| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187736647
Identifier: 187736647
GI number: 187736647
Start: 2649195
End: 2650049
Strand: Reverse
Name: 187736647
Synonym: Amuc_2171
Alternate gene names: NA
Gene position: 2650049-2649195 (Counterclockwise)
Preceding gene: 187736650
Following gene: 187736646
Centisome position: 99.47
GC content: 58.83
Gene sequence:
>855_bases ATGAAAGAACCCATTCCCATACAACAATGGCTTCCCGCGGGGCCTCTGAGGGACATGGGTGAAAAATACGTAAGCCAGCT TCCGGACGTGGCGCAAAATCCCATCGGTCCGGAATCCCTCATGCACCAGTCGGACCATTCCTGGTCGGAATACCTGGTAG CCTATTCCCTCCTGTACCCGGGGGTAGTCATCATCCTGGCCCTGCTGGGGGGGCTGGGGCTTGGGGCTTTCTTCATTTTT TGCCGCCGCCGGGAATATTCCCACCGTATTTTCTGTTCCAAATGCGGCTCCATGATGTACCCGTGCGGGCTGCACTGCCC GGAGTGCGGCACGTCCAATCCGTCCCCCCGTGCCCTGAACTGGATAGGATATTCCAGGCTGCGCACTGTGGTTCCTCCCT CCGGATGGAAAAGGCATGAGGAAGTTCTCCGCAGTTACCGGCGGTGTTTTTACTGCGGGCAGCCTCTCCGTGAGCCCTCT CTTGACCAGCGTTGCCCCGCCTGCGGCAAGGCGGTGCTCCAGGGTGAGCAGTCCGTGGACCGGTATGATGCGTATATTGG CCGCCGCAGGGGGTGGACCTTCGCTGCCGTGGTCGTGCTGGGGGTGGTTCCCATTTTGGGGCCGCTGCTGGCTTCCTCCC TGTACAGGAGAACGCTCATCAACCCGTATTCCCTGTACATGACCGTGTACCGGGAAAGCTTCCTGATGGTGGTTCTTTTT CTGTGCCGTCATTTGTTTCGCCTGCTGCCGTTCATCGGCATCATCGGCATGCCCGTCCTTTGCGTGACGGAATACCACCT GTACCGGCGCATGTTCCTGTGGAAGGCGGAGAAATATGATTTCAGGGGGGAATGA
Upstream 100 bases:
>100_bases CCCTACCTATTCCGGCGGAGACATCCTATGCTGAATGCCGCCGTTTTCTGACAGCCTCCCGGGAAATGCTGTTTTTATGG CGAACCCTGCATGTCCAGTC
Downstream 100 bases:
>100_bases AGCAGGAGACCCTCTTCCGGTAATGCCTGTCCGGCACCTGCGCGGAAAATCATGGGGTGCGGGGCTGTTGGGGCTTCCGG GCAGCGTATCGTTTCCGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MKEPIPIQQWLPAGPLRDMGEKYVSQLPDVAQNPIGPESLMHQSDHSWSEYLVAYSLLYPGVVIILALLGGLGLGAFFIF CRRREYSHRIFCSKCGSMMYPCGLHCPECGTSNPSPRALNWIGYSRLRTVVPPSGWKRHEEVLRSYRRCFYCGQPLREPS LDQRCPACGKAVLQGEQSVDRYDAYIGRRRGWTFAAVVVLGVVPILGPLLASSLYRRTLINPYSLYMTVYRESFLMVVLF LCRHLFRLLPFIGIIGMPVLCVTEYHLYRRMFLWKAEKYDFRGE
Sequences:
>Translated_284_residues MKEPIPIQQWLPAGPLRDMGEKYVSQLPDVAQNPIGPESLMHQSDHSWSEYLVAYSLLYPGVVIILALLGGLGLGAFFIF CRRREYSHRIFCSKCGSMMYPCGLHCPECGTSNPSPRALNWIGYSRLRTVVPPSGWKRHEEVLRSYRRCFYCGQPLREPS LDQRCPACGKAVLQGEQSVDRYDAYIGRRRGWTFAAVVVLGVVPILGPLLASSLYRRTLINPYSLYMTVYRESFLMVVLF LCRHLFRLLPFIGIIGMPVLCVTEYHLYRRMFLWKAEKYDFRGE >Mature_284_residues MKEPIPIQQWLPAGPLRDMGEKYVSQLPDVAQNPIGPESLMHQSDHSWSEYLVAYSLLYPGVVIILALLGGLGLGAFFIF CRRREYSHRIFCSKCGSMMYPCGLHCPECGTSNPSPRALNWIGYSRLRTVVPPSGWKRHEEVLRSYRRCFYCGQPLREPS LDQRCPACGKAVLQGEQSVDRYDAYIGRRRGWTFAAVVVLGVVPILGPLLASSLYRRTLINPYSLYMTVYRESFLMVVLF LCRHLFRLLPFIGIIGMPVLCVTEYHLYRRMFLWKAEKYDFRGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32647; Mature: 32647
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEPIPIQQWLPAGPLRDMGEKYVSQLPDVAQNPIGPESLMHQSDHSWSEYLVAYSLLYP CCCCCCHHHCCCCCCHHHHHHHHHHHCHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHH GVVIILALLGGLGLGAFFIFCRRREYSHRIFCSKCGSMMYPCGLHCPECGTSNPSPRALN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHH WIGYSRLRTVVPPSGWKRHEEVLRSYRRCFYCGQPLREPSLDQRCPACGKAVLQGEQSVD HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHCCHHHHH RYDAYIGRRRGWTFAAVVVLGVVPILGPLLASSLYRRTLINPYSLYMTVYRESFLMVVLF HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH LCRHLFRLLPFIGIIGMPVLCVTEYHLYRRMFLWKAEKYDFRGE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKEPIPIQQWLPAGPLRDMGEKYVSQLPDVAQNPIGPESLMHQSDHSWSEYLVAYSLLYP CCCCCCHHHCCCCCCHHHHHHHHHHHCHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHH GVVIILALLGGLGLGAFFIFCRRREYSHRIFCSKCGSMMYPCGLHCPECGTSNPSPRALN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHH WIGYSRLRTVVPPSGWKRHEEVLRSYRRCFYCGQPLREPSLDQRCPACGKAVLQGEQSVD HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHCCHHHHH RYDAYIGRRRGWTFAAVVVLGVVPILGPLLASSLYRRTLINPYSLYMTVYRESFLMVVLF HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH LCRHLFRLLPFIGIIGMPVLCVTEYHLYRRMFLWKAEKYDFRGE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA