKKKTFYLSEVKFSLKKAIDFIFN CCHHHHHHHHHHHHHEEEEEECCCCHHHHHHHCCCEEHHHEEHHHHHHHHHHHHHHHHCC DPSIDLTTSLIMKDNTLNQEDSEHLEKSAKEQNINITIIDDKNIQYLKNLITPKITSVLL CCCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHCCHHHHHHEE FSMKNNRVFLKKLAESAFFKKIEFILIGNTKKDFKEVNAKYIISINELDLIEITQNINKN EEECCCCHHHHHHHHHHHHHEEEEEEEECCHHHHHHCCCEEEEEECCCCHHHHHHHCCCC FQYEFNIYNKTT EEEEEEEEECCC >Mature Secondary Structure PHTIKTFIIAMIFTLCFSCKNSKITDKNFSYIIIFSDVTEYFFKIENTPFIQEETLFIN CCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHHEEECCCCCEECCEEEEE EKDIEIIKDKLNNVKKILLTHKSSNDIFNDIINVNTIKKKTFYLSEVKFSLKKAIDFIFN CCHHHHHHHHHHHHHEEEEEECCCCHHHHHHHCCCEEHHHEEHHHHHHHHHHHHHHHHCC DPSIDLTTSLIMKDNTLNQEDSEHLEKSAKEQNINITIIDDKNIQYLKNLITPKITSVLL CCCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHCCHHHHHHEE FSMKNNRVFLKKLAESAFFKKIEFILIGNTKKDFKEVNAKYIISINELDLIEITQNINKN EEECCCCHHHHHHHHHHHHHEEEEEEEECCHHHHHHCCCEEEEEECCCCHHHHHHHCCCC FQYEFNIYNKTT EEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA