| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187735143
Identifier: 187735143
GI number: 187735143
Start: 750079
End: 751239
Strand: Direct
Name: 187735143
Synonym: Amuc_0637
Alternate gene names: NA
Gene position: 750079-751239 (Clockwise)
Preceding gene: 187735141
Following gene: 187735144
Centisome position: 28.16
GC content: 54.09
Gene sequence:
>1161_bases ATGGCTGCCTATGAAATGGCCTGCAGCCTGAGCTCCCTGGACTGGGATATCCACGTCCTCACCCGCCCGCTGGATTCACC GGATGAGTCCTTCCGCTCCCACCAATACAGCCCTCTCACAACCCTGCCGGACACCCTGACGAAGGACAGTGCCCGTTTAA GGGAATACCTGGACGGGTTTCTGAAAGATTTCCGGCCGGATGTTATTATCTACCACTCCTGGGCGGACTGGTGCCGGGAA GAATTGCTGGACGCGGCACGGGATTCAGGCATTCCGTTTTTCCTCCGCTCCCATGGTGCAGCTACCAATTTCCGCTCTTT TTTCCGCTTCAATTACCCTCCTTTCTTCGGCCTGAAAAAATGGCTCTGCTCCTTTTTTCAAGTACGCAGGGATATCCTCA ACGTATGCCGGAAATCACCGTTAAACCGTCTCGTTTTTCTCGATCCTTACGGGACACTGTTCAAGAGCTTTGATTATTAC TGCGCATCCAGAAGCAAACTTGCCCATTACTCCTGCATTCCCAACACATTCCCGGCTCTGAAAAGAACCGCTCCTTTTTT CCGGGAAAAATACGGACTTTCCTCCGCCCCCGTTTTTACCTGCCCTGCCGGCGCCAGCATGAGGAAACGGCAGCTTCTCT TCATCCGCCATGTGAAACGCTCCCGTCTGCGGCATATCATTTTTCTTTTTCTGATTCCCCAGCACAATGCCTACGCGGAA CAAATGGAACAAGCCATCGGGGATGACCCCAGATTCAGGATTCTCTACAGGCTCCCCCGTTTGGAAGTAGAAGCCGCCAT TATGGAAAGCGATGCCGTTTTCCTTTACTCTTATCAGGAACAGCAGCCCCTCTCCATTCTGGAGGCGATGTCATGCGGCG TTCCCTGGTTCGCTCCGGACGCAGGAGCTCTTTCCACCCTGGAGGGGGGAATCGTCCTGAAAAACACTTCCCCCTCCGTG CTGGAAAAAGCCGTGGAATCGTTGACGGACGAAAAAACACGCAAACTACTGGGGAGTAAAGGCCGCCGGCAATGGGAAGC CTGTTTCGCCCCCGACGCAGTAAACCAGGAATGGGAGCAACTGCTTTTTTCCTCCATCCGCCCGGAAGGAAAGCCTCCGT TCGCGTCTTCCATCGTCCGGGAGCATTTACCCACCTGCTAA
Upstream 100 bases:
>100_bases CTTGTTTTATTTTTTCTTTTCATCTACATTACCGCCCGTGAGCAAGGGCAGGGTTCTCATCGTTACATATGTTTTTCCTC CGGAGGAAGGAGGCGTAGGC
Downstream 100 bases:
>100_bases CCTTGCCTCCTCTTTCCAATCCATGCCGATCAAACGCCTCCGTCCCGTATTAGCCATAGCAGCGGACCTCCCTCTGGGCC GGCTGCTGACGTCTTTCCGT
Product: glycosyl transferase group 1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 386; Mature: 385
Protein sequence:
>386_residues MAAYEMACSLSSLDWDIHVLTRPLDSPDESFRSHQYSPLTTLPDTLTKDSARLREYLDGFLKDFRPDVIIYHSWADWCRE ELLDAARDSGIPFFLRSHGAATNFRSFFRFNYPPFFGLKKWLCSFFQVRRDILNVCRKSPLNRLVFLDPYGTLFKSFDYY CASRSKLAHYSCIPNTFPALKRTAPFFREKYGLSSAPVFTCPAGASMRKRQLLFIRHVKRSRLRHIIFLFLIPQHNAYAE QMEQAIGDDPRFRILYRLPRLEVEAAIMESDAVFLYSYQEQQPLSILEAMSCGVPWFAPDAGALSTLEGGIVLKNTSPSV LEKAVESLTDEKTRKLLGSKGRRQWEACFAPDAVNQEWEQLLFSSIRPEGKPPFASSIVREHLPTC
Sequences:
>Translated_386_residues MAAYEMACSLSSLDWDIHVLTRPLDSPDESFRSHQYSPLTTLPDTLTKDSARLREYLDGFLKDFRPDVIIYHSWADWCRE ELLDAARDSGIPFFLRSHGAATNFRSFFRFNYPPFFGLKKWLCSFFQVRRDILNVCRKSPLNRLVFLDPYGTLFKSFDYY CASRSKLAHYSCIPNTFPALKRTAPFFREKYGLSSAPVFTCPAGASMRKRQLLFIRHVKRSRLRHIIFLFLIPQHNAYAE QMEQAIGDDPRFRILYRLPRLEVEAAIMESDAVFLYSYQEQQPLSILEAMSCGVPWFAPDAGALSTLEGGIVLKNTSPSV LEKAVESLTDEKTRKLLGSKGRRQWEACFAPDAVNQEWEQLLFSSIRPEGKPPFASSIVREHLPTC >Mature_385_residues AAYEMACSLSSLDWDIHVLTRPLDSPDESFRSHQYSPLTTLPDTLTKDSARLREYLDGFLKDFRPDVIIYHSWADWCREE LLDAARDSGIPFFLRSHGAATNFRSFFRFNYPPFFGLKKWLCSFFQVRRDILNVCRKSPLNRLVFLDPYGTLFKSFDYYC ASRSKLAHYSCIPNTFPALKRTAPFFREKYGLSSAPVFTCPAGASMRKRQLLFIRHVKRSRLRHIIFLFLIPQHNAYAEQ MEQAIGDDPRFRILYRLPRLEVEAAIMESDAVFLYSYQEQQPLSILEAMSCGVPWFAPDAGALSTLEGGIVLKNTSPSVL EKAVESLTDEKTRKLLGSKGRRQWEACFAPDAVNQEWEQLLFSSIRPEGKPPFASSIVREHLPTC
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44447; Mature: 44316
Theoretical pI: Translated: 8.53; Mature: 8.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAYEMACSLSSLDWDIHVLTRPLDSPDESFRSHQYSPLTTLPDTLTKDSARLREYLDGF CCHHHHHHHHHCCCCEEEEEECCCCCCHHHHHCCCCCCCCCCCHHHCCCHHHHHHHHHHH LKDFRPDVIIYHSWADWCREELLDAARDSGIPFFLRSHGAATNFRSFFRFNYPPFFGLKK HHHCCCCEEEEECHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCCCHHHHHH WLCSFFQVRRDILNVCRKSPLNRLVFLDPYGTLFKSFDYYCASRSKLAHYSCIPNTFPAL HHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHCCCCCHHHCCCCCCHHHH KRTAPFFREKYGLSSAPVFTCPAGASMRKRQLLFIRHVKRSRLRHIIFLFLIPQHNAYAE HHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCCHHHH QMEQAIGDDPRFRILYRLPRLEVEAAIMESDAVFLYSYQEQQPLSILEAMSCGVPWFAPD HHHHHHCCCCCEEEEECCCCHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCC AGALSTLEGGIVLKNTSPSVLEKAVESLTDEKTRKLLGSKGRRQWEACFAPDAVNQEWEQ CCCHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHH LLFSSIRPEGKPPFASSIVREHLPTC HHHHHCCCCCCCCHHHHHHHHHCCCC >Mature Secondary Structure AAYEMACSLSSLDWDIHVLTRPLDSPDESFRSHQYSPLTTLPDTLTKDSARLREYLDGF CHHHHHHHHHCCCCEEEEEECCCCCCHHHHHCCCCCCCCCCCHHHCCCHHHHHHHHHHH LKDFRPDVIIYHSWADWCREELLDAARDSGIPFFLRSHGAATNFRSFFRFNYPPFFGLKK HHHCCCCEEEEECHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCCCHHHHHH WLCSFFQVRRDILNVCRKSPLNRLVFLDPYGTLFKSFDYYCASRSKLAHYSCIPNTFPAL HHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHCCCCCHHHCCCCCCHHHH KRTAPFFREKYGLSSAPVFTCPAGASMRKRQLLFIRHVKRSRLRHIIFLFLIPQHNAYAE HHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCCHHHH QMEQAIGDDPRFRILYRLPRLEVEAAIMESDAVFLYSYQEQQPLSILEAMSCGVPWFAPD HHHHHHCCCCCEEEEECCCCHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCC AGALSTLEGGIVLKNTSPSVLEKAVESLTDEKTRKLLGSKGRRQWEACFAPDAVNQEWEQ CCCHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHH LLFSSIRPEGKPPFASSIVREHLPTC HHHHHCCCCCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA