| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is purA [H]
Identifier: 187736603
GI number: 187736603
Start: 2590141
End: 2591412
Strand: Direct
Name: purA [H]
Synonym: Amuc_2125
Alternate gene names: 187736603
Gene position: 2590141-2591412 (Clockwise)
Preceding gene: 187736602
Following gene: 187736605
Centisome position: 97.22
GC content: 59.51
Gene sequence:
>1272_bases ATGAATACCATTATTATCGGCTCCCAATGGGGCGACGAAGGCAAGGGCAAAATGATCGATTTCCTGACGGAATCCGCCGA CGTGGTGGCACGCGGCCAGGGCGGCAACAACGCCGGCCATACTGTAATTGCCAATGGAAAGAAATATATTCTCCACCTGG TTCCCTCCGGCATCCTGTGGCCGGACAAGCTTTGCGTCATCGGTAATGGTGTGGTGCTGGACCCCATCGGCCTGGTGGAG GAAATCAATGAACTCCGCGGCCAGGGCGTGACCATTACAAAAGACAACCTTCTTATCTCCGACCGCGCCCACGTGGTCCT TCCCTTCCACAAGGAAATGGACGCCGCCCAGGAATCCGCCCTCGGCAAAAAAGCCATCGGCACCACCAAGCGCGGCATCG GCCCCACTTACGCGGACAAGGCGCGCCGCATCGGCGTGCGCATGGCGGATATGAGGGATCCCGCGATTTTTGACGAAGTG CTGCGCCGCCGCATCAGGATGGCGAATGCGGAAATGGAACGCATGGGCCTTCCCGCTATGGATGAAGAAAAAATGGTGGC GGAAGTAAGCGCCGCCGCGGATGTGCTGCGCCCCCACATCACCAACACCATTCCGGTTATGCACGAAGCCGTGGCCTCCG GAAAAAGCATTCTCTTTGAAGGGGCCCAGGGAGCTTACCTGGATGTGGACTTCGGCACCTATCCGTTCGTCACCTCCTCC AACACCTCTTCCGCTGGCGCCTGCACCGGCACGGGTGTTCCTCCGCACAAAATTGACCGCATCATCGGCGTCTGCAAGGC CTACACCACCCGCGTGGGCGCAGGCCCCTTCGTCACGGAGGATGAAGACATCTCCAACCATCTGCACAGCATGGGCCGCG AATTCGGCGCCACCACGGGCCGCCCCCGCCGTTGCGGTTGGGCTGACGGCGTGCTGCTGCGCTTCTCCGCCATGTTCAAC GGTTTTGATGAAATGGCCATGACCAACCTGGACGGCTACGACAAGTGCCCGGAAATTAAAATCTGCACGGGTTACGATCT GGACGGGGAAATCCTGGCTTATCCGCCCGCCACAGTGGATGAATGGGAACGCTGCAAGCCCGTGTATGAAACGGTGCCCG GCTGGATGCAGGACATTTCCTCCTGCCGTTCCTGGGAAGAGATTCCGGAACAGGCCAAGAAATTCGTCAAACGCATGAGC GAGCTCATCGGCTGCCCCGTCACAACCGTGGGCGTAGGCCCCGACCGCGAACAGACGATTGCCGTGCAATAA
Upstream 100 bases:
>100_bases CCGGGCTTCCCGCCACTGGTCAGGAAAACTTAACAATTCCGTAAGATTGTCTTGCCATAAGGCAGGAATCTCATTAAGGT CTCCGAGTTCCATTTTTATC
Downstream 100 bases:
>100_bases ACCTCGGCAGTTCTCGTTATTATTTCCTTCAAAGCAGTTCCGCATGCATGGCGGAACTGCTTTTTTATTGTCAGCTAATA AAGGCCGAACACACGTTTCA
Product: Adenylosuccinate synthase
Products: NA
Alternate protein names: AMPSase; AdSS; IMP--aspartate ligase [H]
Number of amino acids: Translated: 423; Mature: 423
Protein sequence:
>423_residues MNTIIIGSQWGDEGKGKMIDFLTESADVVARGQGGNNAGHTVIANGKKYILHLVPSGILWPDKLCVIGNGVVLDPIGLVE EINELRGQGVTITKDNLLISDRAHVVLPFHKEMDAAQESALGKKAIGTTKRGIGPTYADKARRIGVRMADMRDPAIFDEV LRRRIRMANAEMERMGLPAMDEEKMVAEVSAAADVLRPHITNTIPVMHEAVASGKSILFEGAQGAYLDVDFGTYPFVTSS NTSSAGACTGTGVPPHKIDRIIGVCKAYTTRVGAGPFVTEDEDISNHLHSMGREFGATTGRPRRCGWADGVLLRFSAMFN GFDEMAMTNLDGYDKCPEIKICTGYDLDGEILAYPPATVDEWERCKPVYETVPGWMQDISSCRSWEEIPEQAKKFVKRMS ELIGCPVTTVGVGPDREQTIAVQ
Sequences:
>Translated_423_residues MNTIIIGSQWGDEGKGKMIDFLTESADVVARGQGGNNAGHTVIANGKKYILHLVPSGILWPDKLCVIGNGVVLDPIGLVE EINELRGQGVTITKDNLLISDRAHVVLPFHKEMDAAQESALGKKAIGTTKRGIGPTYADKARRIGVRMADMRDPAIFDEV LRRRIRMANAEMERMGLPAMDEEKMVAEVSAAADVLRPHITNTIPVMHEAVASGKSILFEGAQGAYLDVDFGTYPFVTSS NTSSAGACTGTGVPPHKIDRIIGVCKAYTTRVGAGPFVTEDEDISNHLHSMGREFGATTGRPRRCGWADGVLLRFSAMFN GFDEMAMTNLDGYDKCPEIKICTGYDLDGEILAYPPATVDEWERCKPVYETVPGWMQDISSCRSWEEIPEQAKKFVKRMS ELIGCPVTTVGVGPDREQTIAVQ >Mature_423_residues MNTIIIGSQWGDEGKGKMIDFLTESADVVARGQGGNNAGHTVIANGKKYILHLVPSGILWPDKLCVIGNGVVLDPIGLVE EINELRGQGVTITKDNLLISDRAHVVLPFHKEMDAAQESALGKKAIGTTKRGIGPTYADKARRIGVRMADMRDPAIFDEV LRRRIRMANAEMERMGLPAMDEEKMVAEVSAAADVLRPHITNTIPVMHEAVASGKSILFEGAQGAYLDVDFGTYPFVTSS NTSSAGACTGTGVPPHKIDRIIGVCKAYTTRVGAGPFVTEDEDISNHLHSMGREFGATTGRPRRCGWADGVLLRFSAMFN GFDEMAMTNLDGYDKCPEIKICTGYDLDGEILAYPPATVDEWERCKPVYETVPGWMQDISSCRSWEEIPEQAKKFVKRMS ELIGCPVTTVGVGPDREQTIAVQ
Specific function: Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP [H]
COG id: COG0104
COG function: function code F; Adenylosuccinate synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenylosuccinate synthetase family [H]
Homologues:
Organism=Homo sapiens, GI22748717, Length=425, Percent_Identity=44.7058823529412, Blast_Score=372, Evalue=1e-103, Organism=Homo sapiens, GI34577063, Length=427, Percent_Identity=44.9648711943794, Blast_Score=369, Evalue=1e-102, Organism=Homo sapiens, GI40316944, Length=395, Percent_Identity=43.7974683544304, Blast_Score=328, Evalue=6e-90, Organism=Escherichia coli, GI1790620, Length=425, Percent_Identity=42.8235294117647, Blast_Score=375, Evalue=1e-105, Organism=Caenorhabditis elegans, GI25146555, Length=430, Percent_Identity=44.8837209302326, Blast_Score=362, Evalue=1e-100, Organism=Caenorhabditis elegans, GI25146553, Length=430, Percent_Identity=44.8837209302326, Blast_Score=362, Evalue=1e-100, Organism=Saccharomyces cerevisiae, GI6324109, Length=428, Percent_Identity=42.2897196261682, Blast_Score=365, Evalue=1e-102, Organism=Drosophila melanogaster, GI21356033, Length=425, Percent_Identity=44.2352941176471, Blast_Score=363, Evalue=1e-100,
Paralogues:
None
Copy number: 940 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018220 - InterPro: IPR001114 [H]
Pfam domain/function: PF00709 Adenylsucc_synt [H]
EC number: =6.3.4.4 [H]
Molecular weight: Translated: 46048; Mature: 46048
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: PS01266 ADENYLOSUCCIN_SYN_1 ; PS00513 ADENYLOSUCCIN_SYN_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTIIIGSQWGDEGKGKMIDFLTESADVVARGQGGNNAGHTVIANGKKYILHLVPSGILW CCEEEEECCCCCCCCCCCHHHHHCCCCEEEECCCCCCCCCEEEECCCEEEEEECCCCCCC PDKLCVIGNGVVLDPIGLVEEINELRGQGVTITKDNLLISDRAHVVLPFHKEMDAAQESA CCCEEEECCCEEECCHHHHHHHHHHCCCCEEEECCCEEEECCCEEEEECHHHHHHHHHHH LGKKAIGTTKRGIGPTYADKARRIGVRMADMRDPAIFDEVLRRRIRMANAEMERMGLPAM CCHHHCCCCCCCCCCCHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHCCHHHHCCCCCC DEEKMVAEVSAAADVLRPHITNTIPVMHEAVASGKSILFEGAQGAYLDVDFGTYPFVTSS CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEECCCCCEEEECCCCCCEEECC NTSSAGACTGTGVPPHKIDRIIGVCKAYTTRVGAGPFVTEDEDISNHLHSMGREFGATTG CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCC RPRRCGWADGVLLRFSAMFNGFDEMAMTNLDGYDKCPEIKICTGYDLDGEILAYPPATVD CCCCCCCCCHHHHHHHHHHCCHHHHHHCCCCCCCCCCCEEEEECCCCCCCEEECCCCCCC EWERCKPVYETVPGWMQDISSCRSWEEIPEQAKKFVKRMSELIGCPVTTVGVGPDREQTI HHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEE AVQ ECC >Mature Secondary Structure MNTIIIGSQWGDEGKGKMIDFLTESADVVARGQGGNNAGHTVIANGKKYILHLVPSGILW CCEEEEECCCCCCCCCCCHHHHHCCCCEEEECCCCCCCCCEEEECCCEEEEEECCCCCCC PDKLCVIGNGVVLDPIGLVEEINELRGQGVTITKDNLLISDRAHVVLPFHKEMDAAQESA CCCEEEECCCEEECCHHHHHHHHHHCCCCEEEECCCEEEECCCEEEEECHHHHHHHHHHH LGKKAIGTTKRGIGPTYADKARRIGVRMADMRDPAIFDEVLRRRIRMANAEMERMGLPAM CCHHHCCCCCCCCCCCHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHCCHHHHCCCCCC DEEKMVAEVSAAADVLRPHITNTIPVMHEAVASGKSILFEGAQGAYLDVDFGTYPFVTSS CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEECCCCCEEEECCCCCCEEECC NTSSAGACTGTGVPPHKIDRIIGVCKAYTTRVGAGPFVTEDEDISNHLHSMGREFGATTG CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCC RPRRCGWADGVLLRFSAMFNGFDEMAMTNLDGYDKCPEIKICTGYDLDGEILAYPPATVD CCCCCCCCCHHHHHHHHHHCCHHHHHHCCCCCCCCCCCEEEEECCCCCCCEEECCCCCCC EWERCKPVYETVPGWMQDISSCRSWEEIPEQAKKFVKRMSELIGCPVTTVGVGPDREQTI HHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEE AVQ ECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA