| Definition | Borrelia hermsii DAH chromosome, complete genome. |
|---|---|
| Accession | NC_010673 |
| Length | 922,307 |
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The map label for this gene is 187917948
Identifier: 187917948
GI number: 187917948
Start: 63665
End: 64903
Strand: Direct
Name: 187917948
Synonym: BH0069
Alternate gene names: NA
Gene position: 63665-64903 (Clockwise)
Preceding gene: 187917947
Following gene: 187917949
Centisome position: 6.9
GC content: 30.99
Gene sequence:
>1239_bases ATGAAGAAAGACTTAATAAAATATGCAGAGCTCATTATATTAAAAGGAATCAACTTGCAAAAAAATCAATGCGTGCTCAT TACAGGTTCAATTGAAAATTATGAATTTTTAAGAATTCTGGCACAAAAAGCTTATGAACATGGAGCAAAATATGTAGAAT TAAACATTGAAGACGCTGATATTTTAAAAACTAGATTAAAATCATCACCAGAAGATCTCTTAGAGTTTATTCCAGATTTT AAGCATAAATTTTTTGAAGAAATGGTAAATGAAAAATGGGCAAAGATACGAATTGATAACACAGAAAATTTAGACGCATT AAAAGATAATGACAGTAAAAAAATATCAAAATACTTTAAGGCACTAAGTCTAGCATCAAAAAAATTTTCAAGTGCAATAA TGAATAACGAATTAGCATGGTGTACGGTTTGTGCTCCCGGGCCAAAATGGGCTGCAAAAGTCCTAAATAAACCTGAATGT CAAAAAACATTAGAAGAATTTTTTGACATTCAAAAAAAAATCATGTTACTCGACTCAGAAAATCCAATAAAGGCCTGGGA AGATCATGGAAAAAAACTTCATCAAAGATGTGAAATCCTAAATAAACTCAAATTAGAAAAAATGATCTTTAAAAATAAGA AAACAAATCTAGAAATATACCTTCTAGAAAATTCTATTTGGACAGGAGGAAGTGAAAAAGTAAAAGGAACAGATATTGAA TTTAATGCTAATATGCCTACTCAGGAAGTTTTTACAACTCCAAACTATAAAAAAACAAATGGAATCATGCATGTCACCCG TCCAATAACGGTACTTGGAAACCTAATAACCGGAATATGGTTAGAATTCAGAGAAGGAAAAGTAATCAACTTTGGATGTG ATGATGATCAATCAAGAAACATATTAAAAAGACATATAGAAACTGACATACAAGCACAATATATAGGTGAAGTTGCACTA GTAGACAATAGCTCTCCAATATATCAAAGCGGGCTCACGTTTTACAGCATACTATACGATGAAAATGCAAGTTGCCACAT TGCCCTAGGCAATGCCTATCCCTCTTGTTTAAGCAATGAACAAGAACTTAAGAGTGATGATGCAAAATTAGATTACGGCT GTAATGTCTCTTTAATTCATACAGACTTTATGATTGGCAGTAATGACATAAATGTTATTGGCATTGACAAATCAGATAAA GAACATACAATAATACGAAATGGACAATTCGTAATATAA
Upstream 100 bases:
>100_bases GCTATCGTATTTAGAAATAATAGACACTAATGACAATGAAGCTGTTGCACATTACATTAATGACAACATTTTAGAAGACC CTGTATAGCAAGGATATAAT
Downstream 100 bases:
>100_bases AACGGAGTAATCAAATCATGATAAAAGAGTTATTCATAAATGACCTTTTCTTATCTTGTTTCGTTTCAGGCATTGTTGCA CAAATGATTAAATATATTAT
Product: hypothetical protein
Products: NA
Alternate protein names: Aminopeptidase II; AP-II [H]
Number of amino acids: Translated: 412; Mature: 412
Protein sequence:
>412_residues MKKDLIKYAELIILKGINLQKNQCVLITGSIENYEFLRILAQKAYEHGAKYVELNIEDADILKTRLKSSPEDLLEFIPDF KHKFFEEMVNEKWAKIRIDNTENLDALKDNDSKKISKYFKALSLASKKFSSAIMNNELAWCTVCAPGPKWAAKVLNKPEC QKTLEEFFDIQKKIMLLDSENPIKAWEDHGKKLHQRCEILNKLKLEKMIFKNKKTNLEIYLLENSIWTGGSEKVKGTDIE FNANMPTQEVFTTPNYKKTNGIMHVTRPITVLGNLITGIWLEFREGKVINFGCDDDQSRNILKRHIETDIQAQYIGEVAL VDNSSPIYQSGLTFYSILYDENASCHIALGNAYPSCLSNEQELKSDDAKLDYGCNVSLIHTDFMIGSNDINVIGIDKSDK EHTIIRNGQFVI
Sequences:
>Translated_412_residues MKKDLIKYAELIILKGINLQKNQCVLITGSIENYEFLRILAQKAYEHGAKYVELNIEDADILKTRLKSSPEDLLEFIPDF KHKFFEEMVNEKWAKIRIDNTENLDALKDNDSKKISKYFKALSLASKKFSSAIMNNELAWCTVCAPGPKWAAKVLNKPEC QKTLEEFFDIQKKIMLLDSENPIKAWEDHGKKLHQRCEILNKLKLEKMIFKNKKTNLEIYLLENSIWTGGSEKVKGTDIE FNANMPTQEVFTTPNYKKTNGIMHVTRPITVLGNLITGIWLEFREGKVINFGCDDDQSRNILKRHIETDIQAQYIGEVAL VDNSSPIYQSGLTFYSILYDENASCHIALGNAYPSCLSNEQELKSDDAKLDYGCNVSLIHTDFMIGSNDINVIGIDKSDK EHTIIRNGQFVI >Mature_412_residues MKKDLIKYAELIILKGINLQKNQCVLITGSIENYEFLRILAQKAYEHGAKYVELNIEDADILKTRLKSSPEDLLEFIPDF KHKFFEEMVNEKWAKIRIDNTENLDALKDNDSKKISKYFKALSLASKKFSSAIMNNELAWCTVCAPGPKWAAKVLNKPEC QKTLEEFFDIQKKIMLLDSENPIKAWEDHGKKLHQRCEILNKLKLEKMIFKNKKTNLEIYLLENSIWTGGSEKVKGTDIE FNANMPTQEVFTTPNYKKTNGIMHVTRPITVLGNLITGIWLEFREGKVINFGCDDDQSRNILKRHIETDIQAQYIGEVAL VDNSSPIYQSGLTFYSILYDENASCHIALGNAYPSCLSNEQELKSDDAKLDYGCNVSLIHTDFMIGSNDINVIGIDKSDK EHTIIRNGQFVI
Specific function: Broad specificity metal-dependent exopeptidase, releasing all N-terminal amino acids [H]
COG id: COG2309
COG function: function code E; Leucyl aminopeptidase (aminopeptidase T)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M29 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000787 [H]
Pfam domain/function: PF02073 Peptidase_M29 [H]
EC number: NA
Molecular weight: Translated: 47151; Mature: 47151
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKDLIKYAELIILKGINLQKNQCVLITGSIENYEFLRILAQKAYEHGAKYVELNIEDAD CCHHHHHHHHHHHEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCHHH ILKTRLKSSPEDLLEFIPDFKHKFFEEMVNEKWAKIRIDNTENLDALKDNDSKKISKYFK HHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHH ALSLASKKFSSAIMNNELAWCTVCAPGPKWAAKVLNKPECQKTLEEFFDIQKKIMLLDSE HHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHEEEEECCC NPIKAWEDHGKKLHQRCEILNKLKLEKMIFKNKKTNLEIYLLENSIWTGGSEKVKGTDIE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCEECCCCCCCCCCEEE FNANMPTQEVFTTPNYKKTNGIMHVTRPITVLGNLITGIWLEFREGKVINFGCDDDQSRN EECCCCHHHHCCCCCCCCCCCEEEECHHHHHHHHHHHHHEEEECCCEEEEECCCCCHHHH ILKRHIETDIQAQYIGEVALVDNSSPIYQSGLTFYSILYDENASCHIALGNAYPSCLSNE HHHHHHHCCCCHHHCCEEEEEECCCCHHHCCCEEEEEEECCCCEEEEEECCCCCHHCCCC QELKSDDAKLDYGCNVSLIHTDFMIGSNDINVIGIDKSDKEHTIIRNGQFVI HHHCCCCCCCCCCCCEEEEEEEEEECCCCEEEEECCCCCCCCEEEECCCEEC >Mature Secondary Structure MKKDLIKYAELIILKGINLQKNQCVLITGSIENYEFLRILAQKAYEHGAKYVELNIEDAD CCHHHHHHHHHHHEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCHHH ILKTRLKSSPEDLLEFIPDFKHKFFEEMVNEKWAKIRIDNTENLDALKDNDSKKISKYFK HHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHH ALSLASKKFSSAIMNNELAWCTVCAPGPKWAAKVLNKPECQKTLEEFFDIQKKIMLLDSE HHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHEEEEECCC NPIKAWEDHGKKLHQRCEILNKLKLEKMIFKNKKTNLEIYLLENSIWTGGSEKVKGTDIE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCEECCCCCCCCCCEEE FNANMPTQEVFTTPNYKKTNGIMHVTRPITVLGNLITGIWLEFREGKVINFGCDDDQSRN EECCCCHHHHCCCCCCCCCCCEEEECHHHHHHHHHHHHHEEEECCCEEEEECCCCCHHHH ILKRHIETDIQAQYIGEVALVDNSSPIYQSGLTFYSILYDENASCHIALGNAYPSCLSNE HHHHHHHCCCCHHHCCEEEEEECCCCHHHCCCEEEEEEECCCCEEEEEECCCCCHHCCCC QELKSDDAKLDYGCNVSLIHTDFMIGSNDINVIGIDKSDKEHTIIRNGQFVI HHHCCCCCCCCCCCCEEEEEEEEEECCCCEEEEECCCCCCCCEEEECCCEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9362117; 938681 [H]