| Definition | Borrelia hermsii DAH chromosome, complete genome. |
|---|---|
| Accession | NC_010673 |
| Length | 922,307 |
Click here to switch to the map view.
The map label for this gene is 187917930
Identifier: 187917930
GI number: 187917930
Start: 47626
End: 48309
Strand: Direct
Name: 187917930
Synonym: BH0051
Alternate gene names: NA
Gene position: 47626-48309 (Clockwise)
Preceding gene: 187917929
Following gene: 187917932
Centisome position: 5.16
GC content: 25.15
Gene sequence:
>684_bases ATGATAGATATAATTTTATGGATAACTTTACTCGCATTTGTGTACCTACAATTAACATTATTGTACTATCTATTCGGAAA ATCGGGTCTTTTTTGTTTTAACATCATTATGACAATACTTTCAAATCTTATTATATTAAAAAAAGTGGTTATATTCGAAC AGCAAATGAGCTTATCGGGAATAACATTTCTCTCAATTCTTTGCTCATTAAACCTGATTACAGAAAAATATAATGAGCAA TCAGCAATAAAGTCCATAACATTAAACATGCTTATACACATAACTTTTGTAATAATGATGCATTTTACATTACATTTTCA ACAAAATGAATTTGATACTTCTAACATACATTTAAAAATATTATTTTACAATGCTTCTTATATTTCAATAATTTTCACTG GAACGTATATTATATATCTATGTAATTATGTTAATATAAAAATATATTCTATACTACAAAAGAATCATGTAAACAATAAA TGGATAAATCATAATTTGTCAAGACTATGCTCCTCGTGTATAGCTTACATGTTAGCTAATATTTCAATGCATGTAATAGC ACAATTATACCCTGGCAAGAATATTAATATGGTGGAAAGTTCATGGATTTTTACCATCATAATTATGCTCATTGATACTC TAATCTATTATTTCCTAAATACTATGAAAGTCAAAAAAACTTAA
Upstream 100 bases:
>100_bases TTCATCTACATTGCAAAATGTATATATCAAAACAAAAAAACTTCAATATGAGGGTAATATCCGTTTAACTATTACCCATT AATTTGTTATAATTAGCAAT
Downstream 100 bases:
>100_bases GTTCTTCAATAGCCTGATAGTTTTTTATAATTTTTCTATAATAATCAAGTTTTAAAACCAACTTCTCATCTTCATCTAAT AAATACCTAATAGAACTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 227; Mature: 227
Protein sequence:
>227_residues MIDIILWITLLAFVYLQLTLLYYLFGKSGLFCFNIIMTILSNLIILKKVVIFEQQMSLSGITFLSILCSLNLITEKYNEQ SAIKSITLNMLIHITFVIMMHFTLHFQQNEFDTSNIHLKILFYNASYISIIFTGTYIIYLCNYVNIKIYSILQKNHVNNK WINHNLSRLCSSCIAYMLANISMHVIAQLYPGKNINMVESSWIFTIIIMLIDTLIYYFLNTMKVKKT
Sequences:
>Translated_227_residues MIDIILWITLLAFVYLQLTLLYYLFGKSGLFCFNIIMTILSNLIILKKVVIFEQQMSLSGITFLSILCSLNLITEKYNEQ SAIKSITLNMLIHITFVIMMHFTLHFQQNEFDTSNIHLKILFYNASYISIIFTGTYIIYLCNYVNIKIYSILQKNHVNNK WINHNLSRLCSSCIAYMLANISMHVIAQLYPGKNINMVESSWIFTIIIMLIDTLIYYFLNTMKVKKT >Mature_227_residues MIDIILWITLLAFVYLQLTLLYYLFGKSGLFCFNIIMTILSNLIILKKVVIFEQQMSLSGITFLSILCSLNLITEKYNEQ SAIKSITLNMLIHITFVIMMHFTLHFQQNEFDTSNIHLKILFYNASYISIIFTGTYIIYLCNYVNIKIYSILQKNHVNNK WINHNLSRLCSSCIAYMLANISMHVIAQLYPGKNINMVESSWIFTIIIMLIDTLIYYFLNTMKVKKT
Specific function: Unknown
COG id: COG1738
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26553; Mature: 26553
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDIILWITLLAFVYLQLTLLYYLFGKSGLFCFNIIMTILSNLIILKKVVIFEQQMSLSG CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ITFLSILCSLNLITEKYNEQSAIKSITLNMLIHITFVIMMHFTLHFQQNEFDTSNIHLKI HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEEE LFYNASYISIIFTGTYIIYLCNYVNIKIYSILQKNHVNNKWINHNLSRLCSSCIAYMLAN EEEECCEEEHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHH ISMHVIAQLYPGKNINMVESSWIFTIIIMLIDTLIYYFLNTMKVKKT HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MIDIILWITLLAFVYLQLTLLYYLFGKSGLFCFNIIMTILSNLIILKKVVIFEQQMSLSG CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ITFLSILCSLNLITEKYNEQSAIKSITLNMLIHITFVIMMHFTLHFQQNEFDTSNIHLKI HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEEE LFYNASYISIIFTGTYIIYLCNYVNIKIYSILQKNHVNNKWINHNLSRLCSSCIAYMLAN EEEECCEEEHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHH ISMHVIAQLYPGKNINMVESSWIFTIIIMLIDTLIYYFLNTMKVKKT HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA