Definition Borrelia hermsii DAH chromosome, complete genome.
Accession NC_010673
Length 922,307

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The map label for this gene is yuiD [H]

Identifier: 187917949

GI number: 187917949

Start: 64921

End: 65388

Strand: Direct

Name: yuiD [H]

Synonym: BH0070

Alternate gene names: 187917949

Gene position: 64921-65388 (Clockwise)

Preceding gene: 187917948

Following gene: 187917950

Centisome position: 7.04

GC content: 29.91

Gene sequence:

>468_bases
ATGATAAAAGAGTTATTCATAAATGACCTTTTCTTATCTTGTTTCGTTTCAGGCATTGTTGCACAAATGATTAAATATAT
TATTCAAGCAATGAAGACAAAAAAAATAAAACTAAATCCAAAATATCTTTTAAAAAGCATATTCTTAGAAACAGGGGGCA
TGCCTAGCAGCCACTCTTCAACAGTAACAGCTCTTGCAACATCAATATTAATAACAGAAGGAATAAATACTAATTTTATT
ATTGCTCTGGCTTTTGCATTAATAACAATAAGAGATTCATTTGGAGTTAGGTACATGGCAGGGGTTCAAGCAGAATACCT
AAACACTTTGTCAGAACAATTAAAAATGAAAGTCAAAATTGAACCTTTAAAAATCAAAGTGGTGAAGGGGCACAAAAAAA
AGGAAGTATTTACAGGAATACTTATTGGAATAATTTCTGCATGGACAATATGTAATCGAATAATATAA

Upstream 100 bases:

>100_bases
GCAGTAATGACATAAATGTTATTGGCATTGACAAATCAGATAAAGAACATACAATAATACGAAATGGACAATTCGTAATA
TAAAACGGAGTAATCAAATC

Downstream 100 bases:

>100_bases
ACAACAAATTAAAAGGGAAAAATGAACCTACTAAAGTTTTTACATACATTGCTAATACTATTGCTAATCTCTTGCAATAT
GGCAAAATTTGGAGATTATA

Product: hypothetical membrane spanning protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MIKELFINDLFLSCFVSGIVAQMIKYIIQAMKTKKIKLNPKYLLKSIFLETGGMPSSHSSTVTALATSILITEGINTNFI
IALAFALITIRDSFGVRYMAGVQAEYLNTLSEQLKMKVKIEPLKIKVVKGHKKKEVFTGILIGIISAWTICNRII

Sequences:

>Translated_155_residues
MIKELFINDLFLSCFVSGIVAQMIKYIIQAMKTKKIKLNPKYLLKSIFLETGGMPSSHSSTVTALATSILITEGINTNFI
IALAFALITIRDSFGVRYMAGVQAEYLNTLSEQLKMKVKIEPLKIKVVKGHKKKEVFTGILIGIISAWTICNRII
>Mature_155_residues
MIKELFINDLFLSCFVSGIVAQMIKYIIQAMKTKKIKLNPKYLLKSIFLETGGMPSSHSSTVTALATSILITEGINTNFI
IALAFALITIRDSFGVRYMAGVQAEYLNTLSEQLKMKVKIEPLKIKVVKGHKKKEVFTGILIGIISAWTICNRII

Specific function: Unknown

COG id: COG1963

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003832 [H]

Pfam domain/function: PF02681 DUF212 [H]

EC number: NA

Molecular weight: Translated: 17285; Mature: 17285

Theoretical pI: Translated: 10.45; Mature: 10.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKELFINDLFLSCFVSGIVAQMIKYIIQAMKTKKIKLNPKYLLKSIFLETGGMPSSHSS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHCCCCCCCCCH
TVTALATSILITEGINTNFIIALAFALITIRDSFGVRYMAGVQAEYLNTLSEQLKMKVKI
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEE
EPLKIKVVKGHKKKEVFTGILIGIISAWTICNRII
CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIKELFINDLFLSCFVSGIVAQMIKYIIQAMKTKKIKLNPKYLLKSIFLETGGMPSSHSS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHCCCCCCCCCH
TVTALATSILITEGINTNFIIALAFALITIRDSFGVRYMAGVQAEYLNTLSEQLKMKVKI
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEE
EPLKIKVVKGHKKKEVFTGILIGIISAWTICNRII
CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]