Definition Borrelia hermsii DAH chromosome, complete genome.
Accession NC_010673
Length 922,307

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The map label for this gene is flgK [H]

Identifier: 187918055

GI number: 187918055

Start: 182193

End: 184076

Strand: Direct

Name: flgK [H]

Synonym: BH0181

Alternate gene names: 187918055

Gene position: 182193-184076 (Clockwise)

Preceding gene: 187918054

Following gene: 187918056

Centisome position: 19.75

GC content: 33.23

Gene sequence:

>1884_bases
ATGGATTCAACATTCTCAGGAATAGAAATTGGAAAGAAAAGTTTATTTGCACACAAAGATGCTATGAACACAATTGGTCA
CAACCTAACTAACACCTCAAAACCCGGGTATTCAAGACAGAGAGTTATAATGAAAACTGAAATGCCAATTTATGCTCCTC
AATTAAATAGAGCAAACAAAGCCGGTCAACTGGGTCAAGGAATGATGGTGCAATCCATAGAGCGAATAAGAGATGATTTA
CTTGACATAAGAATAGCTGAAGAATCGCATCGTCTTGGCTATTGGAATTCGAAAGATAAATTTATTTCTCTGCTTGAAAA
CATATATAATGAACCTGAAGACCAATCAATCAGAAAAAGATTAAATGATTTCTGGGATAGCTGGCAAGATTTATCAAGAC
AGCCTCAAGGATTGGCTGAAAGAAATATTACCTTAGAACGCGGACAAGCTTTCGCAGAAATAGTAAGAAGTAGATTCCAC
TCTCTTAATCGAATATACACAATGGCAAATGATGAGGTAAAAATTACAATTGAAGAGATAAATAACTATCTTAGAAATAT
CAGTGATCTCAATAGGCAAATTGCAAAAGCAATCGCCATGAAAGATCAGCCAAATGATTTAATGGATGAACGAGATTTAA
TAGTTGATAAACTAAGCAATTTAATTAGTATCTCCATAGAAAATAAGCGCGATCCCAATGAATTTTTAATTCACACAGAA
GGTAAACATCTCATTCAAGGTGCAATCGCAAATGAATTCATATTGGAAGCAGCCAATGGGCCCACAAGAACCAAATGGAA
TATTTTATGGAATAATAGAGAACCTGCCAATATTAATACGGGAAAACTAGGAGCTCTTATTAATGTAAGAGATAACGAAA
TTAAAAACGAGATTAATGAAATAGATAACATGGCAATTAATATCACAGAGCTTGTAAATGAAGTTCATATCTCAGGACAC
GGTCTTGATCAAAAAAGTGGGAGAATTTTCTTCGATCAAGAATACAAGCTAACCGATGAGAGTGGACGATATGACAGCAA
TGGAGATGGTAAGTTTGATTCTGTTCATATATTCAAAATAAACAGTACAAATGAAATTTTCCCAGAAGAAAAGCTAGGAT
TTTCAGGAATACTAAGATTTCAAGCAATCAATAAAAATGATTTCATAGAAATACCCTACCTTACAACAGACACAGTTCAA
GATATAATAAATAAAATAAATAACTCCAACTCACAAGTCACTGCAAGAATCAATGCAGAAGGAAAACTTGAAATTAAGGC
AATTAAAGAAGAAGAGAGAGATAGTGCTATCTTTAGAATTAGATACATTGAAGATTCTGGACTATTTTTAACAACTTACA
CAGGCATTTTAAATGCATCGGGAGCTGAGGGTGCTTATAACTATCAAGACGTTAATACTACTAACCAACTAATAAACACA
GCTAGCTACTCAATATCTCCTCTAAAAAATCCAGCCGCATGGCTTAAAGTATCTAAAGAAATTTCAGAAGATCCATCAAA
GATTGCATCAGGAATTAGAACTCCAACAAACAATATGCCTATTGGAAACAATGAAACAGCATTACGTATTGCATCTTTTG
TAAACTCACAAATCATGATTGGAAAGAACGTAACACTAAACGACTACTTCGCAAACACAACTTCCAATATTGCAATAAAA
GGACAAATCGCAGAAATTACAAAAAATAGCCAAGAACAAATACTTAGAAGTCTAACTGATTTAAGATTATCAATATCTGG
TGTAAATAAAGATGAAGAACTAGCAAACATGATAGAATTTCAACAATCATTTATTGCCGCAAGTAAATTCATCACCGTTT
CTGCAGAATTAATAGATACAATCATAAATAAAATGGGAGTATAA

Upstream 100 bases:

>100_bases
AAATATCACCTATAAAAACCCTTATGGGCCAAAAAGCGGAAACTTAAATGAAGCATCCGTTTTAATAAACAAAAAACTTT
AATTACTCAAGGAGTTTAAA

Downstream 100 bases:

>100_bases
TATATGATAAACAGAGTAAGTCATCCTTTGACATATGATAATTTAAAAGCATCTTCAACAGATAAGGAAGTAAAAATAAC
AAGGCTTTTGGAAAGTCTAT

Product: flagellar hook-associated protein FlgK

Products: NA

Alternate protein names: HAP1 [H]

Number of amino acids: Translated: 627; Mature: 627

Protein sequence:

>627_residues
MDSTFSGIEIGKKSLFAHKDAMNTIGHNLTNTSKPGYSRQRVIMKTEMPIYAPQLNRANKAGQLGQGMMVQSIERIRDDL
LDIRIAEESHRLGYWNSKDKFISLLENIYNEPEDQSIRKRLNDFWDSWQDLSRQPQGLAERNITLERGQAFAEIVRSRFH
SLNRIYTMANDEVKITIEEINNYLRNISDLNRQIAKAIAMKDQPNDLMDERDLIVDKLSNLISISIENKRDPNEFLIHTE
GKHLIQGAIANEFILEAANGPTRTKWNILWNNREPANINTGKLGALINVRDNEIKNEINEIDNMAINITELVNEVHISGH
GLDQKSGRIFFDQEYKLTDESGRYDSNGDGKFDSVHIFKINSTNEIFPEEKLGFSGILRFQAINKNDFIEIPYLTTDTVQ
DIINKINNSNSQVTARINAEGKLEIKAIKEEERDSAIFRIRYIEDSGLFLTTYTGILNASGAEGAYNYQDVNTTNQLINT
ASYSISPLKNPAAWLKVSKEISEDPSKIASGIRTPTNNMPIGNNETALRIASFVNSQIMIGKNVTLNDYFANTTSNIAIK
GQIAEITKNSQEQILRSLTDLRLSISGVNKDEELANMIEFQQSFIAASKFITVSAELIDTIINKMGV

Sequences:

>Translated_627_residues
MDSTFSGIEIGKKSLFAHKDAMNTIGHNLTNTSKPGYSRQRVIMKTEMPIYAPQLNRANKAGQLGQGMMVQSIERIRDDL
LDIRIAEESHRLGYWNSKDKFISLLENIYNEPEDQSIRKRLNDFWDSWQDLSRQPQGLAERNITLERGQAFAEIVRSRFH
SLNRIYTMANDEVKITIEEINNYLRNISDLNRQIAKAIAMKDQPNDLMDERDLIVDKLSNLISISIENKRDPNEFLIHTE
GKHLIQGAIANEFILEAANGPTRTKWNILWNNREPANINTGKLGALINVRDNEIKNEINEIDNMAINITELVNEVHISGH
GLDQKSGRIFFDQEYKLTDESGRYDSNGDGKFDSVHIFKINSTNEIFPEEKLGFSGILRFQAINKNDFIEIPYLTTDTVQ
DIINKINNSNSQVTARINAEGKLEIKAIKEEERDSAIFRIRYIEDSGLFLTTYTGILNASGAEGAYNYQDVNTTNQLINT
ASYSISPLKNPAAWLKVSKEISEDPSKIASGIRTPTNNMPIGNNETALRIASFVNSQIMIGKNVTLNDYFANTTSNIAIK
GQIAEITKNSQEQILRSLTDLRLSISGVNKDEELANMIEFQQSFIAASKFITVSAELIDTIINKMGV
>Mature_627_residues
MDSTFSGIEIGKKSLFAHKDAMNTIGHNLTNTSKPGYSRQRVIMKTEMPIYAPQLNRANKAGQLGQGMMVQSIERIRDDL
LDIRIAEESHRLGYWNSKDKFISLLENIYNEPEDQSIRKRLNDFWDSWQDLSRQPQGLAERNITLERGQAFAEIVRSRFH
SLNRIYTMANDEVKITIEEINNYLRNISDLNRQIAKAIAMKDQPNDLMDERDLIVDKLSNLISISIENKRDPNEFLIHTE
GKHLIQGAIANEFILEAANGPTRTKWNILWNNREPANINTGKLGALINVRDNEIKNEINEIDNMAINITELVNEVHISGH
GLDQKSGRIFFDQEYKLTDESGRYDSNGDGKFDSVHIFKINSTNEIFPEEKLGFSGILRFQAINKNDFIEIPYLTTDTVQ
DIINKINNSNSQVTARINAEGKLEIKAIKEEERDSAIFRIRYIEDSGLFLTTYTGILNASGAEGAYNYQDVNTTNQLINT
ASYSISPLKNPAAWLKVSKEISEDPSKIASGIRTPTNNMPIGNNETALRIASFVNSQIMIGKNVTLNDYFANTTSNIAIK
GQIAEITKNSQEQILRSLTDLRLSISGVNKDEELANMIEFQQSFIAASKFITVSAELIDTIINKMGV

Specific function: Unknown

COG id: COG1256

COG function: function code N; Flagellar hook-associated protein

Gene ontology:

Cell location: Secreted. Bacterial flagellum (By similarity) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787323, Length=328, Percent_Identity=22.8658536585366, Blast_Score=100, Evalue=5e-22,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR002371
- InterPro:   IPR010810 [H]

Pfam domain/function: PF06429 DUF1078; PF07196 Flagellin_IN [H]

EC number: NA

Molecular weight: Translated: 70896; Mature: 70896

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSTFSGIEIGKKSLFAHKDAMNTIGHNLTNTSKPGYSRQRVIMKTEMPIYAPQLNRANK
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCEECCCCCCCCC
AGQLGQGMMVQSIERIRDDLLDIRIAEESHRLGYWNSKDKFISLLENIYNEPEDQSIRKR
CCCCCCCHHHHHHHHHHHHHHEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHH
LNDFWDSWQDLSRQPQGLAERNITLERGQAFAEIVRSRFHSLNRIYTMANDEVKITIEEI
HHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEHHHH
NNYLRNISDLNRQIAKAIAMKDQPNDLMDERDLIVDKLSNLISISIENKRDPNEFLIHTE
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCEEEECC
GKHLIQGAIANEFILEAANGPTRTKWNILWNNREPANINTGKLGALINVRDNEIKNEINE
CHHHHHHHHHHHHHEECCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCHHHHHHHHH
IDNMAINITELVNEVHISGHGLDQKSGRIFFDQEYKLTDESGRYDSNGDGKFDSVHIFKI
HHCCEEEHHHHHHHHHHCCCCCCCCCCEEEEECCEEECCCCCCCCCCCCCCCCEEEEEEE
NSTNEIFPEEKLGFSGILRFQAINKNDFIEIPYLTTDTVQDIINKINNSNSQVTARINAE
CCCCCCCCCHHCCHHHEEEEEEECCCCCEEECCCCHHHHHHHHHHHCCCCCEEEEEECCC
GKLEIKAIKEEERDSAIFRIRYIEDSGLFLTTYTGILNASGAEGAYNYQDVNTTNQLINT
CEEEEEEECCCCCCCEEEEEEEEECCCEEEEEEEHHHCCCCCCCCCCCCCCCHHHHHHHH
ASYSISPLKNPAAWLKVSKEISEDPSKIASGIRTPTNNMPIGNNETALRIASFVNSQIMI
CCCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCEEEE
GKNVTLNDYFANTTSNIAIKGQIAEITKNSQEQILRSLTDLRLSISGVNKDEELANMIEF
CCCCEECCCCCCCCCCEEEEEEHHHHHCCCHHHHHHHHHHHEEEEECCCCHHHHHHHHHH
QQSFIAASKFITVSAELIDTIINKMGV
HHHHHHHHHHEEEEHHHHHHHHHHHCC
>Mature Secondary Structure
MDSTFSGIEIGKKSLFAHKDAMNTIGHNLTNTSKPGYSRQRVIMKTEMPIYAPQLNRANK
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCEECCCCCCCCC
AGQLGQGMMVQSIERIRDDLLDIRIAEESHRLGYWNSKDKFISLLENIYNEPEDQSIRKR
CCCCCCCHHHHHHHHHHHHHHEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHH
LNDFWDSWQDLSRQPQGLAERNITLERGQAFAEIVRSRFHSLNRIYTMANDEVKITIEEI
HHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEHHHH
NNYLRNISDLNRQIAKAIAMKDQPNDLMDERDLIVDKLSNLISISIENKRDPNEFLIHTE
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCEEEECC
GKHLIQGAIANEFILEAANGPTRTKWNILWNNREPANINTGKLGALINVRDNEIKNEINE
CHHHHHHHHHHHHHEECCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCHHHHHHHHH
IDNMAINITELVNEVHISGHGLDQKSGRIFFDQEYKLTDESGRYDSNGDGKFDSVHIFKI
HHCCEEEHHHHHHHHHHCCCCCCCCCCEEEEECCEEECCCCCCCCCCCCCCCCEEEEEEE
NSTNEIFPEEKLGFSGILRFQAINKNDFIEIPYLTTDTVQDIINKINNSNSQVTARINAE
CCCCCCCCCHHCCHHHEEEEEEECCCCCEEECCCCHHHHHHHHHHHCCCCCEEEEEECCC
GKLEIKAIKEEERDSAIFRIRYIEDSGLFLTTYTGILNASGAEGAYNYQDVNTTNQLINT
CEEEEEEECCCCCCCEEEEEEEEECCCEEEEEEEHHHCCCCCCCCCCCCCCCHHHHHHHH
ASYSISPLKNPAAWLKVSKEISEDPSKIASGIRTPTNNMPIGNNETALRIASFVNSQIMI
CCCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCEEEE
GKNVTLNDYFANTTSNIAIKGQIAEITKNSQEQILRSLTDLRLSISGVNKDEELANMIEF
CCCCEECCCCCCCCCCEEEEEEHHHHHCCCHHHHHHHHHHHEEEEECCCCHHHHHHHHHH
QQSFIAASKFITVSAELIDTIINKMGV
HHHHHHHHHHEEEEHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]