| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187736583
Identifier: 187736583
GI number: 187736583
Start: 2560568
End: 2561392
Strand: Direct
Name: 187736583
Synonym: Amuc_2105
Alternate gene names: NA
Gene position: 2560568-2561392 (Clockwise)
Preceding gene: 187736582
Following gene: 187736585
Centisome position: 96.11
GC content: 55.88
Gene sequence:
>825_bases ATGAATGGAACCTTCCCATCCGGCGGTCTCGCAACCGCCAATGGCAAGCCTTTTTTCTGGAAACCGGTGCATGGGCTGTG CGTCAACACAAAGTCCATACGAAACATGATGAGTAAAAAACAACTGCTATTACTGCTGCCGGCCCTGTTTGCGGCCATTT CAACCCTTCCTGCAAATGCGGCCCACATCCTTACGGGAGGAGGAACCGGAGCTGTAAATGCCAGCGGTACAGGCATCTCC ATGCAACTGAACCAGGGCTTTACTTCTGATACTGCCCTGCCCGGAGCCGTGAACCTCGACTCCATACAGCTCAAGCTGAC GGACAACCGGTTTACCGCGGACTTCACATCCGGCAGCCTTACCATGGTGGTATTCACCAAACCGGCGTCGGACAGCGCGG ACTGGACGGTCGTCGGGCAATCCCGCACGGAAGAAAACCTCTCCGTGAATATCGGCTCCTACACCGACGTCGAATTTACC TTCAGCAACCTCCTTCTGAACACATCGCAGGAATACGTCTTCGCCTTCGTTTCTGACGCCGCCATGCTGGGCAGGCTGAC AATAGGCACGAGCCTTCAGGCGGAAGAGGGAGCTGACTCCCCATTCAGCGTAGACAACGGATTTGCCTACGCCTCCATGC AGTCAACAGCCTTTTACAGCGGGGCTCCCGTCATACTCTACTACAATACGGGCAACGAAACGAGCATGTACTTCCCGAAC ATGATCGTTACCGTCACCGACCCCGAAAGCGTCCCCGAACCGGCTTCATGCCTGCTTGTCACGCTGTCGTGCGCGGGCCT GCTCGTCTCACGCAGAAGAAGATAA
Upstream 100 bases:
>100_bases TCATATCCGCTTTGGATAAGGAGCGCCCCATTCACGGCGTCCTCTGTTATTTCCGGTTCCATGTCTCAACCGGACTTTCC TGTTTCCGGTATCCCCCTGA
Downstream 100 bases:
>100_bases CCTCGAACCGCCAAACTACTGGAATATCCGGTACGGCTACGGCCTTCTGCGATTTTCCCAACTGCCTTTCGCGCGGAGGG AAAAGCCGTACCGAGTCATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MNGTFPSGGLATANGKPFFWKPVHGLCVNTKSIRNMMSKKQLLLLLPALFAAISTLPANAAHILTGGGTGAVNASGTGIS MQLNQGFTSDTALPGAVNLDSIQLKLTDNRFTADFTSGSLTMVVFTKPASDSADWTVVGQSRTEENLSVNIGSYTDVEFT FSNLLLNTSQEYVFAFVSDAAMLGRLTIGTSLQAEEGADSPFSVDNGFAYASMQSTAFYSGAPVILYYNTGNETSMYFPN MIVTVTDPESVPEPASCLLVTLSCAGLLVSRRRR
Sequences:
>Translated_274_residues MNGTFPSGGLATANGKPFFWKPVHGLCVNTKSIRNMMSKKQLLLLLPALFAAISTLPANAAHILTGGGTGAVNASGTGIS MQLNQGFTSDTALPGAVNLDSIQLKLTDNRFTADFTSGSLTMVVFTKPASDSADWTVVGQSRTEENLSVNIGSYTDVEFT FSNLLLNTSQEYVFAFVSDAAMLGRLTIGTSLQAEEGADSPFSVDNGFAYASMQSTAFYSGAPVILYYNTGNETSMYFPN MIVTVTDPESVPEPASCLLVTLSCAGLLVSRRRR >Mature_274_residues MNGTFPSGGLATANGKPFFWKPVHGLCVNTKSIRNMMSKKQLLLLLPALFAAISTLPANAAHILTGGGTGAVNASGTGIS MQLNQGFTSDTALPGAVNLDSIQLKLTDNRFTADFTSGSLTMVVFTKPASDSADWTVVGQSRTEENLSVNIGSYTDVEFT FSNLLLNTSQEYVFAFVSDAAMLGRLTIGTSLQAEEGADSPFSVDNGFAYASMQSTAFYSGAPVILYYNTGNETSMYFPN MIVTVTDPESVPEPASCLLVTLSCAGLLVSRRRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29053; Mature: 29053
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGTFPSGGLATANGKPFFWKPVHGLCVNTKSIRNMMSKKQLLLLLPALFAAISTLPANA CCCCCCCCCEECCCCCCEEEECCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC AHILTGGGTGAVNASGTGISMQLNQGFTSDTALPGAVNLDSIQLKLTDNRFTADFTSGSL EEEEECCCCCEEECCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCEEEEEECCCCE TMVVFTKPASDSADWTVVGQSRTEENLSVNIGSYTDVEFTFSNLLLNTSQEYVFAFVSDA EEEEEECCCCCCCCEEEEECCCCCCCEEEEECCEEEEEEEEEHEEECCCCCEEEEEECCH AMLGRLTIGTSLQAEEGADSPFSVDNGFAYASMQSTAFYSGAPVILYYNTGNETSMYFPN HHEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCEEECCCCEEEEEECCCCCEEECCE MIVTVTDPESVPEPASCLLVTLSCAGLLVSRRRR EEEEEECCCCCCCCHHHEEEHHHHHHHHHHHCCC >Mature Secondary Structure MNGTFPSGGLATANGKPFFWKPVHGLCVNTKSIRNMMSKKQLLLLLPALFAAISTLPANA CCCCCCCCCEECCCCCCEEEECCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC AHILTGGGTGAVNASGTGISMQLNQGFTSDTALPGAVNLDSIQLKLTDNRFTADFTSGSL EEEEECCCCCEEECCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCEEEEEECCCCE TMVVFTKPASDSADWTVVGQSRTEENLSVNIGSYTDVEFTFSNLLLNTSQEYVFAFVSDA EEEEEECCCCCCCCEEEEECCCCCCCEEEEECCEEEEEEEEEHEEECCCCCEEEEEECCH AMLGRLTIGTSLQAEEGADSPFSVDNGFAYASMQSTAFYSGAPVILYYNTGNETSMYFPN HHEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCEEECCCCEEEEEECCCCCEEECCE MIVTVTDPESVPEPASCLLVTLSCAGLLVSRRRR EEEEEECCCCCCCCHHHEEEHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA