Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

Click here to switch to the map view.

The map label for this gene is 187736583

Identifier: 187736583

GI number: 187736583

Start: 2560568

End: 2561392

Strand: Direct

Name: 187736583

Synonym: Amuc_2105

Alternate gene names: NA

Gene position: 2560568-2561392 (Clockwise)

Preceding gene: 187736582

Following gene: 187736585

Centisome position: 96.11

GC content: 55.88

Gene sequence:

>825_bases
ATGAATGGAACCTTCCCATCCGGCGGTCTCGCAACCGCCAATGGCAAGCCTTTTTTCTGGAAACCGGTGCATGGGCTGTG
CGTCAACACAAAGTCCATACGAAACATGATGAGTAAAAAACAACTGCTATTACTGCTGCCGGCCCTGTTTGCGGCCATTT
CAACCCTTCCTGCAAATGCGGCCCACATCCTTACGGGAGGAGGAACCGGAGCTGTAAATGCCAGCGGTACAGGCATCTCC
ATGCAACTGAACCAGGGCTTTACTTCTGATACTGCCCTGCCCGGAGCCGTGAACCTCGACTCCATACAGCTCAAGCTGAC
GGACAACCGGTTTACCGCGGACTTCACATCCGGCAGCCTTACCATGGTGGTATTCACCAAACCGGCGTCGGACAGCGCGG
ACTGGACGGTCGTCGGGCAATCCCGCACGGAAGAAAACCTCTCCGTGAATATCGGCTCCTACACCGACGTCGAATTTACC
TTCAGCAACCTCCTTCTGAACACATCGCAGGAATACGTCTTCGCCTTCGTTTCTGACGCCGCCATGCTGGGCAGGCTGAC
AATAGGCACGAGCCTTCAGGCGGAAGAGGGAGCTGACTCCCCATTCAGCGTAGACAACGGATTTGCCTACGCCTCCATGC
AGTCAACAGCCTTTTACAGCGGGGCTCCCGTCATACTCTACTACAATACGGGCAACGAAACGAGCATGTACTTCCCGAAC
ATGATCGTTACCGTCACCGACCCCGAAAGCGTCCCCGAACCGGCTTCATGCCTGCTTGTCACGCTGTCGTGCGCGGGCCT
GCTCGTCTCACGCAGAAGAAGATAA

Upstream 100 bases:

>100_bases
TCATATCCGCTTTGGATAAGGAGCGCCCCATTCACGGCGTCCTCTGTTATTTCCGGTTCCATGTCTCAACCGGACTTTCC
TGTTTCCGGTATCCCCCTGA

Downstream 100 bases:

>100_bases
CCTCGAACCGCCAAACTACTGGAATATCCGGTACGGCTACGGCCTTCTGCGATTTTCCCAACTGCCTTTCGCGCGGAGGG
AAAAGCCGTACCGAGTCATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MNGTFPSGGLATANGKPFFWKPVHGLCVNTKSIRNMMSKKQLLLLLPALFAAISTLPANAAHILTGGGTGAVNASGTGIS
MQLNQGFTSDTALPGAVNLDSIQLKLTDNRFTADFTSGSLTMVVFTKPASDSADWTVVGQSRTEENLSVNIGSYTDVEFT
FSNLLLNTSQEYVFAFVSDAAMLGRLTIGTSLQAEEGADSPFSVDNGFAYASMQSTAFYSGAPVILYYNTGNETSMYFPN
MIVTVTDPESVPEPASCLLVTLSCAGLLVSRRRR

Sequences:

>Translated_274_residues
MNGTFPSGGLATANGKPFFWKPVHGLCVNTKSIRNMMSKKQLLLLLPALFAAISTLPANAAHILTGGGTGAVNASGTGIS
MQLNQGFTSDTALPGAVNLDSIQLKLTDNRFTADFTSGSLTMVVFTKPASDSADWTVVGQSRTEENLSVNIGSYTDVEFT
FSNLLLNTSQEYVFAFVSDAAMLGRLTIGTSLQAEEGADSPFSVDNGFAYASMQSTAFYSGAPVILYYNTGNETSMYFPN
MIVTVTDPESVPEPASCLLVTLSCAGLLVSRRRR
>Mature_274_residues
MNGTFPSGGLATANGKPFFWKPVHGLCVNTKSIRNMMSKKQLLLLLPALFAAISTLPANAAHILTGGGTGAVNASGTGIS
MQLNQGFTSDTALPGAVNLDSIQLKLTDNRFTADFTSGSLTMVVFTKPASDSADWTVVGQSRTEENLSVNIGSYTDVEFT
FSNLLLNTSQEYVFAFVSDAAMLGRLTIGTSLQAEEGADSPFSVDNGFAYASMQSTAFYSGAPVILYYNTGNETSMYFPN
MIVTVTDPESVPEPASCLLVTLSCAGLLVSRRRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29053; Mature: 29053

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGTFPSGGLATANGKPFFWKPVHGLCVNTKSIRNMMSKKQLLLLLPALFAAISTLPANA
CCCCCCCCCEECCCCCCEEEECCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
AHILTGGGTGAVNASGTGISMQLNQGFTSDTALPGAVNLDSIQLKLTDNRFTADFTSGSL
EEEEECCCCCEEECCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCEEEEEECCCCE
TMVVFTKPASDSADWTVVGQSRTEENLSVNIGSYTDVEFTFSNLLLNTSQEYVFAFVSDA
EEEEEECCCCCCCCEEEEECCCCCCCEEEEECCEEEEEEEEEHEEECCCCCEEEEEECCH
AMLGRLTIGTSLQAEEGADSPFSVDNGFAYASMQSTAFYSGAPVILYYNTGNETSMYFPN
HHEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCEEECCCCEEEEEECCCCCEEECCE
MIVTVTDPESVPEPASCLLVTLSCAGLLVSRRRR
EEEEEECCCCCCCCHHHEEEHHHHHHHHHHHCCC
>Mature Secondary Structure
MNGTFPSGGLATANGKPFFWKPVHGLCVNTKSIRNMMSKKQLLLLLPALFAAISTLPANA
CCCCCCCCCEECCCCCCEEEECCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
AHILTGGGTGAVNASGTGISMQLNQGFTSDTALPGAVNLDSIQLKLTDNRFTADFTSGSL
EEEEECCCCCEEECCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCEEEEEECCCCE
TMVVFTKPASDSADWTVVGQSRTEENLSVNIGSYTDVEFTFSNLLLNTSQEYVFAFVSDA
EEEEEECCCCCCCCEEEEECCCCCCCEEEEECCEEEEEEEEEHEEECCCCCEEEEEECCH
AMLGRLTIGTSLQAEEGADSPFSVDNGFAYASMQSTAFYSGAPVILYYNTGNETSMYFPN
HHEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCEEECCCCEEEEEECCCCCEEECCE
MIVTVTDPESVPEPASCLLVTLSCAGLLVSRRRR
EEEEEECCCCCCCCHHHEEEHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA