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The map label for this gene is rsmE1 [H]

Identifier: 187917941

GI number: 187917941

Start: 56882

End: 57604

Strand: Direct

Name: rsmE1 [H]

Synonym: BH0062

Alternate gene names: 187917941

Gene position: 56882-57604 (Clockwise)

Preceding gene: 187917932

Following gene: 187917947

Centisome position: 6.17

GC content: 26.56

Gene sequence:

>723_bases
ATGAACTTGATATTAATAAACCCAGATGAATTTGAAAATGGACTTATGCTCAATGACTTAAGAGTAAAACACATTAATGA
AATATTAAAACTTAAAAATAATGAGACATTTAAATTTGGCATTCTTGGAGAAGAACACATTTACTCATGCATATACCAAA
AAGATACAAAGCTTTTTTTTAAAAAACATCATAAAATAGCAAAATCAAATAAGCTAAAAAAGTTAAAAGTAATAATTGGT
TTAGTACGGCCAATTGCAGCAAAAAGAATAATCACACACCTTGGAAGCATTGGGATATCTGAAATTATTTTTTTTAATGC
TTTACTTAGTGAAAAATCCTATTCATGTTCCAAGCTCTTTAAAAAAAAAGAATATGAAAAATATCTAATAGAAGGTGCTA
TGCAAGGTGGAATTACCTACATACCAAAAGTCAACATTATTAACAATCTCATAGAAGTTCTAAACAATACAGAATATGAT
AAATCTGATACCACAAAAATATTACTTGAGAGAGAAAGCAAGAACAAATTAGTTGATCTAAATATAGAAACAAAGAATAC
CGTTGTTATTATCGGGCCAGAGAGAGGATTTATAACAAAAGAAATAAATTTAATCAAAGAATATGATTTTAATGCATATA
ACATTTCATCAAATATTTTAAGAACAGAAACAGCTACAATCGTAGCATCCACTATTATCACATCAAAAATGAATAGTAAA
TAA

Upstream 100 bases:

>100_bases
TTCCTGCTTAGTCAAACTAATTACCATATTTTCTCCTAATTCAATCGATTTTTAATTATAACATAAATACAATATAATTA
ATAAGGAATTAGATACAGGA

Downstream 100 bases:

>100_bases
TACTTTTAAGAAACATTCAAGTTAAATTCAGCACTCAATTTACTACTGTCTGATTCACAAGCCTATCATAAATATAAAGT
TCAATTATCGAACCTTTTAA

Product: 16S ribosomal RNA methyltransferase RsmE

Products: NA

Alternate protein names: 16S rRNA m3U1498 methyltransferase 1 [H]

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MNLILINPDEFENGLMLNDLRVKHINEILKLKNNETFKFGILGEEHIYSCIYQKDTKLFFKKHHKIAKSNKLKKLKVIIG
LVRPIAAKRIITHLGSIGISEIIFFNALLSEKSYSCSKLFKKKEYEKYLIEGAMQGGITYIPKVNIINNLIEVLNNTEYD
KSDTTKILLERESKNKLVDLNIETKNTVVIIGPERGFITKEINLIKEYDFNAYNISSNILRTETATIVASTIITSKMNSK

Sequences:

>Translated_240_residues
MNLILINPDEFENGLMLNDLRVKHINEILKLKNNETFKFGILGEEHIYSCIYQKDTKLFFKKHHKIAKSNKLKKLKVIIG
LVRPIAAKRIITHLGSIGISEIIFFNALLSEKSYSCSKLFKKKEYEKYLIEGAMQGGITYIPKVNIINNLIEVLNNTEYD
KSDTTKILLERESKNKLVDLNIETKNTVVIIGPERGFITKEINLIKEYDFNAYNISSNILRTETATIVASTIITSKMNSK
>Mature_240_residues
MNLILINPDEFENGLMLNDLRVKHINEILKLKNNETFKFGILGEEHIYSCIYQKDTKLFFKKHHKIAKSNKLKKLKVIIG
LVRPIAAKRIITHLGSIGISEIIFFNALLSEKSYSCSKLFKKKEYEKYLIEGAMQGGITYIPKVNIINNLIEVLNNTEYD
KSDTTKILLERESKNKLVDLNIETKNTVVIIGPERGFITKEINLIKEYDFNAYNISSNILRTETATIVASTIITSKMNSK

Specific function: Specifically methylates the uridine in position 1498 of 16S rRNA in the fully assembled 30S ribosomal subunit [H]

COG id: COG1385

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RNA methyltransferase RsmE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006700 [H]

Pfam domain/function: PF04452 Methyltrans_RNA [H]

EC number: =2.1.1.193 [H]

Molecular weight: Translated: 27530; Mature: 27530

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLILINPDEFENGLMLNDLRVKHINEILKLKNNETFKFGILGEEHIYSCIYQKDTKLFF
CEEEEECCCCCCCCEEEEHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHH
KKHHKIAKSNKLKKLKVIIGLVRPIAAKRIITHLGSIGISEIIFFNALLSEKSYSCSKLF
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHH
KKKEYEKYLIEGAMQGGITYIPKVNIINNLIEVLNNTEYDKSDTTKILLERESKNKLVDL
HHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCEEEE
NIETKNTVVIIGPERGFITKEINLIKEYDFNAYNISSNILRTETATIVASTIITSKMNSK
EEECCCEEEEECCCCCCEEHHHHHHHHCCCCEEECCCCEEHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNLILINPDEFENGLMLNDLRVKHINEILKLKNNETFKFGILGEEHIYSCIYQKDTKLFF
CEEEEECCCCCCCCEEEEHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHH
KKHHKIAKSNKLKKLKVIIGLVRPIAAKRIITHLGSIGISEIIFFNALLSEKSYSCSKLF
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHH
KKKEYEKYLIEGAMQGGITYIPKVNIINNLIEVLNNTEYDKSDTTKILLERESKNKLVDL
HHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCEEEE
NIETKNTVVIIGPERGFITKEINLIKEYDFNAYNISSNILRTETATIVASTIITSKMNSK
EEECCCEEEEECCCCCCEEHHHHHHHHCCCCEEECCCCEEHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]