Definition Borrelia hermsii DAH chromosome, complete genome.
Accession NC_010673
Length 922,307

Click here to switch to the map view.

The map label for this gene is 187917948

Identifier: 187917948

GI number: 187917948

Start: 63665

End: 64903

Strand: Direct

Name: 187917948

Synonym: BH0069

Alternate gene names: NA

Gene position: 63665-64903 (Clockwise)

Preceding gene: 187917947

Following gene: 187917949

Centisome position: 6.9

GC content: 30.99

Gene sequence:

>1239_bases
ATGAAGAAAGACTTAATAAAATATGCAGAGCTCATTATATTAAAAGGAATCAACTTGCAAAAAAATCAATGCGTGCTCAT
TACAGGTTCAATTGAAAATTATGAATTTTTAAGAATTCTGGCACAAAAAGCTTATGAACATGGAGCAAAATATGTAGAAT
TAAACATTGAAGACGCTGATATTTTAAAAACTAGATTAAAATCATCACCAGAAGATCTCTTAGAGTTTATTCCAGATTTT
AAGCATAAATTTTTTGAAGAAATGGTAAATGAAAAATGGGCAAAGATACGAATTGATAACACAGAAAATTTAGACGCATT
AAAAGATAATGACAGTAAAAAAATATCAAAATACTTTAAGGCACTAAGTCTAGCATCAAAAAAATTTTCAAGTGCAATAA
TGAATAACGAATTAGCATGGTGTACGGTTTGTGCTCCCGGGCCAAAATGGGCTGCAAAAGTCCTAAATAAACCTGAATGT
CAAAAAACATTAGAAGAATTTTTTGACATTCAAAAAAAAATCATGTTACTCGACTCAGAAAATCCAATAAAGGCCTGGGA
AGATCATGGAAAAAAACTTCATCAAAGATGTGAAATCCTAAATAAACTCAAATTAGAAAAAATGATCTTTAAAAATAAGA
AAACAAATCTAGAAATATACCTTCTAGAAAATTCTATTTGGACAGGAGGAAGTGAAAAAGTAAAAGGAACAGATATTGAA
TTTAATGCTAATATGCCTACTCAGGAAGTTTTTACAACTCCAAACTATAAAAAAACAAATGGAATCATGCATGTCACCCG
TCCAATAACGGTACTTGGAAACCTAATAACCGGAATATGGTTAGAATTCAGAGAAGGAAAAGTAATCAACTTTGGATGTG
ATGATGATCAATCAAGAAACATATTAAAAAGACATATAGAAACTGACATACAAGCACAATATATAGGTGAAGTTGCACTA
GTAGACAATAGCTCTCCAATATATCAAAGCGGGCTCACGTTTTACAGCATACTATACGATGAAAATGCAAGTTGCCACAT
TGCCCTAGGCAATGCCTATCCCTCTTGTTTAAGCAATGAACAAGAACTTAAGAGTGATGATGCAAAATTAGATTACGGCT
GTAATGTCTCTTTAATTCATACAGACTTTATGATTGGCAGTAATGACATAAATGTTATTGGCATTGACAAATCAGATAAA
GAACATACAATAATACGAAATGGACAATTCGTAATATAA

Upstream 100 bases:

>100_bases
GCTATCGTATTTAGAAATAATAGACACTAATGACAATGAAGCTGTTGCACATTACATTAATGACAACATTTTAGAAGACC
CTGTATAGCAAGGATATAAT

Downstream 100 bases:

>100_bases
AACGGAGTAATCAAATCATGATAAAAGAGTTATTCATAAATGACCTTTTCTTATCTTGTTTCGTTTCAGGCATTGTTGCA
CAAATGATTAAATATATTAT

Product: hypothetical protein

Products: NA

Alternate protein names: Aminopeptidase II; AP-II [H]

Number of amino acids: Translated: 412; Mature: 412

Protein sequence:

>412_residues
MKKDLIKYAELIILKGINLQKNQCVLITGSIENYEFLRILAQKAYEHGAKYVELNIEDADILKTRLKSSPEDLLEFIPDF
KHKFFEEMVNEKWAKIRIDNTENLDALKDNDSKKISKYFKALSLASKKFSSAIMNNELAWCTVCAPGPKWAAKVLNKPEC
QKTLEEFFDIQKKIMLLDSENPIKAWEDHGKKLHQRCEILNKLKLEKMIFKNKKTNLEIYLLENSIWTGGSEKVKGTDIE
FNANMPTQEVFTTPNYKKTNGIMHVTRPITVLGNLITGIWLEFREGKVINFGCDDDQSRNILKRHIETDIQAQYIGEVAL
VDNSSPIYQSGLTFYSILYDENASCHIALGNAYPSCLSNEQELKSDDAKLDYGCNVSLIHTDFMIGSNDINVIGIDKSDK
EHTIIRNGQFVI

Sequences:

>Translated_412_residues
MKKDLIKYAELIILKGINLQKNQCVLITGSIENYEFLRILAQKAYEHGAKYVELNIEDADILKTRLKSSPEDLLEFIPDF
KHKFFEEMVNEKWAKIRIDNTENLDALKDNDSKKISKYFKALSLASKKFSSAIMNNELAWCTVCAPGPKWAAKVLNKPEC
QKTLEEFFDIQKKIMLLDSENPIKAWEDHGKKLHQRCEILNKLKLEKMIFKNKKTNLEIYLLENSIWTGGSEKVKGTDIE
FNANMPTQEVFTTPNYKKTNGIMHVTRPITVLGNLITGIWLEFREGKVINFGCDDDQSRNILKRHIETDIQAQYIGEVAL
VDNSSPIYQSGLTFYSILYDENASCHIALGNAYPSCLSNEQELKSDDAKLDYGCNVSLIHTDFMIGSNDINVIGIDKSDK
EHTIIRNGQFVI
>Mature_412_residues
MKKDLIKYAELIILKGINLQKNQCVLITGSIENYEFLRILAQKAYEHGAKYVELNIEDADILKTRLKSSPEDLLEFIPDF
KHKFFEEMVNEKWAKIRIDNTENLDALKDNDSKKISKYFKALSLASKKFSSAIMNNELAWCTVCAPGPKWAAKVLNKPEC
QKTLEEFFDIQKKIMLLDSENPIKAWEDHGKKLHQRCEILNKLKLEKMIFKNKKTNLEIYLLENSIWTGGSEKVKGTDIE
FNANMPTQEVFTTPNYKKTNGIMHVTRPITVLGNLITGIWLEFREGKVINFGCDDDQSRNILKRHIETDIQAQYIGEVAL
VDNSSPIYQSGLTFYSILYDENASCHIALGNAYPSCLSNEQELKSDDAKLDYGCNVSLIHTDFMIGSNDINVIGIDKSDK
EHTIIRNGQFVI

Specific function: Broad specificity metal-dependent exopeptidase, releasing all N-terminal amino acids [H]

COG id: COG2309

COG function: function code E; Leucyl aminopeptidase (aminopeptidase T)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M29 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000787 [H]

Pfam domain/function: PF02073 Peptidase_M29 [H]

EC number: NA

Molecular weight: Translated: 47151; Mature: 47151

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKDLIKYAELIILKGINLQKNQCVLITGSIENYEFLRILAQKAYEHGAKYVELNIEDAD
CCHHHHHHHHHHHEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCHHH
ILKTRLKSSPEDLLEFIPDFKHKFFEEMVNEKWAKIRIDNTENLDALKDNDSKKISKYFK
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHH
ALSLASKKFSSAIMNNELAWCTVCAPGPKWAAKVLNKPECQKTLEEFFDIQKKIMLLDSE
HHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHEEEEECCC
NPIKAWEDHGKKLHQRCEILNKLKLEKMIFKNKKTNLEIYLLENSIWTGGSEKVKGTDIE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCEECCCCCCCCCCEEE
FNANMPTQEVFTTPNYKKTNGIMHVTRPITVLGNLITGIWLEFREGKVINFGCDDDQSRN
EECCCCHHHHCCCCCCCCCCCEEEECHHHHHHHHHHHHHEEEECCCEEEEECCCCCHHHH
ILKRHIETDIQAQYIGEVALVDNSSPIYQSGLTFYSILYDENASCHIALGNAYPSCLSNE
HHHHHHHCCCCHHHCCEEEEEECCCCHHHCCCEEEEEEECCCCEEEEEECCCCCHHCCCC
QELKSDDAKLDYGCNVSLIHTDFMIGSNDINVIGIDKSDKEHTIIRNGQFVI
HHHCCCCCCCCCCCCEEEEEEEEEECCCCEEEEECCCCCCCCEEEECCCEEC
>Mature Secondary Structure
MKKDLIKYAELIILKGINLQKNQCVLITGSIENYEFLRILAQKAYEHGAKYVELNIEDAD
CCHHHHHHHHHHHEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCHHH
ILKTRLKSSPEDLLEFIPDFKHKFFEEMVNEKWAKIRIDNTENLDALKDNDSKKISKYFK
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHH
ALSLASKKFSSAIMNNELAWCTVCAPGPKWAAKVLNKPECQKTLEEFFDIQKKIMLLDSE
HHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHEEEEECCC
NPIKAWEDHGKKLHQRCEILNKLKLEKMIFKNKKTNLEIYLLENSIWTGGSEKVKGTDIE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCEECCCCCCCCCCEEE
FNANMPTQEVFTTPNYKKTNGIMHVTRPITVLGNLITGIWLEFREGKVINFGCDDDQSRN
EECCCCHHHHCCCCCCCCCCCEEEECHHHHHHHHHHHHHEEEECCCEEEEECCCCCHHHH
ILKRHIETDIQAQYIGEVALVDNSSPIYQSGLTFYSILYDENASCHIALGNAYPSCLSNE
HHHHHHHCCCCHHHCCEEEEEECCCCHHHCCCEEEEEEECCCCEEEEEECCCCCHHCCCC
QELKSDDAKLDYGCNVSLIHTDFMIGSNDINVIGIDKSDKEHTIIRNGQFVI
HHHCCCCCCCCCCCCEEEEEEEEEECCCCEEEEECCCCCCCCEEEECCCEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9362117; 938681 [H]