| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is nadA [H]
Identifier: 187736627
GI number: 187736627
Start: 2618412
End: 2619347
Strand: Direct
Name: nadA [H]
Synonym: Amuc_2150
Alternate gene names: 187736627
Gene position: 2618412-2619347 (Clockwise)
Preceding gene: 187736623
Following gene: 187736628
Centisome position: 98.28
GC content: 57.59
Gene sequence:
>936_bases ATGGCACCCTTTGACCTGAAAGAGGAAATCTTACGCCTGAAAGAAAAACGCAACGCCATCATTCTGGCGCACAGCTACCA GACCGGGGATATCCAGGACATGGCCGACTACGTGGGCGATTCCCTGGGGCTGGCCTACAAGGCGCAGAATACGGATTGCG ACGTGATCGCCTTCTGCGGCGTCCATTTCATGGCGGAAACCGCCAAAATTCTTAATCCGGACAAAACCGTCATCCTTCCG GATGCTGATGCCGGCTGTTCCCTGGAAGCCTCCTGCGATGCCGGGGAACTGGAAGCCTTCTTAAAGGAAAACGCCCATAA GAATTACTATGTAGTGGCGTATGTGAACTGCTCCATCGGCGTCAAGGCTCTGGCGGACGTAATCGTCACCTCCGGGAATG CCGTAAAAATCGTCTCCCAGGCTCCGGAGGACCGCCCCATCCTGTTCGTCCCGGACCAGAATCTGGGTGCATGGGTAAGC CGCCAGCTTGGCCGCCCCCTGGAACTGTGGAACGGGGCCTGCCACGTGCACATGGAGTTCACGCGGGACCAGATTCTTGC CCTGAAAGAAAAACACCCCGGTGTGCCGGTAGTGGCCCATCCGGAATGCACGGAAGCCGTGCGCCTGCTGGCGGACCATA TCTGCTCCACGGAAAAAATGATCCCCTATTGCACGGAAAACCCCGCCAAATCTTTCATCATTGTGACGGAATCCGGCATT CTGCACCGTCTCCGCAAGCTGGTGCCGGGAAAAGAATTCATTCCCGCGCCCACGGAGCAATGCTCCTGCAGCACCTGCCC GTACATGAAAATGAACACGCTGGAAAAACTGTACCTGGCCCTTCGGGACCTTTCTCCCGCCGTGGAACTGCCGAAAGACC TGCGCAGAAGGGCGGAAGCCCCGCTGCTGCGCATGCTGGAGCAATCCCAATCCTGA
Upstream 100 bases:
>100_bases GCGCCAGACTGTGCCACATTTCCCCCTTCCCGTCAACAAGCTCGCCCTGCATGGGACATGATGCTTGACTTGCCGGGGGC TTCGCCCCATCTTTTCCCGC
Downstream 100 bases:
>100_bases CCTCTGCCTTCCCCGCATGATACGCCTTTCAGACCACATCGCGGCCGCTGGCGGCTGGCTCTCCCTGGAAGCTTTCATGC AGCTGGCCCTGCACCACCCG
Product: quinolinate synthetase complex, A subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 311; Mature: 310
Protein sequence:
>311_residues MAPFDLKEEILRLKEKRNAIILAHSYQTGDIQDMADYVGDSLGLAYKAQNTDCDVIAFCGVHFMAETAKILNPDKTVILP DADAGCSLEASCDAGELEAFLKENAHKNYYVVAYVNCSIGVKALADVIVTSGNAVKIVSQAPEDRPILFVPDQNLGAWVS RQLGRPLELWNGACHVHMEFTRDQILALKEKHPGVPVVAHPECTEAVRLLADHICSTEKMIPYCTENPAKSFIIVTESGI LHRLRKLVPGKEFIPAPTEQCSCSTCPYMKMNTLEKLYLALRDLSPAVELPKDLRRRAEAPLLRMLEQSQS
Sequences:
>Translated_311_residues MAPFDLKEEILRLKEKRNAIILAHSYQTGDIQDMADYVGDSLGLAYKAQNTDCDVIAFCGVHFMAETAKILNPDKTVILP DADAGCSLEASCDAGELEAFLKENAHKNYYVVAYVNCSIGVKALADVIVTSGNAVKIVSQAPEDRPILFVPDQNLGAWVS RQLGRPLELWNGACHVHMEFTRDQILALKEKHPGVPVVAHPECTEAVRLLADHICSTEKMIPYCTENPAKSFIIVTESGI LHRLRKLVPGKEFIPAPTEQCSCSTCPYMKMNTLEKLYLALRDLSPAVELPKDLRRRAEAPLLRMLEQSQS >Mature_310_residues APFDLKEEILRLKEKRNAIILAHSYQTGDIQDMADYVGDSLGLAYKAQNTDCDVIAFCGVHFMAETAKILNPDKTVILPD ADAGCSLEASCDAGELEAFLKENAHKNYYVVAYVNCSIGVKALADVIVTSGNAVKIVSQAPEDRPILFVPDQNLGAWVSR QLGRPLELWNGACHVHMEFTRDQILALKEKHPGVPVVAHPECTEAVRLLADHICSTEKMIPYCTENPAKSFIIVTESGIL HRLRKLVPGKEFIPAPTEQCSCSTCPYMKMNTLEKLYLALRDLSPAVELPKDLRRRAEAPLLRMLEQSQS
Specific function: Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate [H]
COG id: COG0379
COG function: function code H; Quinolinate synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the quinolinate synthase A family. Type 2 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786964, Length=313, Percent_Identity=38.0191693290735, Blast_Score=203, Evalue=9e-54,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003473 - InterPro: IPR023066 [H]
Pfam domain/function: PF02445 NadA [H]
EC number: =2.5.1.72 [H]
Molecular weight: Translated: 34449; Mature: 34318
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPFDLKEEILRLKEKRNAIILAHSYQTGDIQDMADYVGDSLGLAYKAQNTDCDVIAFCG CCCCCHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHCCCHHCEEEEECCCCCCCHHHHH VHFMAETAKILNPDKTVILPDADAGCSLEASCDAGELEAFLKENAHKNYYVVAYVNCSIG HHHHHHHHHHCCCCCEEEEECCCCCCCEECCCCHHHHHHHHHHCCCCCEEEEEEEECCCC VKALADVIVTSGNAVKIVSQAPEDRPILFVPDQNLGAWVSRQLGRPLELWNGACHVHMEF HHHHHHHHHCCCCEEEEEECCCCCCCEEEECCCCHHHHHHHHCCCCHHHCCCEEEEEEEE TRDQILALKEKHPGVPVVAHPECTEAVRLLADHICSTEKMIPYCTENPAKSFIIVTESGI CCCHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCHH LHRLRKLVPGKEFIPAPTEQCSCSTCPYMKMNTLEKLYLALRDLSPAVELPKDLRRRAEA HHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHCC PLLRMLEQSQS HHHHHHHHCCC >Mature Secondary Structure APFDLKEEILRLKEKRNAIILAHSYQTGDIQDMADYVGDSLGLAYKAQNTDCDVIAFCG CCCCHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHCCCHHCEEEEECCCCCCCHHHHH VHFMAETAKILNPDKTVILPDADAGCSLEASCDAGELEAFLKENAHKNYYVVAYVNCSIG HHHHHHHHHHCCCCCEEEEECCCCCCCEECCCCHHHHHHHHHHCCCCCEEEEEEEECCCC VKALADVIVTSGNAVKIVSQAPEDRPILFVPDQNLGAWVSRQLGRPLELWNGACHVHMEF HHHHHHHHHCCCCEEEEEECCCCCCCEEEECCCCHHHHHHHHCCCCHHHCCCEEEEEEEE TRDQILALKEKHPGVPVVAHPECTEAVRLLADHICSTEKMIPYCTENPAKSFIIVTESGI CCCHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCHH LHRLRKLVPGKEFIPAPTEQCSCSTCPYMKMNTLEKLYLALRDLSPAVELPKDLRRRAEA HHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHCC PLLRMLEQSQS HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA