| Definition | Borrelia hermsii DAH chromosome, complete genome. |
|---|---|
| Accession | NC_010673 |
| Length | 922,307 |
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The map label for this gene is fliW [H]
Identifier: 187918057
GI number: 187918057
Start: 185353
End: 185745
Strand: Direct
Name: fliW [H]
Synonym: BH0183
Alternate gene names: 187918057
Gene position: 185353-185745 (Clockwise)
Preceding gene: 187918056
Following gene: 187918058
Centisome position: 20.1
GC content: 27.23
Gene sequence:
>393_bases ATGAAAAATGAATTTAGTATAAAATTTAATTTTCCTGATGGAATACTGGGATTTGAAGAGATTAAAGAATTTATAATTAA AGACTCTGAATACAAACCCTTCTCTATCATGCAATCAATAAACGGAGAAATAAATTTTTTAGTAACATCACCCTTTAACT TTTTAGAAAAATATTTGCCAAATATAGAGGAAAAAGATTGGTTAGATGTTCAAGCAGAAAATGAAGATGAAAAAGTCATA CTATGTATAATCAACATGCATGTAAAAACCTATAAAGAAATAACGGCCAATTTAAAAGCTCCAATCATATTAAACAAAAA GAAACTAATTGGGAAACAAGCCATATCTACAAATGAAGAGCATTACCTTAGATATAGGGTCTTTAAGGAATAA
Upstream 100 bases:
>100_bases GCAATAACGGATCTTAACATGACAAGTTTAGCTTATCAGGTATCTTTAGGGGTTTCTGCAAGAATAATGCAAACAACATT ATTAGATTTTCTAAAATAAA
Downstream 100 bases:
>100_bases ATATGCTAGTATTATCAAGAAAAGCAAACGAAAGCATCAAAATAGACTCTAACATTGAAATTTCAATATTAGAAATAAAA AAAGACAGTGTTAAAATAGC
Product: flagellar assembly protein FliW
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MKNEFSIKFNFPDGILGFEEIKEFIIKDSEYKPFSIMQSINGEINFLVTSPFNFLEKYLPNIEEKDWLDVQAENEDEKVI LCIINMHVKTYKEITANLKAPIILNKKKLIGKQAISTNEEHYLRYRVFKE
Sequences:
>Translated_130_residues MKNEFSIKFNFPDGILGFEEIKEFIIKDSEYKPFSIMQSINGEINFLVTSPFNFLEKYLPNIEEKDWLDVQAENEDEKVI LCIINMHVKTYKEITANLKAPIILNKKKLIGKQAISTNEEHYLRYRVFKE >Mature_130_residues MKNEFSIKFNFPDGILGFEEIKEFIIKDSEYKPFSIMQSINGEINFLVTSPFNFLEKYLPNIEEKDWLDVQAENEDEKVI LCIINMHVKTYKEITANLKAPIILNKKKLIGKQAISTNEEHYLRYRVFKE
Specific function: Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum [H]
COG id: COG1699
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fliW family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003775 [H]
Pfam domain/function: PF02623 FliW [H]
EC number: NA
Molecular weight: Translated: 15383; Mature: 15383
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNEFSIKFNFPDGILGFEEIKEFIIKDSEYKPFSIMQSINGEINFLVTSPFNFLEKYLP CCCEEEEEEECCCCCCCHHHHHHHHHCCCCCCCHHHHHHCCCCEEEEEECCHHHHHHHCC NIEEKDWLDVQAENEDEKVILCIINMHVKTYKEITANLKAPIILNKKKLIGKQAISTNEE CCCCCCEEEEEECCCCCEEEEEEEECCHHHHHHHHCCCCCCEEECHHHHHHHHHCCCCCC HYLRYRVFKE CEEEEEEECC >Mature Secondary Structure MKNEFSIKFNFPDGILGFEEIKEFIIKDSEYKPFSIMQSINGEINFLVTSPFNFLEKYLP CCCEEEEEEECCCCCCCHHHHHHHHHCCCCCCCHHHHHHCCCCEEEEEECCHHHHHHHCC NIEEKDWLDVQAENEDEKVILCIINMHVKTYKEITANLKAPIILNKKKLIGKQAISTNEE CCCCCCEEEEEECCCCCEEEEEEEECCHHHHHHHHCCCCCCEEECHHHHHHHHHCCCCCC HYLRYRVFKE CEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA